co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G45230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046460: neutral lipid biosynthetic process	0.00E+00
2	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
3	GO:0043972: histone H3-K23 acetylation	0.00E+00
4	GO:0043457: regulation of cellular respiration	0.00E+00
5	GO:0044154: histone H3-K14 acetylation	0.00E+00
6	GO:1901698: response to nitrogen compound	0.00E+00
7	GO:1901135: carbohydrate derivative metabolic process	1.77E-04
8	GO:0048657: anther wall tapetum cell differentiation	1.77E-04
9	GO:0042547: cell wall modification involved in multidimensional cell growth	1.77E-04
10	GO:0006436: tryptophanyl-tRNA aminoacylation	1.77E-04
11	GO:0000066: mitochondrial ornithine transport	1.77E-04
12	GO:0051171: regulation of nitrogen compound metabolic process	1.77E-04
13	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.77E-04
14	GO:1902265: abscisic acid homeostasis	1.77E-04
15	GO:0043971: histone H3-K18 acetylation	1.77E-04
16	GO:0006435: threonyl-tRNA aminoacylation	4.01E-04
17	GO:0080005: photosystem stoichiometry adjustment	4.01E-04
18	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	4.01E-04
19	GO:0010275: NAD(P)H dehydrogenase complex assembly	4.01E-04
20	GO:0006013: mannose metabolic process	6.55E-04
21	GO:0071705: nitrogen compound transport	6.55E-04
22	GO:0001578: microtubule bundle formation	6.55E-04
23	GO:0045493: xylan catabolic process	6.55E-04
24	GO:0031022: nuclear migration along microfilament	6.55E-04
25	GO:0009800: cinnamic acid biosynthetic process	9.34E-04
26	GO:0010306: rhamnogalacturonan II biosynthetic process	9.34E-04
27	GO:0010255: glucose mediated signaling pathway	9.34E-04
28	GO:0006168: adenine salvage	9.34E-04
29	GO:0006166: purine ribonucleoside salvage	9.34E-04
30	GO:0006508: proteolysis	1.13E-03
31	GO:0007020: microtubule nucleation	1.24E-03
32	GO:0015846: polyamine transport	1.24E-03
33	GO:0009902: chloroplast relocation	1.24E-03
34	GO:0051322: anaphase	1.24E-03
35	GO:0071249: cellular response to nitrate	1.24E-03
36	GO:0048868: pollen tube development	1.35E-03
37	GO:0046785: microtubule polymerization	1.57E-03
38	GO:0031365: N-terminal protein amino acid modification	1.57E-03
39	GO:0044209: AMP salvage	1.57E-03
40	GO:0006465: signal peptide processing	1.57E-03
41	GO:0042549: photosystem II stabilization	1.94E-03
42	GO:0006559: L-phenylalanine catabolic process	1.94E-03
43	GO:0034389: lipid particle organization	2.32E-03
44	GO:0009903: chloroplast avoidance movement	2.32E-03
45	GO:0048528: post-embryonic root development	2.74E-03
46	GO:0006353: DNA-templated transcription, termination	3.17E-03
47	GO:0009704: de-etiolation	3.17E-03
48	GO:0032508: DNA duplex unwinding	3.17E-03
49	GO:0007155: cell adhesion	3.17E-03
50	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.17E-03
51	GO:0007389: pattern specification process	3.63E-03
52	GO:0044030: regulation of DNA methylation	3.63E-03
53	GO:0022900: electron transport chain	3.63E-03
54	GO:0009827: plant-type cell wall modification	3.63E-03
55	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.10E-03
56	GO:0019432: triglyceride biosynthetic process	4.10E-03
57	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.60E-03
58	GO:0010380: regulation of chlorophyll biosynthetic process	4.60E-03
59	GO:0051707: response to other organism	5.03E-03
60	GO:0006259: DNA metabolic process	5.11E-03
61	GO:0010192: mucilage biosynthetic process	5.11E-03
62	GO:0006415: translational termination	5.65E-03
63	GO:0006265: DNA topological change	5.65E-03
64	GO:0009750: response to fructose	5.65E-03
65	GO:0015706: nitrate transport	6.20E-03
66	GO:0030048: actin filament-based movement	6.78E-03
67	GO:0009767: photosynthetic electron transport chain	6.78E-03
68	GO:0009825: multidimensional cell growth	7.98E-03
69	GO:0080188: RNA-directed DNA methylation	7.98E-03
70	GO:0010167: response to nitrate	7.98E-03
71	GO:0006863: purine nucleobase transport	8.61E-03
72	GO:0006071: glycerol metabolic process	8.61E-03
73	GO:0009740: gibberellic acid mediated signaling pathway	9.09E-03
74	GO:0010187: negative regulation of seed germination	9.26E-03
75	GO:0006289: nucleotide-excision repair	9.26E-03
76	GO:0043622: cortical microtubule organization	9.92E-03
77	GO:0010073: meristem maintenance	9.92E-03
78	GO:0006825: copper ion transport	9.92E-03
79	GO:0006418: tRNA aminoacylation for protein translation	9.92E-03
80	GO:0009269: response to desiccation	1.06E-02
81	GO:0009814: defense response, incompatible interaction	1.13E-02
82	GO:0080092: regulation of pollen tube growth	1.13E-02
83	GO:0019748: secondary metabolic process	1.13E-02
84	GO:0010584: pollen exine formation	1.27E-02
85	GO:0048443: stamen development	1.27E-02
86	GO:0010268: brassinosteroid homeostasis	1.50E-02
87	GO:0045489: pectin biosynthetic process	1.50E-02
88	GO:0007059: chromosome segregation	1.58E-02
89	GO:0009749: response to glucose	1.66E-02
90	GO:0009451: RNA modification	1.71E-02
91	GO:0016132: brassinosteroid biosynthetic process	1.75E-02
92	GO:0010228: vegetative to reproductive phase transition of meristem	1.75E-02
93	GO:0007264: small GTPase mediated signal transduction	1.83E-02
94	GO:0009739: response to gibberellin	1.88E-02
95	GO:0016125: sterol metabolic process	2.00E-02
96	GO:0010468: regulation of gene expression	2.00E-02
97	GO:0010252: auxin homeostasis	2.00E-02
98	GO:0000910: cytokinesis	2.18E-02
99	GO:0009911: positive regulation of flower development	2.27E-02
100	GO:0016126: sterol biosynthetic process	2.27E-02
101	GO:0010029: regulation of seed germination	2.36E-02
102	GO:0010411: xyloglucan metabolic process	2.55E-02
103	GO:0048481: plant ovule development	2.74E-02
104	GO:0030244: cellulose biosynthetic process	2.74E-02
105	GO:0009860: pollen tube growth	2.80E-02
106	GO:0009834: plant-type secondary cell wall biogenesis	2.94E-02
107	GO:0009631: cold acclimation	3.04E-02
108	GO:0009910: negative regulation of flower development	3.04E-02
109	GO:0080167: response to karrikin	3.22E-02
110	GO:0009637: response to blue light	3.24E-02
111	GO:0009853: photorespiration	3.24E-02
112	GO:0046777: protein autophosphorylation	3.44E-02
113	GO:0006839: mitochondrial transport	3.56E-02
114	GO:0008283: cell proliferation	3.88E-02
115	GO:0009926: auxin polar transport	3.88E-02
116	GO:0009744: response to sucrose	3.88E-02
117	GO:0010224: response to UV-B	4.92E-02
118	GO:0051603: proteolysis involved in cellular protein catabolic process	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
2	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
3	GO:0019808: polyamine binding	0.00E+00
4	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
5	GO:0016972: thiol oxidase activity	1.77E-04
6	GO:0004830: tryptophan-tRNA ligase activity	1.77E-04
7	GO:0097367: carbohydrate derivative binding	1.77E-04
8	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.77E-04
9	GO:0005290: L-histidine transmembrane transporter activity	1.77E-04
10	GO:0004008: copper-exporting ATPase activity	1.77E-04
11	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	4.01E-04
12	GO:0004829: threonine-tRNA ligase activity	4.01E-04
13	GO:0016971: flavin-linked sulfhydryl oxidase activity	4.01E-04
14	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	4.01E-04
15	GO:0000064: L-ornithine transmembrane transporter activity	4.01E-04
16	GO:0032549: ribonucleoside binding	6.55E-04
17	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	6.55E-04
18	GO:0016805: dipeptidase activity	6.55E-04
19	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	6.55E-04
20	GO:0045548: phenylalanine ammonia-lyase activity	6.55E-04
21	GO:0004848: ureidoglycolate hydrolase activity	6.55E-04
22	GO:0004176: ATP-dependent peptidase activity	8.37E-04
23	GO:0003999: adenine phosphoribosyltransferase activity	9.34E-04
24	GO:0015189: L-lysine transmembrane transporter activity	9.34E-04
25	GO:0000254: C-4 methylsterol oxidase activity	9.34E-04
26	GO:0015181: arginine transmembrane transporter activity	9.34E-04
27	GO:0070628: proteasome binding	1.24E-03
28	GO:0009044: xylan 1,4-beta-xylosidase activity	1.24E-03
29	GO:0046556: alpha-L-arabinofuranosidase activity	1.24E-03
30	GO:0010385: double-stranded methylated DNA binding	1.24E-03
31	GO:0031593: polyubiquitin binding	1.94E-03
32	GO:0003730: mRNA 3'-UTR binding	2.32E-03
33	GO:0004144: diacylglycerol O-acyltransferase activity	2.32E-03
34	GO:0004559: alpha-mannosidase activity	2.32E-03
35	GO:0019899: enzyme binding	2.74E-03
36	GO:0008235: metalloexopeptidase activity	2.74E-03
37	GO:0005375: copper ion transmembrane transporter activity	3.63E-03
38	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	3.63E-03
39	GO:0003747: translation release factor activity	4.10E-03
40	GO:0009672: auxin:proton symporter activity	4.60E-03
41	GO:0004185: serine-type carboxypeptidase activity	5.03E-03
42	GO:0015020: glucuronosyltransferase activity	5.11E-03
43	GO:0005089: Rho guanyl-nucleotide exchange factor activity	5.65E-03
44	GO:0008327: methyl-CpG binding	5.65E-03
45	GO:0001054: RNA polymerase I activity	5.65E-03
46	GO:0004177: aminopeptidase activity	5.65E-03
47	GO:0010329: auxin efflux transmembrane transporter activity	6.78E-03
48	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.78E-03
49	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.37E-03
50	GO:0030246: carbohydrate binding	8.42E-03
51	GO:0043130: ubiquitin binding	9.26E-03
52	GO:0005345: purine nucleobase transmembrane transporter activity	9.92E-03
53	GO:0030570: pectate lyase activity	1.20E-02
54	GO:0004812: aminoacyl-tRNA ligase activity	1.35E-02
55	GO:0004402: histone acetyltransferase activity	1.43E-02
56	GO:0008536: Ran GTPase binding	1.50E-02
57	GO:0008080: N-acetyltransferase activity	1.50E-02
58	GO:0001085: RNA polymerase II transcription factor binding	1.50E-02
59	GO:0016853: isomerase activity	1.58E-02
60	GO:0004518: nuclease activity	1.83E-02
61	GO:0003684: damaged DNA binding	2.00E-02
62	GO:0008237: metallopeptidase activity	2.09E-02
63	GO:0016413: O-acetyltransferase activity	2.18E-02
64	GO:0046872: metal ion binding	2.20E-02
65	GO:0030247: polysaccharide binding	2.55E-02
66	GO:0004721: phosphoprotein phosphatase activity	2.55E-02
67	GO:0004806: triglyceride lipase activity	2.55E-02
68	GO:0003682: chromatin binding	2.75E-02
69	GO:0004222: metalloendopeptidase activity	2.94E-02
70	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.04E-02
71	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.11E-02
72	GO:0008233: peptidase activity	3.16E-02
73	GO:0003697: single-stranded DNA binding	3.24E-02
74	GO:0042393: histone binding	3.56E-02
75	GO:0051537: 2 iron, 2 sulfur cluster binding	4.11E-02
76	GO:0043621: protein self-association	4.11E-02
77	GO:0003924: GTPase activity	4.73E-02
78	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.80E-02
79	GO:0003676: nucleic acid binding	4.81E-02
80	GO:0003690: double-stranded DNA binding	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0009507: chloroplast	1.18E-05
3	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	1.77E-04
4	GO:0010370: perinucleolar chromocenter	1.77E-04
5	GO:0009505: plant-type cell wall	4.90E-04
6	GO:0009897: external side of plasma membrane	6.55E-04
7	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.24E-03
8	GO:0072686: mitotic spindle	1.57E-03
9	GO:0010005: cortical microtubule, transverse to long axis	2.32E-03
10	GO:0005802: trans-Golgi network	2.87E-03
11	GO:0005768: endosome	3.59E-03
12	GO:0005811: lipid particle	3.63E-03
13	GO:0046658: anchored component of plasma membrane	4.05E-03
14	GO:0005720: nuclear heterochromatin	4.10E-03
15	GO:0005736: DNA-directed RNA polymerase I complex	4.10E-03
16	GO:0055028: cortical microtubule	5.11E-03
17	GO:0016324: apical plasma membrane	5.11E-03
18	GO:0005938: cell cortex	6.78E-03
19	GO:0009574: preprophase band	6.78E-03
20	GO:0045271: respiratory chain complex I	9.92E-03
21	GO:0031225: anchored component of membrane	1.05E-02
22	GO:0009570: chloroplast stroma	1.76E-02
23	GO:0009295: nucleoid	2.09E-02
24	GO:0005667: transcription factor complex	2.45E-02
25	GO:0009707: chloroplast outer membrane	2.74E-02
26	GO:0005789: endoplasmic reticulum membrane	2.93E-02
27	GO:0005819: spindle	3.45E-02
28	GO:0005856: cytoskeleton	4.22E-02
29	GO:0031966: mitochondrial membrane	4.56E-02