co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G48200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0071985: multivesicular body sorting pathway	0.00E+00
3	GO:0090400: stress-induced premature senescence	0.00E+00
4	GO:0080149: sucrose induced translational repression	0.00E+00
5	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
6	GO:0010407: non-classical arabinogalactan protein metabolic process	0.00E+00
7	GO:0002084: protein depalmitoylation	0.00E+00
8	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
9	GO:1904250: positive regulation of age-related resistance	0.00E+00
10	GO:0016192: vesicle-mediated transport	5.11E-09
11	GO:0006886: intracellular protein transport	3.35E-05
12	GO:0006605: protein targeting	1.20E-04
13	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.62E-04
14	GO:0019478: D-amino acid catabolic process	1.62E-04
15	GO:0006680: glucosylceramide catabolic process	1.62E-04
16	GO:1900384: regulation of flavonol biosynthetic process	1.62E-04
17	GO:0015709: thiosulfate transport	3.69E-04
18	GO:0071422: succinate transmembrane transport	3.69E-04
19	GO:0009805: coumarin biosynthetic process	3.69E-04
20	GO:0042853: L-alanine catabolic process	3.69E-04
21	GO:0080026: response to indolebutyric acid	3.69E-04
22	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.69E-04
23	GO:0055046: microgametogenesis	3.96E-04
24	GO:0007033: vacuole organization	5.00E-04
25	GO:0072661: protein targeting to plasma membrane	6.04E-04
26	GO:0006517: protein deglycosylation	6.04E-04
27	GO:0010272: response to silver ion	6.04E-04
28	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	6.04E-04
29	GO:0009062: fatty acid catabolic process	6.04E-04
30	GO:0044375: regulation of peroxisome size	6.04E-04
31	GO:0009636: response to toxic substance	6.27E-04
32	GO:0015729: oxaloacetate transport	8.63E-04
33	GO:0080024: indolebutyric acid metabolic process	8.63E-04
34	GO:1902584: positive regulation of response to water deprivation	1.14E-03
35	GO:0010363: regulation of plant-type hypersensitive response	1.14E-03
36	GO:0006621: protein retention in ER lumen	1.14E-03
37	GO:0015031: protein transport	1.44E-03
38	GO:0045927: positive regulation of growth	1.45E-03
39	GO:0071423: malate transmembrane transport	1.45E-03
40	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.45E-03
41	GO:0006555: methionine metabolic process	1.78E-03
42	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.78E-03
43	GO:0035435: phosphate ion transmembrane transport	1.78E-03
44	GO:0080113: regulation of seed growth	2.14E-03
45	GO:0019509: L-methionine salvage from methylthioadenosine	2.14E-03
46	GO:0034389: lipid particle organization	2.14E-03
47	GO:0017148: negative regulation of translation	2.14E-03
48	GO:0006906: vesicle fusion	2.35E-03
49	GO:0006744: ubiquinone biosynthetic process	2.52E-03
50	GO:0080186: developmental vegetative growth	2.52E-03
51	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.52E-03
52	GO:0008272: sulfate transport	2.52E-03
53	GO:1900057: positive regulation of leaf senescence	2.52E-03
54	GO:1902074: response to salt	2.52E-03
55	GO:0006102: isocitrate metabolic process	2.91E-03
56	GO:0016559: peroxisome fission	2.91E-03
57	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.91E-03
58	GO:0006491: N-glycan processing	2.91E-03
59	GO:0043068: positive regulation of programmed cell death	2.91E-03
60	GO:0009699: phenylpropanoid biosynthetic process	3.33E-03
61	GO:0006002: fructose 6-phosphate metabolic process	3.33E-03
62	GO:0015996: chlorophyll catabolic process	3.33E-03
63	GO:0006099: tricarboxylic acid cycle	3.61E-03
64	GO:0006887: exocytosis	4.10E-03
65	GO:0055114: oxidation-reduction process	4.13E-03
66	GO:0000103: sulfate assimilation	4.69E-03
67	GO:0006032: chitin catabolic process	4.69E-03
68	GO:0009688: abscisic acid biosynthetic process	4.69E-03
69	GO:0046856: phosphatidylinositol dephosphorylation	5.19E-03
70	GO:0000272: polysaccharide catabolic process	5.19E-03
71	GO:0051603: proteolysis involved in cellular protein catabolic process	6.20E-03
72	GO:0045454: cell redox homeostasis	6.96E-03
73	GO:0010053: root epidermal cell differentiation	7.32E-03
74	GO:0007031: peroxisome organization	7.32E-03
75	GO:0007030: Golgi organization	7.32E-03
76	GO:0090351: seedling development	7.32E-03
77	GO:0046686: response to cadmium ion	7.52E-03
78	GO:0000162: tryptophan biosynthetic process	7.90E-03
79	GO:0034976: response to endoplasmic reticulum stress	7.90E-03
80	GO:0009751: response to salicylic acid	8.92E-03
81	GO:0008299: isoprenoid biosynthetic process	9.09E-03
82	GO:0015992: proton transport	9.72E-03
83	GO:0019915: lipid storage	9.72E-03
84	GO:0016998: cell wall macromolecule catabolic process	9.72E-03
85	GO:0019748: secondary metabolic process	1.04E-02
86	GO:0009814: defense response, incompatible interaction	1.04E-02
87	GO:0030433: ubiquitin-dependent ERAD pathway	1.04E-02
88	GO:0010584: pollen exine formation	1.17E-02
89	GO:0009561: megagametogenesis	1.17E-02
90	GO:0009306: protein secretion	1.17E-02
91	GO:0006662: glycerol ether metabolic process	1.38E-02
92	GO:0010150: leaf senescence	1.48E-02
93	GO:0009851: auxin biosynthetic process	1.52E-02
94	GO:0006623: protein targeting to vacuole	1.52E-02
95	GO:0006635: fatty acid beta-oxidation	1.60E-02
96	GO:0019760: glucosinolate metabolic process	1.83E-02
97	GO:0009615: response to virus	2.07E-02
98	GO:0001666: response to hypoxia	2.07E-02
99	GO:0010029: regulation of seed germination	2.16E-02
100	GO:0009627: systemic acquired resistance	2.24E-02
101	GO:0006888: ER to Golgi vesicle-mediated transport	2.33E-02
102	GO:0048767: root hair elongation	2.60E-02
103	GO:0006499: N-terminal protein myristoylation	2.69E-02
104	GO:0009407: toxin catabolic process	2.69E-02
105	GO:0010043: response to zinc ion	2.78E-02
106	GO:0048527: lateral root development	2.78E-02
107	GO:0009651: response to salt stress	2.80E-02
108	GO:0045087: innate immune response	2.97E-02
109	GO:0034599: cellular response to oxidative stress	3.06E-02
110	GO:0006839: mitochondrial transport	3.26E-02
111	GO:0006631: fatty acid metabolic process	3.35E-02
112	GO:0042542: response to hydrogen peroxide	3.45E-02
113	GO:0009744: response to sucrose	3.55E-02
114	GO:0051707: response to other organism	3.55E-02
115	GO:0000209: protein polyubiquitination	3.66E-02
116	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.07E-02
117	GO:0009809: lignin biosynthetic process	4.39E-02
118	GO:0006486: protein glycosylation	4.39E-02
119	GO:0009414: response to water deprivation	4.39E-02
120	GO:0006096: glycolytic process	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
2	GO:0016504: peptidase activator activity	0.00E+00
3	GO:0070577: lysine-acetylated histone binding	0.00E+00
4	GO:0005046: KDEL sequence binding	0.00E+00
5	GO:0008320: protein transmembrane transporter activity	1.12E-06
6	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.62E-04
7	GO:0016229: steroid dehydrogenase activity	1.62E-04
8	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.62E-04
9	GO:0070401: NADP+ binding	1.62E-04
10	GO:0030942: endoplasmic reticulum signal peptide binding	1.62E-04
11	GO:0102293: pheophytinase b activity	1.62E-04
12	GO:0043813: phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	1.62E-04
13	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.62E-04
14	GO:0032266: phosphatidylinositol-3-phosphate binding	1.62E-04
15	GO:0004348: glucosylceramidase activity	1.62E-04
16	GO:0047746: chlorophyllase activity	3.69E-04
17	GO:0052739: phosphatidylserine 1-acylhydrolase activity	3.69E-04
18	GO:0010297: heteropolysaccharide binding	3.69E-04
19	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	3.69E-04
20	GO:0050347: trans-octaprenyltranstransferase activity	3.69E-04
21	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	3.69E-04
22	GO:0008805: carbon-monoxide oxygenase activity	3.69E-04
23	GO:0015117: thiosulfate transmembrane transporter activity	3.69E-04
24	GO:0048531: beta-1,3-galactosyltransferase activity	3.69E-04
25	GO:1901677: phosphate transmembrane transporter activity	3.69E-04
26	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	6.04E-04
27	GO:0005310: dicarboxylic acid transmembrane transporter activity	6.04E-04
28	GO:0015141: succinate transmembrane transporter activity	6.04E-04
29	GO:0004165: dodecenoyl-CoA delta-isomerase activity	8.63E-04
30	GO:0017077: oxidative phosphorylation uncoupler activity	8.63E-04
31	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	8.63E-04
32	GO:0004449: isocitrate dehydrogenase (NAD+) activity	8.63E-04
33	GO:0015131: oxaloacetate transmembrane transporter activity	8.63E-04
34	GO:0016656: monodehydroascorbate reductase (NADH) activity	8.63E-04
35	GO:0004659: prenyltransferase activity	1.14E-03
36	GO:0046923: ER retention sequence binding	1.14E-03
37	GO:0070628: proteasome binding	1.14E-03
38	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.14E-03
39	GO:0004031: aldehyde oxidase activity	1.14E-03
40	GO:0050302: indole-3-acetaldehyde oxidase activity	1.14E-03
41	GO:0008374: O-acyltransferase activity	1.45E-03
42	GO:0008474: palmitoyl-(protein) hydrolase activity	1.78E-03
43	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	1.78E-03
44	GO:0004656: procollagen-proline 4-dioxygenase activity	2.14E-03
45	GO:0003872: 6-phosphofructokinase activity	2.52E-03
46	GO:0015140: malate transmembrane transporter activity	2.52E-03
47	GO:0008312: 7S RNA binding	2.91E-03
48	GO:0004033: aldo-keto reductase (NADP) activity	2.91E-03
49	GO:0052747: sinapyl alcohol dehydrogenase activity	2.91E-03
50	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.33E-03
51	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.46E-03
52	GO:0003746: translation elongation factor activity	3.46E-03
53	GO:0000149: SNARE binding	3.77E-03
54	GO:0005484: SNAP receptor activity	4.45E-03
55	GO:0004568: chitinase activity	4.69E-03
56	GO:0050660: flavin adenine dinucleotide binding	5.07E-03
57	GO:0004161: dimethylallyltranstransferase activity	5.19E-03
58	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.69E-03
59	GO:0015116: sulfate transmembrane transporter activity	5.69E-03
60	GO:0008378: galactosyltransferase activity	5.69E-03
61	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	5.69E-03
62	GO:0031072: heat shock protein binding	6.22E-03
63	GO:0031625: ubiquitin protein ligase binding	6.63E-03
64	GO:0004175: endopeptidase activity	6.76E-03
65	GO:0008061: chitin binding	7.32E-03
66	GO:0051536: iron-sulfur cluster binding	8.48E-03
67	GO:0031418: L-ascorbic acid binding	8.48E-03
68	GO:0043130: ubiquitin binding	8.48E-03
69	GO:0015035: protein disulfide oxidoreductase activity	8.78E-03
70	GO:0004298: threonine-type endopeptidase activity	9.72E-03
71	GO:0009055: electron carrier activity	9.93E-03
72	GO:0003756: protein disulfide isomerase activity	1.17E-02
73	GO:0047134: protein-disulfide reductase activity	1.24E-02
74	GO:0004791: thioredoxin-disulfide reductase activity	1.45E-02
75	GO:0004872: receptor activity	1.52E-02
76	GO:0016887: ATPase activity	1.58E-02
77	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.75E-02
78	GO:0051213: dioxygenase activity	2.07E-02
79	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.33E-02
80	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.51E-02
81	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.78E-02
82	GO:0050897: cobalt ion binding	2.78E-02
83	GO:0061630: ubiquitin protein ligase activity	2.99E-02
84	GO:0042393: histone binding	3.26E-02
85	GO:0004364: glutathione transferase activity	3.45E-02
86	GO:0051537: 2 iron, 2 sulfur cluster binding	3.76E-02
87	GO:0005198: structural molecule activity	3.86E-02
88	GO:0003924: GTPase activity	4.18E-02
89	GO:0005506: iron ion binding	4.43E-02
90	GO:0044212: transcription regulatory region DNA binding	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0031901: early endosome membrane	3.56E-06
2	GO:0005801: cis-Golgi network	6.99E-05
3	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	9.33E-05
4	GO:0045252: oxoglutarate dehydrogenase complex	1.62E-04
5	GO:0005783: endoplasmic reticulum	2.55E-04
6	GO:0000814: ESCRT II complex	3.69E-04
7	GO:0030134: ER to Golgi transport vesicle	3.69E-04
8	GO:0005789: endoplasmic reticulum membrane	5.75E-04
9	GO:0030130: clathrin coat of trans-Golgi network vesicle	6.04E-04
10	GO:0030132: clathrin coat of coated pit	6.04E-04
11	GO:0005794: Golgi apparatus	7.23E-04
12	GO:0005839: proteasome core complex	7.44E-04
13	GO:0005945: 6-phosphofructokinase complex	1.45E-03
14	GO:0032580: Golgi cisterna membrane	1.77E-03
15	GO:0030173: integral component of Golgi membrane	2.14E-03
16	GO:0031982: vesicle	2.91E-03
17	GO:0005779: integral component of peroxisomal membrane	3.33E-03
18	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.33E-03
19	GO:0005811: lipid particle	3.33E-03
20	GO:0031090: organelle membrane	3.77E-03
21	GO:0031201: SNARE complex	4.10E-03
22	GO:0008540: proteasome regulatory particle, base subcomplex	4.22E-03
23	GO:0005886: plasma membrane	5.11E-03
24	GO:0016021: integral component of membrane	5.81E-03
25	GO:0000502: proteasome complex	5.99E-03
26	GO:0005769: early endosome	7.90E-03
27	GO:0005737: cytoplasm	1.04E-02
28	GO:0005623: cell	1.10E-02
29	GO:0005768: endosome	1.10E-02
30	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.17E-02
31	GO:0005770: late endosome	1.38E-02
32	GO:0019898: extrinsic component of membrane	1.52E-02
33	GO:0009504: cell plate	1.52E-02
34	GO:0016592: mediator complex	1.67E-02
35	GO:0005778: peroxisomal membrane	1.91E-02
36	GO:0005788: endoplasmic reticulum lumen	2.16E-02