co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G45191

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
2	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
3	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
4	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
5	GO:0042407: cristae formation	0.00E+00
6	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
7	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
8	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
9	GO:0031222: arabinan catabolic process	0.00E+00
10	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
11	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
12	GO:0061157: mRNA destabilization	0.00E+00
13	GO:0002184: cytoplasmic translational termination	0.00E+00
14	GO:0043392: negative regulation of DNA binding	0.00E+00
15	GO:0017038: protein import	0.00E+00
16	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
17	GO:0046620: regulation of organ growth	1.98E-06
18	GO:0005983: starch catabolic process	2.06E-05
19	GO:0018026: peptidyl-lysine monomethylation	2.46E-05
20	GO:0009658: chloroplast organization	2.46E-05
21	GO:0009733: response to auxin	4.53E-05
22	GO:0048437: floral organ development	5.26E-05
23	GO:0046739: transport of virus in multicellular host	1.63E-04
24	GO:0010588: cotyledon vascular tissue pattern formation	4.00E-04
25	GO:2000012: regulation of auxin polar transport	4.00E-04
26	GO:0009734: auxin-activated signaling pathway	4.99E-04
27	GO:0042793: transcription from plastid promoter	5.68E-04
28	GO:0010027: thylakoid membrane organization	6.23E-04
29	GO:2000033: regulation of seed dormancy process	7.50E-04
30	GO:0042372: phylloquinone biosynthetic process	7.50E-04
31	GO:0000025: maltose catabolic process	7.62E-04
32	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	7.62E-04
33	GO:0010063: positive regulation of trichoblast fate specification	7.62E-04
34	GO:0010480: microsporocyte differentiation	7.62E-04
35	GO:0080112: seed growth	7.62E-04
36	GO:0005980: glycogen catabolic process	7.62E-04
37	GO:0030198: extracellular matrix organization	7.62E-04
38	GO:0042371: vitamin K biosynthetic process	7.62E-04
39	GO:0043686: co-translational protein modification	7.62E-04
40	GO:0046520: sphingoid biosynthetic process	7.62E-04
41	GO:0043007: maintenance of rDNA	7.62E-04
42	GO:0051247: positive regulation of protein metabolic process	7.62E-04
43	GO:1902458: positive regulation of stomatal opening	7.62E-04
44	GO:0015904: tetracycline transport	7.62E-04
45	GO:2000905: negative regulation of starch metabolic process	7.62E-04
46	GO:0005991: trehalose metabolic process	7.62E-04
47	GO:0000305: response to oxygen radical	7.62E-04
48	GO:0000023: maltose metabolic process	7.62E-04
49	GO:1905039: carboxylic acid transmembrane transport	7.62E-04
50	GO:1905200: gibberellic acid transmembrane transport	7.62E-04
51	GO:0040008: regulation of growth	7.84E-04
52	GO:0015995: chlorophyll biosynthetic process	8.03E-04
53	GO:0009416: response to light stimulus	9.19E-04
54	GO:2000070: regulation of response to water deprivation	1.19E-03
55	GO:0009742: brassinosteroid mediated signaling pathway	1.40E-03
56	GO:0010497: plasmodesmata-mediated intercellular transport	1.45E-03
57	GO:0007154: cell communication	1.65E-03
58	GO:0071497: cellular response to freezing	1.65E-03
59	GO:0090342: regulation of cell aging	1.65E-03
60	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.65E-03
61	GO:1900033: negative regulation of trichome patterning	1.65E-03
62	GO:1904143: positive regulation of carotenoid biosynthetic process	1.65E-03
63	GO:0009786: regulation of asymmetric cell division	1.65E-03
64	GO:0006423: cysteinyl-tRNA aminoacylation	1.65E-03
65	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.65E-03
66	GO:0006568: tryptophan metabolic process	1.65E-03
67	GO:2000123: positive regulation of stomatal complex development	1.65E-03
68	GO:0009629: response to gravity	1.65E-03
69	GO:0019388: galactose catabolic process	1.65E-03
70	GO:1900871: chloroplast mRNA modification	1.65E-03
71	GO:0010182: sugar mediated signaling pathway	1.74E-03
72	GO:0010305: leaf vascular tissue pattern formation	1.74E-03
73	GO:1900865: chloroplast RNA modification	2.06E-03
74	GO:0009638: phototropism	2.06E-03
75	GO:0048829: root cap development	2.41E-03
76	GO:0009790: embryo development	2.48E-03
77	GO:0010583: response to cyclopentenone	2.49E-03
78	GO:0019419: sulfate reduction	2.73E-03
79	GO:0006696: ergosterol biosynthetic process	2.73E-03
80	GO:0048586: regulation of long-day photoperiodism, flowering	2.73E-03
81	GO:0033591: response to L-ascorbic acid	2.73E-03
82	GO:0009773: photosynthetic electron transport in photosystem I	2.80E-03
83	GO:0010628: positive regulation of gene expression	3.65E-03
84	GO:0006006: glucose metabolic process	3.65E-03
85	GO:0009590: detection of gravity	3.97E-03
86	GO:0006168: adenine salvage	3.97E-03
87	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.97E-03
88	GO:0043572: plastid fission	3.97E-03
89	GO:0010321: regulation of vegetative phase change	3.97E-03
90	GO:1990019: protein storage vacuole organization	3.97E-03
91	GO:0016556: mRNA modification	3.97E-03
92	GO:0010371: regulation of gibberellin biosynthetic process	3.97E-03
93	GO:0045338: farnesyl diphosphate metabolic process	3.97E-03
94	GO:0006166: purine ribonucleoside salvage	3.97E-03
95	GO:0010071: root meristem specification	3.97E-03
96	GO:0009102: biotin biosynthetic process	3.97E-03
97	GO:0010306: rhamnogalacturonan II biosynthetic process	3.97E-03
98	GO:0010601: positive regulation of auxin biosynthetic process	3.97E-03
99	GO:0010731: protein glutathionylation	3.97E-03
100	GO:0010020: chloroplast fission	4.13E-03
101	GO:0048367: shoot system development	4.30E-03
102	GO:0022622: root system development	5.36E-03
103	GO:0006221: pyrimidine nucleotide biosynthetic process	5.36E-03
104	GO:0009755: hormone-mediated signaling pathway	5.36E-03
105	GO:0006749: glutathione metabolic process	5.36E-03
106	GO:1901141: regulation of lignin biosynthetic process	5.36E-03
107	GO:0048629: trichome patterning	5.36E-03
108	GO:0010109: regulation of photosynthesis	5.36E-03
109	GO:0042274: ribosomal small subunit biogenesis	5.36E-03
110	GO:0009765: photosynthesis, light harvesting	5.36E-03
111	GO:2000038: regulation of stomatal complex development	5.36E-03
112	GO:2000306: positive regulation of photomorphogenesis	5.36E-03
113	GO:0006418: tRNA aminoacylation for protein translation	6.36E-03
114	GO:0016042: lipid catabolic process	6.45E-03
115	GO:0010375: stomatal complex patterning	6.90E-03
116	GO:0032543: mitochondrial translation	6.90E-03
117	GO:0010236: plastoquinone biosynthetic process	6.90E-03
118	GO:0045038: protein import into chloroplast thylakoid membrane	6.90E-03
119	GO:0048497: maintenance of floral organ identity	6.90E-03
120	GO:0016120: carotene biosynthetic process	6.90E-03
121	GO:0031365: N-terminal protein amino acid modification	6.90E-03
122	GO:0016123: xanthophyll biosynthetic process	6.90E-03
123	GO:0044209: AMP salvage	6.90E-03
124	GO:0010438: cellular response to sulfur starvation	6.90E-03
125	GO:0061077: chaperone-mediated protein folding	7.00E-03
126	GO:0016554: cytidine to uridine editing	8.58E-03
127	GO:0018258: protein O-linked glycosylation via hydroxyproline	8.58E-03
128	GO:0000741: karyogamy	8.58E-03
129	GO:0010405: arabinogalactan protein metabolic process	8.58E-03
130	GO:0009913: epidermal cell differentiation	8.58E-03
131	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	8.58E-03
132	GO:0009959: negative gravitropism	8.58E-03
133	GO:1902456: regulation of stomatal opening	8.58E-03
134	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	8.58E-03
135	GO:0006631: fatty acid metabolic process	8.76E-03
136	GO:0009926: auxin polar transport	9.73E-03
137	GO:0009640: photomorphogenesis	9.73E-03
138	GO:0009793: embryo development ending in seed dormancy	9.75E-03
139	GO:0016117: carotenoid biosynthetic process	9.91E-03
140	GO:0006508: proteolysis	1.03E-02
141	GO:0009082: branched-chain amino acid biosynthetic process	1.04E-02
142	GO:0006458: 'de novo' protein folding	1.04E-02
143	GO:0048280: vesicle fusion with Golgi apparatus	1.04E-02
144	GO:0048509: regulation of meristem development	1.04E-02
145	GO:0009099: valine biosynthetic process	1.04E-02
146	GO:0030488: tRNA methylation	1.04E-02
147	GO:0042026: protein refolding	1.04E-02
148	GO:1901259: chloroplast rRNA processing	1.04E-02
149	GO:0031930: mitochondria-nucleus signaling pathway	1.04E-02
150	GO:0080086: stamen filament development	1.04E-02
151	GO:0010310: regulation of hydrogen peroxide metabolic process	1.04E-02
152	GO:0009955: adaxial/abaxial pattern specification	1.04E-02
153	GO:0080022: primary root development	1.07E-02
154	GO:0010087: phloem or xylem histogenesis	1.07E-02
155	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.11E-02
156	GO:0006662: glycerol ether metabolic process	1.16E-02
157	GO:0010197: polar nucleus fusion	1.16E-02
158	GO:0009741: response to brassinosteroid	1.16E-02
159	GO:0009958: positive gravitropism	1.16E-02
160	GO:0006855: drug transmembrane transport	1.19E-02
161	GO:0010444: guard mother cell differentiation	1.23E-02
162	GO:0030307: positive regulation of cell growth	1.23E-02
163	GO:0032880: regulation of protein localization	1.23E-02
164	GO:0010161: red light signaling pathway	1.23E-02
165	GO:0006955: immune response	1.23E-02
166	GO:0009772: photosynthetic electron transport in photosystem II	1.23E-02
167	GO:0010098: suspensor development	1.23E-02
168	GO:0009646: response to absence of light	1.25E-02
169	GO:0019252: starch biosynthetic process	1.34E-02
170	GO:0048825: cotyledon development	1.34E-02
171	GO:0006605: protein targeting	1.44E-02
172	GO:0005978: glycogen biosynthetic process	1.44E-02
173	GO:0010078: maintenance of root meristem identity	1.44E-02
174	GO:0009819: drought recovery	1.44E-02
175	GO:0000105: histidine biosynthetic process	1.44E-02
176	GO:0070413: trehalose metabolism in response to stress	1.44E-02
177	GO:0052543: callose deposition in cell wall	1.44E-02
178	GO:0010439: regulation of glucosinolate biosynthetic process	1.44E-02
179	GO:0045454: cell redox homeostasis	1.44E-02
180	GO:0032502: developmental process	1.53E-02
181	GO:0006857: oligopeptide transport	1.56E-02
182	GO:0007165: signal transduction	1.60E-02
183	GO:1901657: glycosyl compound metabolic process	1.64E-02
184	GO:0009097: isoleucine biosynthetic process	1.65E-02
185	GO:0010100: negative regulation of photomorphogenesis	1.65E-02
186	GO:0006526: arginine biosynthetic process	1.65E-02
187	GO:0007186: G-protein coupled receptor signaling pathway	1.65E-02
188	GO:0032544: plastid translation	1.65E-02
189	GO:0009657: plastid organization	1.65E-02
190	GO:0043562: cellular response to nitrogen levels	1.65E-02
191	GO:0010099: regulation of photomorphogenesis	1.65E-02
192	GO:0015996: chlorophyll catabolic process	1.65E-02
193	GO:0030154: cell differentiation	1.71E-02
194	GO:0009828: plant-type cell wall loosening	1.74E-02
195	GO:0046916: cellular transition metal ion homeostasis	1.88E-02
196	GO:0006783: heme biosynthetic process	1.88E-02
197	GO:0048507: meristem development	1.88E-02
198	GO:0000902: cell morphogenesis	1.88E-02
199	GO:0046685: response to arsenic-containing substance	1.88E-02
200	GO:0010206: photosystem II repair	1.88E-02
201	GO:0009740: gibberellic acid mediated signaling pathway	2.07E-02
202	GO:0009098: leucine biosynthetic process	2.12E-02
203	GO:0031425: chloroplast RNA processing	2.12E-02
204	GO:0043067: regulation of programmed cell death	2.12E-02
205	GO:0010029: regulation of seed germination	2.21E-02
206	GO:0009607: response to biotic stimulus	2.21E-02
207	GO:0010162: seed dormancy process	2.37E-02
208	GO:0000103: sulfate assimilation	2.37E-02
209	GO:0006896: Golgi to vacuole transport	2.37E-02
210	GO:0045036: protein targeting to chloroplast	2.37E-02
211	GO:0009641: shade avoidance	2.37E-02
212	GO:0016441: posttranscriptional gene silencing	2.37E-02
213	GO:0009299: mRNA transcription	2.37E-02
214	GO:0010629: negative regulation of gene expression	2.37E-02
215	GO:0009698: phenylpropanoid metabolic process	2.62E-02
216	GO:0009682: induced systemic resistance	2.62E-02
217	GO:0048229: gametophyte development	2.62E-02
218	GO:0015770: sucrose transport	2.62E-02
219	GO:0009684: indoleacetic acid biosynthetic process	2.62E-02
220	GO:0010015: root morphogenesis	2.62E-02
221	GO:0000038: very long-chain fatty acid metabolic process	2.62E-02
222	GO:0009073: aromatic amino acid family biosynthetic process	2.62E-02
223	GO:0048481: plant ovule development	2.73E-02
224	GO:0009813: flavonoid biosynthetic process	2.86E-02
225	GO:0006820: anion transport	2.89E-02
226	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.89E-02
227	GO:0045037: protein import into chloroplast stroma	2.89E-02
228	GO:0007275: multicellular organism development	2.98E-02
229	GO:0048366: leaf development	3.08E-02
230	GO:0048527: lateral root development	3.15E-02
231	GO:0010102: lateral root morphogenesis	3.17E-02
232	GO:0009785: blue light signaling pathway	3.17E-02
233	GO:0050826: response to freezing	3.17E-02
234	GO:0009718: anthocyanin-containing compound biosynthetic process	3.17E-02
235	GO:0010075: regulation of meristem growth	3.17E-02
236	GO:0009725: response to hormone	3.17E-02
237	GO:0009767: photosynthetic electron transport chain	3.17E-02
238	GO:0009266: response to temperature stimulus	3.45E-02
239	GO:0009934: regulation of meristem structural organization	3.45E-02
240	GO:0010207: photosystem II assembly	3.45E-02
241	GO:0048467: gynoecium development	3.45E-02
242	GO:0005975: carbohydrate metabolic process	3.56E-02
243	GO:0034599: cellular response to oxidative stress	3.61E-02
244	GO:0009901: anther dehiscence	3.75E-02
245	GO:0090351: seedling development	3.75E-02
246	GO:0010030: positive regulation of seed germination	3.75E-02
247	GO:0070588: calcium ion transmembrane transport	3.75E-02
248	GO:0019853: L-ascorbic acid biosynthetic process	3.75E-02
249	GO:0006071: glycerol metabolic process	4.05E-02
250	GO:0019762: glucosinolate catabolic process	4.05E-02
251	GO:0000162: tryptophan biosynthetic process	4.05E-02
252	GO:0005992: trehalose biosynthetic process	4.36E-02
253	GO:0010187: negative regulation of seed germination	4.36E-02
254	GO:0019344: cysteine biosynthetic process	4.36E-02
255	GO:0080147: root hair cell development	4.36E-02
256	GO:0009451: RNA modification	4.54E-02
257	GO:0019953: sexual reproduction	4.67E-02
258	GO:0003333: amino acid transmembrane transport	4.99E-02
259	GO:0048278: vesicle docking	4.99E-02
260	GO:0016998: cell wall macromolecule catabolic process	4.99E-02
261	GO:0048511: rhythmic process	4.99E-02
262	GO:0010431: seed maturation	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005363: maltose transmembrane transporter activity	0.00E+00
2	GO:0090711: FMN hydrolase activity	0.00E+00
3	GO:0010303: limit dextrinase activity	0.00E+00
4	GO:0004823: leucine-tRNA ligase activity	0.00E+00
5	GO:0047661: amino-acid racemase activity	0.00E+00
6	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
7	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
8	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
9	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
10	GO:0051060: pullulanase activity	0.00E+00
11	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
12	GO:0015267: channel activity	0.00E+00
13	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
14	GO:0097100: supercoiled DNA binding	0.00E+00
15	GO:0005201: extracellular matrix structural constituent	0.00E+00
16	GO:0004076: biotin synthase activity	0.00E+00
17	GO:0071633: dihydroceramidase activity	0.00E+00
18	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
19	GO:0002161: aminoacyl-tRNA editing activity	7.90E-05
20	GO:0005504: fatty acid binding	7.90E-05
21	GO:0016279: protein-lysine N-methyltransferase activity	2.73E-04
22	GO:0045430: chalcone isomerase activity	2.73E-04
23	GO:0019203: carbohydrate phosphatase activity	7.62E-04
24	GO:0042834: peptidoglycan binding	7.62E-04
25	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	7.62E-04
26	GO:0005080: protein kinase C binding	7.62E-04
27	GO:0050308: sugar-phosphatase activity	7.62E-04
28	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	7.62E-04
29	GO:0042586: peptide deformylase activity	7.62E-04
30	GO:0010313: phytochrome binding	7.62E-04
31	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	7.62E-04
32	GO:0000170: sphingosine hydroxylase activity	7.62E-04
33	GO:0050139: nicotinate-N-glucosyltransferase activity	7.62E-04
34	GO:0004856: xylulokinase activity	7.62E-04
35	GO:0004425: indole-3-glycerol-phosphate synthase activity	7.62E-04
36	GO:0004134: 4-alpha-glucanotransferase activity	7.62E-04
37	GO:0004645: phosphorylase activity	7.62E-04
38	GO:1905201: gibberellin transmembrane transporter activity	7.62E-04
39	GO:0008184: glycogen phosphorylase activity	7.62E-04
40	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.65E-03
41	GO:0042284: sphingolipid delta-4 desaturase activity	1.65E-03
42	GO:0008493: tetracycline transporter activity	1.65E-03
43	GO:0017118: lipoyltransferase activity	1.65E-03
44	GO:0004362: glutathione-disulfide reductase activity	1.65E-03
45	GO:0043425: bHLH transcription factor binding	1.65E-03
46	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.65E-03
47	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	1.65E-03
48	GO:0009973: adenylyl-sulfate reductase activity	1.65E-03
49	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.65E-03
50	GO:0016630: protochlorophyllide reductase activity	1.65E-03
51	GO:0004817: cysteine-tRNA ligase activity	1.65E-03
52	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	1.65E-03
53	GO:0004614: phosphoglucomutase activity	1.65E-03
54	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.70E-03
55	GO:0045174: glutathione dehydrogenase (ascorbate) activity	2.73E-03
56	GO:0003913: DNA photolyase activity	2.73E-03
57	GO:0004148: dihydrolipoyl dehydrogenase activity	2.73E-03
58	GO:0016805: dipeptidase activity	2.73E-03
59	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.73E-03
60	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.73E-03
61	GO:0004180: carboxypeptidase activity	2.73E-03
62	GO:0052656: L-isoleucine transaminase activity	3.97E-03
63	GO:0009041: uridylate kinase activity	3.97E-03
64	GO:0043023: ribosomal large subunit binding	3.97E-03
65	GO:0052654: L-leucine transaminase activity	3.97E-03
66	GO:0016851: magnesium chelatase activity	3.97E-03
67	GO:0052655: L-valine transaminase activity	3.97E-03
68	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	3.97E-03
69	GO:0003999: adenine phosphoribosyltransferase activity	3.97E-03
70	GO:0004084: branched-chain-amino-acid transaminase activity	5.36E-03
71	GO:0019199: transmembrane receptor protein kinase activity	5.36E-03
72	GO:0046556: alpha-L-arabinofuranosidase activity	5.36E-03
73	GO:0004659: prenyltransferase activity	5.36E-03
74	GO:0015238: drug transmembrane transporter activity	5.52E-03
75	GO:0005528: FK506 binding	5.75E-03
76	GO:0016846: carbon-sulfur lyase activity	6.90E-03
77	GO:0016773: phosphotransferase activity, alcohol group as acceptor	6.90E-03
78	GO:0003959: NADPH dehydrogenase activity	6.90E-03
79	GO:0004176: ATP-dependent peptidase activity	7.00E-03
80	GO:0016788: hydrolase activity, acting on ester bonds	7.45E-03
81	GO:0004556: alpha-amylase activity	8.58E-03
82	GO:0016208: AMP binding	8.58E-03
83	GO:0004629: phospholipase C activity	8.58E-03
84	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	8.58E-03
85	GO:0035673: oligopeptide transmembrane transporter activity	8.58E-03
86	GO:2001070: starch binding	8.58E-03
87	GO:0080030: methyl indole-3-acetate esterase activity	8.58E-03
88	GO:1990714: hydroxyproline O-galactosyltransferase activity	8.58E-03
89	GO:0003727: single-stranded RNA binding	9.13E-03
90	GO:0047134: protein-disulfide reductase activity	9.91E-03
91	GO:0004812: aminoacyl-tRNA ligase activity	9.91E-03
92	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.04E-02
93	GO:0004435: phosphatidylinositol phospholipase C activity	1.04E-02
94	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.04E-02
95	GO:0008195: phosphatidate phosphatase activity	1.04E-02
96	GO:0035091: phosphatidylinositol binding	1.08E-02
97	GO:0001085: RNA polymerase II transcription factor binding	1.16E-02
98	GO:0004791: thioredoxin-disulfide reductase activity	1.25E-02
99	GO:0044212: transcription regulatory region DNA binding	1.40E-02
100	GO:0004033: aldo-keto reductase (NADP) activity	1.44E-02
101	GO:0008173: RNA methyltransferase activity	1.65E-02
102	GO:0046914: transition metal ion binding	1.65E-02
103	GO:0003824: catalytic activity	1.74E-02
104	GO:0005215: transporter activity	1.77E-02
105	GO:0008237: metallopeptidase activity	1.85E-02
106	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.88E-02
107	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.88E-02
108	GO:0016207: 4-coumarate-CoA ligase activity	1.88E-02
109	GO:0004519: endonuclease activity	2.37E-02
110	GO:0030234: enzyme regulator activity	2.37E-02
111	GO:0015020: glucuronosyltransferase activity	2.37E-02
112	GO:0102483: scopolin beta-glucosidase activity	2.46E-02
113	GO:0008559: xenobiotic-transporting ATPase activity	2.62E-02
114	GO:0044183: protein binding involved in protein folding	2.62E-02
115	GO:0047372: acylglycerol lipase activity	2.62E-02
116	GO:0008515: sucrose transmembrane transporter activity	2.62E-02
117	GO:0000049: tRNA binding	2.89E-02
118	GO:0015198: oligopeptide transporter activity	2.89E-02
119	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.89E-02
120	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.06E-02
121	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.15E-02
122	GO:0004089: carbonate dehydratase activity	3.17E-02
123	GO:0005262: calcium channel activity	3.17E-02
124	GO:0003725: double-stranded RNA binding	3.17E-02
125	GO:0004252: serine-type endopeptidase activity	3.38E-02
126	GO:0008266: poly(U) RNA binding	3.45E-02
127	GO:0008083: growth factor activity	3.45E-02
128	GO:0016787: hydrolase activity	3.64E-02
129	GO:0008146: sulfotransferase activity	3.75E-02
130	GO:0051119: sugar transmembrane transporter activity	3.75E-02
131	GO:0008422: beta-glucosidase activity	3.77E-02
132	GO:0000149: SNARE binding	3.77E-02
133	GO:0052689: carboxylic ester hydrolase activity	3.84E-02
134	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.05E-02
135	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.05E-02
136	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.05E-02
137	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.05E-02
138	GO:0015297: antiporter activity	4.17E-02
139	GO:0004364: glutathione transferase activity	4.27E-02
140	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.31E-02
141	GO:0005484: SNAP receptor activity	4.44E-02
142	GO:0004871: signal transducer activity	4.61E-02
143	GO:0005345: purine nucleobase transmembrane transporter activity	4.67E-02
144	GO:0043621: protein self-association	4.80E-02
145	GO:0033612: receptor serine/threonine kinase binding	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	2.71E-16
2	GO:0009507: chloroplast	1.14E-15
3	GO:0009534: chloroplast thylakoid	4.17E-05
4	GO:0009941: chloroplast envelope	2.07E-04
5	GO:0031969: chloroplast membrane	2.48E-04
6	GO:0009508: plastid chromosome	4.00E-04
7	GO:0009295: nucleoid	5.20E-04
8	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.65E-03
9	GO:0019897: extrinsic component of plasma membrane	2.73E-03
10	GO:0010007: magnesium chelatase complex	2.73E-03
11	GO:0030139: endocytic vesicle	2.73E-03
12	GO:0009528: plastid inner membrane	2.73E-03
13	GO:0010319: stromule	3.16E-03
14	GO:0032585: multivesicular body membrane	3.97E-03
15	GO:0005886: plasma membrane	4.82E-03
16	GO:0009707: chloroplast outer membrane	5.18E-03
17	GO:0009544: chloroplast ATP synthase complex	5.36E-03
18	GO:0009527: plastid outer membrane	5.36E-03
19	GO:0009532: plastid stroma	7.00E-03
20	GO:0009543: chloroplast thylakoid lumen	7.67E-03
21	GO:0009535: chloroplast thylakoid membrane	8.89E-03
22	GO:0009536: plastid	9.47E-03
23	GO:0009840: chloroplastic endopeptidase Clp complex	1.04E-02
24	GO:0009579: thylakoid	1.11E-02
25	GO:0009986: cell surface	1.23E-02
26	GO:0012507: ER to Golgi transport vesicle membrane	1.44E-02
27	GO:0009501: amyloplast	1.44E-02
28	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.88E-02
29	GO:0009706: chloroplast inner membrane	2.23E-02
30	GO:0005667: transcription factor complex	2.33E-02
31	GO:0000418: DNA-directed RNA polymerase IV complex	2.37E-02
32	GO:0090404: pollen tube tip	2.62E-02
33	GO:0005578: proteinaceous extracellular matrix	3.17E-02
34	GO:0031902: late endosome membrane	4.10E-02
35	GO:0031977: thylakoid lumen	4.10E-02
36	GO:0031201: SNARE complex	4.10E-02
37	GO:0009654: photosystem II oxygen evolving complex	4.67E-02
38	GO:0031225: anchored component of membrane	4.70E-02