co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G48330

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043392: negative regulation of DNA binding	0.00E+00
2	GO:0022622: root system development	1.86E-04
3	GO:0009959: negative gravitropism	2.97E-04
4	GO:0048509: regulation of meristem development	3.57E-04
5	GO:2000033: regulation of seed dormancy process	3.57E-04
6	GO:0032880: regulation of protein localization	4.19E-04
7	GO:0010161: red light signaling pathway	4.19E-04
8	GO:0010100: negative regulation of photomorphogenesis	5.50E-04
9	GO:0010099: regulation of photomorphogenesis	5.50E-04
10	GO:0010206: photosystem II repair	6.19E-04
11	GO:0006783: heme biosynthetic process	6.19E-04
12	GO:2000012: regulation of auxin polar transport	9.90E-04
13	GO:0006541: glutamine metabolic process	1.07E-03
14	GO:0000162: tryptophan biosynthetic process	1.23E-03
15	GO:0006338: chromatin remodeling	1.32E-03
16	GO:0010187: negative regulation of seed germination	1.32E-03
17	GO:0048278: vesicle docking	1.50E-03
18	GO:0019748: secondary metabolic process	1.59E-03
19	GO:0009686: gibberellin biosynthetic process	1.68E-03
20	GO:0008284: positive regulation of cell proliferation	1.88E-03
21	GO:0009958: positive gravitropism	2.08E-03
22	GO:0009741: response to brassinosteroid	2.08E-03
23	GO:0009960: endosperm development	2.08E-03
24	GO:0061025: membrane fusion	2.18E-03
25	GO:1901657: glycosyl compound metabolic process	2.61E-03
26	GO:0010029: regulation of seed germination	3.19E-03
27	GO:0006906: vesicle fusion	3.31E-03
28	GO:0015995: chlorophyll biosynthetic process	3.43E-03
29	GO:0000160: phosphorelay signal transduction system	3.80E-03
30	GO:0048527: lateral root development	4.06E-03
31	GO:0009735: response to cytokinin	4.31E-03
32	GO:0006887: exocytosis	4.86E-03
33	GO:0042542: response to hydrogen peroxide	4.99E-03
34	GO:0009640: photomorphogenesis	5.13E-03
35	GO:0009644: response to high light intensity	5.42E-03
36	GO:0009736: cytokinin-activated signaling pathway	6.31E-03
37	GO:0006857: oligopeptide transport	6.61E-03
38	GO:0009740: gibberellic acid mediated signaling pathway	7.72E-03
39	GO:0007623: circadian rhythm	1.18E-02
40	GO:0009739: response to gibberellin	1.28E-02
41	GO:0009617: response to bacterium	1.34E-02
42	GO:0044550: secondary metabolite biosynthetic process	1.99E-02
43	GO:0045892: negative regulation of transcription, DNA-templated	2.15E-02
44	GO:0006886: intracellular protein transport	2.18E-02
45	GO:0016042: lipid catabolic process	2.42E-02
46	GO:0009408: response to heat	2.47E-02
47	GO:0008152: metabolic process	2.65E-02
48	GO:0006508: proteolysis	2.94E-02
49	GO:0006457: protein folding	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0097100: supercoiled DNA binding	0.00E+00
2	GO:0090711: FMN hydrolase activity	0.00E+00
3	GO:0010313: phytochrome binding	1.97E-05
4	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	5.10E-05
5	GO:0004049: anthranilate synthase activity	9.05E-05
6	GO:0080030: methyl indole-3-acetate esterase activity	2.97E-04
7	GO:0008083: growth factor activity	1.07E-03
8	GO:0000156: phosphorelay response regulator activity	2.61E-03
9	GO:0102483: scopolin beta-glucosidase activity	3.43E-03
10	GO:0008236: serine-type peptidase activity	3.55E-03
11	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.06E-03
12	GO:0008422: beta-glucosidase activity	4.58E-03
13	GO:0000149: SNARE binding	4.58E-03
14	GO:0004185: serine-type carboxypeptidase activity	5.13E-03
15	GO:0005484: SNAP receptor activity	5.13E-03
16	GO:0043621: protein self-association	5.42E-03
17	GO:0016298: lipase activity	6.46E-03
18	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	7.24E-03
19	GO:0004386: helicase activity	8.56E-03
20	GO:0004252: serine-type endopeptidase activity	1.01E-02
21	GO:0042802: identical protein binding	1.40E-02
22	GO:0016788: hydrolase activity, acting on ester bonds	1.63E-02
23	GO:0050660: flavin adenine dinucleotide binding	1.78E-02
24	GO:0008233: peptidase activity	1.85E-02
25	GO:0016787: hydrolase activity	2.05E-02
26	GO:0042803: protein homodimerization activity	2.20E-02
27	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.25E-02
28	GO:0009055: electron carrier activity	2.60E-02
29	GO:0030246: carbohydrate binding	4.60E-02
30	GO:0019825: oxygen binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0031011: Ino80 complex	2.40E-04
2	GO:0009507: chloroplast	4.08E-03
3	GO:0031977: thylakoid lumen	4.86E-03
4	GO:0031201: SNARE complex	4.86E-03
5	GO:0012505: endomembrane system	7.89E-03
6	GO:0009543: chloroplast thylakoid lumen	9.42E-03
7	GO:0005615: extracellular space	1.28E-02
8	GO:0009579: thylakoid	4.23E-02
9	GO:0009534: chloroplast thylakoid	4.26E-02