co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G47900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
2	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
3	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
4	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
5	GO:0001778: plasma membrane repair	0.00E+00
6	GO:0070979: protein K11-linked ubiquitination	0.00E+00
7	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
8	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
9	GO:0006907: pinocytosis	0.00E+00
10	GO:0017038: protein import	0.00E+00
11	GO:0007638: mechanosensory behavior	0.00E+00
12	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
13	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
14	GO:0006573: valine metabolic process	0.00E+00
15	GO:0000372: Group I intron splicing	0.00E+00
16	GO:0045184: establishment of protein localization	0.00E+00
17	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
18	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
19	GO:0070125: mitochondrial translational elongation	0.00E+00
20	GO:0019323: pentose catabolic process	0.00E+00
21	GO:0031222: arabinan catabolic process	0.00E+00
22	GO:0009658: chloroplast organization	3.89E-06
23	GO:0046620: regulation of organ growth	5.53E-06
24	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.22E-05
25	GO:1900865: chloroplast RNA modification	2.03E-05
26	GO:0040008: regulation of growth	1.30E-04
27	GO:0009451: RNA modification	1.59E-04
28	GO:0016556: mRNA modification	2.68E-04
29	GO:0015995: chlorophyll biosynthetic process	3.05E-04
30	GO:0009733: response to auxin	3.44E-04
31	GO:0009416: response to light stimulus	4.21E-04
32	GO:0009734: auxin-activated signaling pathway	6.12E-04
33	GO:0016123: xanthophyll biosynthetic process	6.49E-04
34	GO:0010020: chloroplast fission	8.54E-04
35	GO:0016554: cytidine to uridine editing	8.95E-04
36	GO:0042793: transcription from plastid promoter	8.95E-04
37	GO:0009926: auxin polar transport	9.13E-04
38	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.04E-03
39	GO:0010480: microsporocyte differentiation	1.04E-03
40	GO:0010080: regulation of floral meristem growth	1.04E-03
41	GO:0015904: tetracycline transport	1.04E-03
42	GO:0042759: long-chain fatty acid biosynthetic process	1.04E-03
43	GO:2000905: negative regulation of starch metabolic process	1.04E-03
44	GO:0006551: leucine metabolic process	1.04E-03
45	GO:0006438: valyl-tRNA aminoacylation	1.04E-03
46	GO:0043087: regulation of GTPase activity	1.04E-03
47	GO:2000021: regulation of ion homeostasis	1.04E-03
48	GO:0048363: mucilage pectin metabolic process	1.04E-03
49	GO:0009090: homoserine biosynthetic process	1.04E-03
50	GO:0035987: endodermal cell differentiation	1.04E-03
51	GO:0090558: plant epidermis development	1.04E-03
52	GO:0070509: calcium ion import	1.04E-03
53	GO:0006419: alanyl-tRNA aminoacylation	1.04E-03
54	GO:0043489: RNA stabilization	1.04E-03
55	GO:0044262: cellular carbohydrate metabolic process	1.04E-03
56	GO:0051247: positive regulation of protein metabolic process	1.04E-03
57	GO:1902458: positive regulation of stomatal opening	1.04E-03
58	GO:0042659: regulation of cell fate specification	1.04E-03
59	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	1.04E-03
60	GO:0043266: regulation of potassium ion transport	1.04E-03
61	GO:0010442: guard cell morphogenesis	1.04E-03
62	GO:0000025: maltose catabolic process	1.04E-03
63	GO:0010063: positive regulation of trichoblast fate specification	1.04E-03
64	GO:0009099: valine biosynthetic process	1.18E-03
65	GO:0030488: tRNA methylation	1.18E-03
66	GO:0009082: branched-chain amino acid biosynthetic process	1.18E-03
67	GO:0010027: thylakoid membrane organization	1.27E-03
68	GO:0048437: floral organ development	1.51E-03
69	GO:2000070: regulation of response to water deprivation	1.89E-03
70	GO:0009793: embryo development ending in seed dormancy	2.01E-03
71	GO:0060359: response to ammonium ion	2.27E-03
72	GO:0071668: plant-type cell wall assembly	2.27E-03
73	GO:0048255: mRNA stabilization	2.27E-03
74	GO:0001736: establishment of planar polarity	2.27E-03
75	GO:2000123: positive regulation of stomatal complex development	2.27E-03
76	GO:0010024: phytochromobilin biosynthetic process	2.27E-03
77	GO:0080009: mRNA methylation	2.27E-03
78	GO:0009786: regulation of asymmetric cell division	2.27E-03
79	GO:0046740: transport of virus in host, cell to cell	2.27E-03
80	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.27E-03
81	GO:0001682: tRNA 5'-leader removal	2.27E-03
82	GO:1900871: chloroplast mRNA modification	2.27E-03
83	GO:0052541: plant-type cell wall cellulose metabolic process	2.27E-03
84	GO:0006432: phenylalanyl-tRNA aminoacylation	2.27E-03
85	GO:1903426: regulation of reactive oxygen species biosynthetic process	2.27E-03
86	GO:0018026: peptidyl-lysine monomethylation	2.27E-03
87	GO:0006568: tryptophan metabolic process	2.27E-03
88	GO:0071482: cellular response to light stimulus	2.31E-03
89	GO:0009097: isoleucine biosynthetic process	2.31E-03
90	GO:0016117: carotenoid biosynthetic process	2.61E-03
91	GO:0000373: Group II intron splicing	2.78E-03
92	GO:0009958: positive gravitropism	3.18E-03
93	GO:0010182: sugar mediated signaling pathway	3.18E-03
94	GO:0010305: leaf vascular tissue pattern formation	3.18E-03
95	GO:0009742: brassinosteroid mediated signaling pathway	3.24E-03
96	GO:0031425: chloroplast RNA processing	3.30E-03
97	GO:0009638: phototropism	3.30E-03
98	GO:0006779: porphyrin-containing compound biosynthetic process	3.30E-03
99	GO:0009098: leucine biosynthetic process	3.30E-03
100	GO:0006696: ergosterol biosynthetic process	3.77E-03
101	GO:0090153: regulation of sphingolipid biosynthetic process	3.77E-03
102	GO:0048586: regulation of long-day photoperiodism, flowering	3.77E-03
103	GO:0045910: negative regulation of DNA recombination	3.77E-03
104	GO:0006788: heme oxidation	3.77E-03
105	GO:0043157: response to cation stress	3.77E-03
106	GO:0010022: meristem determinacy	3.77E-03
107	GO:0031145: anaphase-promoting complex-dependent catabolic process	3.77E-03
108	GO:0033591: response to L-ascorbic acid	3.77E-03
109	GO:0090708: specification of plant organ axis polarity	3.77E-03
110	GO:0080055: low-affinity nitrate transport	3.77E-03
111	GO:0006782: protoporphyrinogen IX biosynthetic process	3.87E-03
112	GO:0048829: root cap development	3.87E-03
113	GO:0009641: shade avoidance	3.87E-03
114	GO:0032502: developmental process	4.56E-03
115	GO:0005983: starch catabolic process	5.15E-03
116	GO:0010582: floral meristem determinacy	5.15E-03
117	GO:0019048: modulation by virus of host morphology or physiology	5.52E-03
118	GO:0010071: root meristem specification	5.52E-03
119	GO:0051513: regulation of monopolar cell growth	5.52E-03
120	GO:0043572: plastid fission	5.52E-03
121	GO:0009052: pentose-phosphate shunt, non-oxidative branch	5.52E-03
122	GO:0007231: osmosensory signaling pathway	5.52E-03
123	GO:0010306: rhamnogalacturonan II biosynthetic process	5.52E-03
124	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	5.52E-03
125	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	5.52E-03
126	GO:2001141: regulation of RNA biosynthetic process	5.52E-03
127	GO:0009102: biotin biosynthetic process	5.52E-03
128	GO:0030071: regulation of mitotic metaphase/anaphase transition	5.52E-03
129	GO:0006612: protein targeting to membrane	5.52E-03
130	GO:0051639: actin filament network formation	5.52E-03
131	GO:0031048: chromatin silencing by small RNA	5.52E-03
132	GO:0032456: endocytic recycling	5.52E-03
133	GO:0009067: aspartate family amino acid biosynthetic process	5.52E-03
134	GO:0046739: transport of virus in multicellular host	5.52E-03
135	GO:1990019: protein storage vacuole organization	5.52E-03
136	GO:0034059: response to anoxia	5.52E-03
137	GO:0010239: chloroplast mRNA processing	5.52E-03
138	GO:0010371: regulation of gibberellin biosynthetic process	5.52E-03
139	GO:0009725: response to hormone	5.87E-03
140	GO:0010207: photosystem II assembly	6.64E-03
141	GO:0006397: mRNA processing	6.73E-03
142	GO:0070588: calcium ion transmembrane transport	7.47E-03
143	GO:0030104: water homeostasis	7.48E-03
144	GO:0033500: carbohydrate homeostasis	7.48E-03
145	GO:0009755: hormone-mediated signaling pathway	7.48E-03
146	GO:2000038: regulation of stomatal complex development	7.48E-03
147	GO:0051764: actin crosslink formation	7.48E-03
148	GO:0042274: ribosomal small subunit biogenesis	7.48E-03
149	GO:0051567: histone H3-K9 methylation	7.48E-03
150	GO:0008295: spermidine biosynthetic process	7.48E-03
151	GO:0009765: photosynthesis, light harvesting	7.48E-03
152	GO:2000306: positive regulation of photomorphogenesis	7.48E-03
153	GO:0010109: regulation of photosynthesis	7.48E-03
154	GO:0051017: actin filament bundle assembly	9.28E-03
155	GO:0045038: protein import into chloroplast thylakoid membrane	9.65E-03
156	GO:0000304: response to singlet oxygen	9.65E-03
157	GO:0080110: sporopollenin biosynthetic process	9.65E-03
158	GO:0048497: maintenance of floral organ identity	9.65E-03
159	GO:0016120: carotene biosynthetic process	9.65E-03
160	GO:0010438: cellular response to sulfur starvation	9.65E-03
161	GO:0010158: abaxial cell fate specification	9.65E-03
162	GO:0032876: negative regulation of DNA endoreduplication	9.65E-03
163	GO:0010375: stomatal complex patterning	9.65E-03
164	GO:0007166: cell surface receptor signaling pathway	9.75E-03
165	GO:0016458: gene silencing	1.20E-02
166	GO:0009913: epidermal cell differentiation	1.20E-02
167	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.20E-02
168	GO:1902456: regulation of stomatal opening	1.20E-02
169	GO:0009959: negative gravitropism	1.20E-02
170	GO:0010405: arabinogalactan protein metabolic process	1.20E-02
171	GO:0032973: amino acid export	1.20E-02
172	GO:0033365: protein localization to organelle	1.20E-02
173	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.20E-02
174	GO:0000741: karyogamy	1.20E-02
175	GO:0006468: protein phosphorylation	1.27E-02
176	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.36E-02
177	GO:0009648: photoperiodism	1.46E-02
178	GO:0042372: phylloquinone biosynthetic process	1.46E-02
179	GO:2000067: regulation of root morphogenesis	1.46E-02
180	GO:0009088: threonine biosynthetic process	1.46E-02
181	GO:0009612: response to mechanical stimulus	1.46E-02
182	GO:0017148: negative regulation of translation	1.46E-02
183	GO:2000033: regulation of seed dormancy process	1.46E-02
184	GO:0080086: stamen filament development	1.46E-02
185	GO:0031930: mitochondria-nucleus signaling pathway	1.46E-02
186	GO:0016042: lipid catabolic process	1.63E-02
187	GO:0010050: vegetative phase change	1.73E-02
188	GO:0015693: magnesium ion transport	1.73E-02
189	GO:0006955: immune response	1.73E-02
190	GO:0010098: suspensor development	1.73E-02
191	GO:0048528: post-embryonic root development	1.73E-02
192	GO:0043090: amino acid import	1.73E-02
193	GO:0010444: guard mother cell differentiation	1.73E-02
194	GO:0006400: tRNA modification	1.73E-02
195	GO:0008033: tRNA processing	1.74E-02
196	GO:0010087: phloem or xylem histogenesis	1.74E-02
197	GO:0048868: pollen tube development	1.88E-02
198	GO:0009790: embryo development	2.00E-02
199	GO:0010439: regulation of glucosinolate biosynthetic process	2.02E-02
200	GO:0001522: pseudouridine synthesis	2.02E-02
201	GO:0009819: drought recovery	2.02E-02
202	GO:0007018: microtubule-based movement	2.02E-02
203	GO:0055075: potassium ion homeostasis	2.02E-02
204	GO:0000105: histidine biosynthetic process	2.02E-02
205	GO:0007155: cell adhesion	2.02E-02
206	GO:0048564: photosystem I assembly	2.02E-02
207	GO:0009850: auxin metabolic process	2.02E-02
208	GO:0009690: cytokinin metabolic process	2.02E-02
209	GO:0006605: protein targeting	2.02E-02
210	GO:0032875: regulation of DNA endoreduplication	2.02E-02
211	GO:0048366: leaf development	2.18E-02
212	GO:0032544: plastid translation	2.33E-02
213	GO:0007186: G-protein coupled receptor signaling pathway	2.33E-02
214	GO:0010497: plasmodesmata-mediated intercellular transport	2.33E-02
215	GO:0009657: plastid organization	2.33E-02
216	GO:0015996: chlorophyll catabolic process	2.33E-02
217	GO:0010583: response to cyclopentenone	2.48E-02
218	GO:0016032: viral process	2.48E-02
219	GO:0006098: pentose-phosphate shunt	2.65E-02
220	GO:0080144: amino acid homeostasis	2.65E-02
221	GO:0000902: cell morphogenesis	2.65E-02
222	GO:0048507: meristem development	2.65E-02
223	GO:0046916: cellular transition metal ion homeostasis	2.65E-02
224	GO:0009828: plant-type cell wall loosening	2.82E-02
225	GO:0009086: methionine biosynthetic process	2.98E-02
226	GO:2000280: regulation of root development	2.98E-02
227	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.98E-02
228	GO:0051607: defense response to virus	3.18E-02
229	GO:0006949: syncytium formation	3.33E-02
230	GO:0009299: mRNA transcription	3.33E-02
231	GO:0030422: production of siRNA involved in RNA interference	3.33E-02
232	GO:0006535: cysteine biosynthetic process from serine	3.33E-02
233	GO:0006298: mismatch repair	3.33E-02
234	GO:0010162: seed dormancy process	3.33E-02
235	GO:0009773: photosynthetic electron transport in photosystem I	3.70E-02
236	GO:0048229: gametophyte development	3.70E-02
237	GO:0009682: induced systemic resistance	3.70E-02
238	GO:0009089: lysine biosynthetic process via diaminopimelate	3.70E-02
239	GO:0048765: root hair cell differentiation	3.70E-02
240	GO:0009073: aromatic amino acid family biosynthetic process	3.70E-02
241	GO:0043085: positive regulation of catalytic activity	3.70E-02
242	GO:0006415: translational termination	3.70E-02
243	GO:1903507: negative regulation of nucleic acid-templated transcription	3.70E-02
244	GO:0006352: DNA-templated transcription, initiation	3.70E-02
245	GO:0006816: calcium ion transport	3.70E-02
246	GO:0045037: protein import into chloroplast stroma	4.07E-02
247	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.07E-02
248	GO:0006396: RNA processing	4.20E-02
249	GO:0010588: cotyledon vascular tissue pattern formation	4.46E-02
250	GO:0006006: glucose metabolic process	4.46E-02
251	GO:0006094: gluconeogenesis	4.46E-02
252	GO:0030048: actin filament-based movement	4.46E-02
253	GO:0050826: response to freezing	4.46E-02
254	GO:0009785: blue light signaling pathway	4.46E-02
255	GO:0009718: anthocyanin-containing compound biosynthetic process	4.46E-02
256	GO:0010075: regulation of meristem growth	4.46E-02
257	GO:0010628: positive regulation of gene expression	4.46E-02
258	GO:0009691: cytokinin biosynthetic process	4.46E-02
259	GO:0000160: phosphorelay signal transduction system	4.60E-02
260	GO:0010311: lateral root formation	4.60E-02
261	GO:0009934: regulation of meristem structural organization	4.86E-02
262	GO:0005975: carbohydrate metabolic process	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0047661: amino-acid racemase activity	0.00E+00
2	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
3	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
4	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
5	GO:0071633: dihydroceramidase activity	0.00E+00
6	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
7	GO:0004076: biotin synthase activity	0.00E+00
8	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
9	GO:0015267: channel activity	0.00E+00
10	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
11	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
12	GO:0046905: phytoene synthase activity	0.00E+00
13	GO:0003723: RNA binding	3.29E-06
14	GO:0004519: endonuclease activity	1.66E-05
15	GO:0003913: DNA photolyase activity	1.34E-04
16	GO:0001872: (1->3)-beta-D-glucan binding	2.68E-04
17	GO:0008266: poly(U) RNA binding	8.54E-04
18	GO:0042834: peptidoglycan binding	1.04E-03
19	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.04E-03
20	GO:0004832: valine-tRNA ligase activity	1.04E-03
21	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.04E-03
22	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.04E-03
23	GO:0050308: sugar-phosphatase activity	1.04E-03
24	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	1.04E-03
25	GO:0004813: alanine-tRNA ligase activity	1.04E-03
26	GO:0050139: nicotinate-N-glucosyltransferase activity	1.04E-03
27	GO:0004134: 4-alpha-glucanotransferase activity	1.04E-03
28	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	1.04E-03
29	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.04E-03
30	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.04E-03
31	GO:0005227: calcium activated cation channel activity	1.04E-03
32	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.04E-03
33	GO:0019203: carbohydrate phosphatase activity	1.04E-03
34	GO:0003984: acetolactate synthase activity	1.04E-03
35	GO:0052381: tRNA dimethylallyltransferase activity	1.04E-03
36	GO:0051996: squalene synthase activity	1.04E-03
37	GO:0008158: hedgehog receptor activity	1.04E-03
38	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	1.04E-03
39	GO:0016597: amino acid binding	1.16E-03
40	GO:0004176: ATP-dependent peptidase activity	1.67E-03
41	GO:0004222: metalloendopeptidase activity	2.24E-03
42	GO:0008805: carbon-monoxide oxygenase activity	2.27E-03
43	GO:0050017: L-3-cyanoalanine synthase activity	2.27E-03
44	GO:0017118: lipoyltransferase activity	2.27E-03
45	GO:0008493: tetracycline transporter activity	2.27E-03
46	GO:0004766: spermidine synthase activity	2.27E-03
47	GO:0004826: phenylalanine-tRNA ligase activity	2.27E-03
48	GO:0004412: homoserine dehydrogenase activity	2.27E-03
49	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	2.27E-03
50	GO:0003852: 2-isopropylmalate synthase activity	2.27E-03
51	GO:1901981: phosphatidylinositol phosphate binding	2.27E-03
52	GO:0004750: ribulose-phosphate 3-epimerase activity	2.27E-03
53	GO:0080041: ADP-ribose pyrophosphohydrolase activity	2.27E-03
54	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	2.27E-03
55	GO:0043425: bHLH transcription factor binding	2.27E-03
56	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	2.27E-03
57	GO:0080054: low-affinity nitrate transmembrane transporter activity	3.77E-03
58	GO:0016805: dipeptidase activity	3.77E-03
59	GO:0015462: ATPase-coupled protein transmembrane transporter activity	3.77E-03
60	GO:0004148: dihydrolipoyl dehydrogenase activity	3.77E-03
61	GO:0004180: carboxypeptidase activity	3.77E-03
62	GO:0070330: aromatase activity	3.77E-03
63	GO:0000049: tRNA binding	5.15E-03
64	GO:0052655: L-valine transaminase activity	5.52E-03
65	GO:0043023: ribosomal large subunit binding	5.52E-03
66	GO:0052654: L-leucine transaminase activity	5.52E-03
67	GO:0016149: translation release factor activity, codon specific	5.52E-03
68	GO:0004300: enoyl-CoA hydratase activity	5.52E-03
69	GO:0004072: aspartate kinase activity	5.52E-03
70	GO:0035197: siRNA binding	5.52E-03
71	GO:0016851: magnesium chelatase activity	5.52E-03
72	GO:0052656: L-isoleucine transaminase activity	5.52E-03
73	GO:0008237: metallopeptidase activity	5.80E-03
74	GO:0009982: pseudouridine synthase activity	5.87E-03
75	GO:0031072: heat shock protein binding	5.87E-03
76	GO:0005262: calcium channel activity	5.87E-03
77	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.64E-03
78	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.81E-03
79	GO:0004392: heme oxygenase (decyclizing) activity	7.48E-03
80	GO:0010328: auxin influx transmembrane transporter activity	7.48E-03
81	GO:0010011: auxin binding	7.48E-03
82	GO:0004084: branched-chain-amino-acid transaminase activity	7.48E-03
83	GO:0046556: alpha-L-arabinofuranosidase activity	7.48E-03
84	GO:0019199: transmembrane receptor protein kinase activity	7.48E-03
85	GO:0016279: protein-lysine N-methyltransferase activity	7.48E-03
86	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	7.48E-03
87	GO:0001053: plastid sigma factor activity	7.48E-03
88	GO:0016987: sigma factor activity	7.48E-03
89	GO:0005528: FK506 binding	9.28E-03
90	GO:0008725: DNA-3-methyladenine glycosylase activity	9.65E-03
91	GO:0018685: alkane 1-monooxygenase activity	9.65E-03
92	GO:0052689: carboxylic ester hydrolase activity	9.82E-03
93	GO:0005096: GTPase activator activity	1.01E-02
94	GO:0030983: mismatched DNA binding	1.20E-02
95	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.20E-02
96	GO:0016208: AMP binding	1.20E-02
97	GO:0004332: fructose-bisphosphate aldolase activity	1.20E-02
98	GO:0004526: ribonuclease P activity	1.20E-02
99	GO:0004709: MAP kinase kinase kinase activity	1.20E-02
100	GO:2001070: starch binding	1.20E-02
101	GO:0004871: signal transducer activity	1.26E-02
102	GO:0030570: pectate lyase activity	1.36E-02
103	GO:0005524: ATP binding	1.44E-02
104	GO:0004656: procollagen-proline 4-dioxygenase activity	1.46E-02
105	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.46E-02
106	GO:0016832: aldehyde-lyase activity	1.46E-02
107	GO:0004124: cysteine synthase activity	1.46E-02
108	GO:0051753: mannan synthase activity	1.46E-02
109	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.57E-02
110	GO:0016887: ATPase activity	1.57E-02
111	GO:0009881: photoreceptor activity	1.73E-02
112	GO:0016829: lyase activity	1.78E-02
113	GO:0035091: phosphatidylinositol binding	1.97E-02
114	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.17E-02
115	GO:0046914: transition metal ion binding	2.33E-02
116	GO:0008173: RNA methyltransferase activity	2.33E-02
117	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.65E-02
118	GO:0004674: protein serine/threonine kinase activity	2.65E-02
119	GO:0051015: actin filament binding	2.65E-02
120	GO:0003747: translation release factor activity	2.65E-02
121	GO:0000156: phosphorelay response regulator activity	2.65E-02
122	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	2.65E-02
123	GO:0015171: amino acid transmembrane transporter activity	2.97E-02
124	GO:0003777: microtubule motor activity	2.97E-02
125	GO:0008047: enzyme activator activity	3.33E-02
126	GO:0004650: polygalacturonase activity	3.62E-02
127	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.70E-02
128	GO:0030247: polysaccharide binding	3.96E-02
129	GO:0004521: endoribonuclease activity	4.07E-02
130	GO:0015266: protein channel activity	4.46E-02
131	GO:0015095: magnesium ion transmembrane transporter activity	4.46E-02
132	GO:0015238: drug transmembrane transporter activity	4.60E-02
133	GO:0003774: motor activity	4.86E-02
134	GO:0016788: hydrolase activity, acting on ester bonds	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005948: acetolactate synthase complex	0.00E+00
2	GO:0000408: EKC/KEOPS complex	0.00E+00
3	GO:0009537: proplastid	0.00E+00
4	GO:0009507: chloroplast	1.34E-22
5	GO:0009570: chloroplast stroma	2.17E-10
6	GO:0009941: chloroplast envelope	1.87E-08
7	GO:0009508: plastid chromosome	3.24E-06
8	GO:0009534: chloroplast thylakoid	2.10E-05
9	GO:0009501: amyloplast	1.52E-04
10	GO:0009295: nucleoid	1.74E-04
11	GO:0030529: intracellular ribonucleoprotein complex	2.21E-04
12	GO:0046658: anchored component of plasma membrane	3.24E-04
13	GO:0005886: plasma membrane	4.03E-04
14	GO:0009535: chloroplast thylakoid membrane	8.20E-04
15	GO:0031969: chloroplast membrane	8.24E-04
16	GO:0032541: cortical endoplasmic reticulum	1.04E-03
17	GO:0009986: cell surface	1.51E-03
18	GO:0031225: anchored component of membrane	1.61E-03
19	GO:0009532: plastid stroma	1.67E-03
20	GO:0009513: etioplast	2.27E-03
21	GO:0000427: plastid-encoded plastid RNA polymerase complex	2.27E-03
22	GO:0031357: integral component of chloroplast inner membrane	2.27E-03
23	GO:0010007: magnesium chelatase complex	3.77E-03
24	GO:0009509: chromoplast	3.77E-03
25	GO:0030139: endocytic vesicle	3.77E-03
26	GO:0009528: plastid inner membrane	3.77E-03
27	GO:0009543: chloroplast thylakoid lumen	4.36E-03
28	GO:0032585: multivesicular body membrane	5.52E-03
29	GO:0032432: actin filament bundle	5.52E-03
30	GO:0005719: nuclear euchromatin	5.52E-03
31	GO:0010319: stromule	5.80E-03
32	GO:0005578: proteinaceous extracellular matrix	5.87E-03
33	GO:0009527: plastid outer membrane	7.48E-03
34	GO:0030663: COPI-coated vesicle membrane	7.48E-03
35	GO:0009898: cytoplasmic side of plasma membrane	7.48E-03
36	GO:0043231: intracellular membrane-bounded organelle	7.59E-03
37	GO:0009654: photosystem II oxygen evolving complex	1.03E-02
38	GO:0009579: thylakoid	1.25E-02
39	GO:0015629: actin cytoskeleton	1.36E-02
40	GO:0005871: kinesin complex	1.60E-02
41	GO:0042807: central vacuole	1.73E-02
42	GO:0009533: chloroplast stromal thylakoid	1.73E-02
43	GO:0048226: Casparian strip	2.02E-02
44	GO:0019898: extrinsic component of membrane	2.17E-02
45	GO:0005874: microtubule	2.25E-02
46	GO:0000326: protein storage vacuole	2.33E-02
47	GO:0005680: anaphase-promoting complex	2.65E-02
48	GO:0015030: Cajal body	2.98E-02
49	GO:0016604: nuclear body	2.98E-02
50	GO:0030125: clathrin vesicle coat	3.33E-02
51	GO:0000418: DNA-directed RNA polymerase IV complex	3.33E-02
52	GO:0016459: myosin complex	3.33E-02
53	GO:0005884: actin filament	3.70E-02
54	GO:0009706: chloroplast inner membrane	4.05E-02
55	GO:0000311: plastid large ribosomal subunit	4.07E-02
56	GO:0009707: chloroplast outer membrane	4.39E-02
57	GO:0009574: preprophase band	4.46E-02
58	GO:0030095: chloroplast photosystem II	4.86E-02