GO Enrichment Analysis of Co-expressed Genes with
AT1G43670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090391: granum assembly | 1.89E-06 |
| 2 | GO:0015995: chlorophyll biosynthetic process | 3.18E-06 |
| 3 | GO:0015979: photosynthesis | 3.64E-06 |
| 4 | GO:0010196: nonphotochemical quenching | 4.14E-05 |
| 5 | GO:0010206: photosystem II repair | 8.49E-05 |
| 6 | GO:0071588: hydrogen peroxide mediated signaling pathway | 9.69E-05 |
| 7 | GO:0000023: maltose metabolic process | 9.69E-05 |
| 8 | GO:0000025: maltose catabolic process | 9.69E-05 |
| 9 | GO:0055114: oxidation-reduction process | 1.16E-04 |
| 10 | GO:0009631: cold acclimation | 1.32E-04 |
| 11 | GO:0009773: photosynthetic electron transport in photosystem I | 1.44E-04 |
| 12 | GO:0034599: cellular response to oxidative stress | 1.60E-04 |
| 13 | GO:0005983: starch catabolic process | 1.68E-04 |
| 14 | GO:0010353: response to trehalose | 2.28E-04 |
| 15 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.28E-04 |
| 16 | GO:0015804: neutral amino acid transport | 2.28E-04 |
| 17 | GO:0005976: polysaccharide metabolic process | 2.28E-04 |
| 18 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.77E-04 |
| 19 | GO:0061077: chaperone-mediated protein folding | 3.74E-04 |
| 20 | GO:0006000: fructose metabolic process | 3.80E-04 |
| 21 | GO:0006518: peptide metabolic process | 3.80E-04 |
| 22 | GO:0010021: amylopectin biosynthetic process | 7.26E-04 |
| 23 | GO:0006109: regulation of carbohydrate metabolic process | 7.26E-04 |
| 24 | GO:0000302: response to reactive oxygen species | 7.47E-04 |
| 25 | GO:0016123: xanthophyll biosynthetic process | 9.17E-04 |
| 26 | GO:0010027: thylakoid membrane organization | 1.06E-03 |
| 27 | GO:0009735: response to cytokinin | 1.31E-03 |
| 28 | GO:0010019: chloroplast-nucleus signaling pathway | 1.34E-03 |
| 29 | GO:0009610: response to symbiotic fungus | 1.57E-03 |
| 30 | GO:0009772: photosynthetic electron transport in photosystem II | 1.57E-03 |
| 31 | GO:0009642: response to light intensity | 1.81E-03 |
| 32 | GO:0030091: protein repair | 1.81E-03 |
| 33 | GO:0006002: fructose 6-phosphate metabolic process | 2.07E-03 |
| 34 | GO:0010114: response to red light | 2.21E-03 |
| 35 | GO:0006754: ATP biosynthetic process | 2.33E-03 |
| 36 | GO:0010205: photoinhibition | 2.61E-03 |
| 37 | GO:0009688: abscisic acid biosynthetic process | 2.90E-03 |
| 38 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.20E-03 |
| 39 | GO:0043085: positive regulation of catalytic activity | 3.20E-03 |
| 40 | GO:0018107: peptidyl-threonine phosphorylation | 3.82E-03 |
| 41 | GO:0006094: gluconeogenesis | 3.82E-03 |
| 42 | GO:0005986: sucrose biosynthetic process | 3.82E-03 |
| 43 | GO:0009266: response to temperature stimulus | 4.15E-03 |
| 44 | GO:0019253: reductive pentose-phosphate cycle | 4.15E-03 |
| 45 | GO:0071732: cellular response to nitric oxide | 4.49E-03 |
| 46 | GO:0005985: sucrose metabolic process | 4.49E-03 |
| 47 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.55E-03 |
| 48 | GO:0003333: amino acid transmembrane transport | 5.93E-03 |
| 49 | GO:0042744: hydrogen peroxide catabolic process | 5.98E-03 |
| 50 | GO:0019748: secondary metabolic process | 6.31E-03 |
| 51 | GO:0035428: hexose transmembrane transport | 6.31E-03 |
| 52 | GO:0006633: fatty acid biosynthetic process | 6.59E-03 |
| 53 | GO:0071369: cellular response to ethylene stimulus | 6.70E-03 |
| 54 | GO:0070417: cellular response to cold | 7.51E-03 |
| 55 | GO:0006810: transport | 7.84E-03 |
| 56 | GO:0006606: protein import into nucleus | 7.93E-03 |
| 57 | GO:0006662: glycerol ether metabolic process | 8.35E-03 |
| 58 | GO:0010182: sugar mediated signaling pathway | 8.35E-03 |
| 59 | GO:0046323: glucose import | 8.35E-03 |
| 60 | GO:0015986: ATP synthesis coupled proton transport | 8.79E-03 |
| 61 | GO:0019252: starch biosynthetic process | 9.23E-03 |
| 62 | GO:0071281: cellular response to iron ion | 1.06E-02 |
| 63 | GO:0042254: ribosome biogenesis | 1.14E-02 |
| 64 | GO:0016311: dephosphorylation | 1.46E-02 |
| 65 | GO:0018298: protein-chromophore linkage | 1.51E-02 |
| 66 | GO:0009817: defense response to fungus, incompatible interaction | 1.51E-02 |
| 67 | GO:0010218: response to far red light | 1.62E-02 |
| 68 | GO:0007568: aging | 1.68E-02 |
| 69 | GO:0006865: amino acid transport | 1.73E-02 |
| 70 | GO:0006412: translation | 1.75E-02 |
| 71 | GO:0009637: response to blue light | 1.79E-02 |
| 72 | GO:0006979: response to oxidative stress | 1.88E-02 |
| 73 | GO:0032259: methylation | 1.97E-02 |
| 74 | GO:0006629: lipid metabolic process | 2.06E-02 |
| 75 | GO:0043086: negative regulation of catalytic activity | 2.99E-02 |
| 76 | GO:0018105: peptidyl-serine phosphorylation | 3.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 4 | GO:0005528: FK506 binding | 8.96E-06 |
| 5 | GO:0004130: cytochrome-c peroxidase activity | 2.15E-05 |
| 6 | GO:0050521: alpha-glucan, water dikinase activity | 9.69E-05 |
| 7 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 9.69E-05 |
| 8 | GO:0045485: omega-6 fatty acid desaturase activity | 9.69E-05 |
| 9 | GO:0004134: 4-alpha-glucanotransferase activity | 9.69E-05 |
| 10 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.28E-04 |
| 11 | GO:0015172: acidic amino acid transmembrane transporter activity | 2.28E-04 |
| 12 | GO:0042389: omega-3 fatty acid desaturase activity | 2.28E-04 |
| 13 | GO:0010297: heteropolysaccharide binding | 2.28E-04 |
| 14 | GO:0033201: alpha-1,4-glucan synthase activity | 2.28E-04 |
| 15 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.28E-04 |
| 16 | GO:0008967: phosphoglycolate phosphatase activity | 2.28E-04 |
| 17 | GO:0018708: thiol S-methyltransferase activity | 2.28E-04 |
| 18 | GO:0016630: protochlorophyllide reductase activity | 2.28E-04 |
| 19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.64E-04 |
| 20 | GO:0070402: NADPH binding | 3.80E-04 |
| 21 | GO:0004324: ferredoxin-NADP+ reductase activity | 3.80E-04 |
| 22 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.80E-04 |
| 23 | GO:0004373: glycogen (starch) synthase activity | 3.80E-04 |
| 24 | GO:0019201: nucleotide kinase activity | 5.46E-04 |
| 25 | GO:0015175: neutral amino acid transmembrane transporter activity | 5.46E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 5.46E-04 |
| 27 | GO:0019843: rRNA binding | 6.69E-04 |
| 28 | GO:0004045: aminoacyl-tRNA hydrolase activity | 7.26E-04 |
| 29 | GO:0009011: starch synthase activity | 7.26E-04 |
| 30 | GO:0003959: NADPH dehydrogenase activity | 9.17E-04 |
| 31 | GO:0016688: L-ascorbate peroxidase activity | 1.12E-03 |
| 32 | GO:0008200: ion channel inhibitor activity | 1.12E-03 |
| 33 | GO:2001070: starch binding | 1.12E-03 |
| 34 | GO:0004602: glutathione peroxidase activity | 1.34E-03 |
| 35 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.34E-03 |
| 36 | GO:0004017: adenylate kinase activity | 1.34E-03 |
| 37 | GO:0016491: oxidoreductase activity | 1.59E-03 |
| 38 | GO:0004033: aldo-keto reductase (NADP) activity | 1.81E-03 |
| 39 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.07E-03 |
| 40 | GO:0071949: FAD binding | 2.33E-03 |
| 41 | GO:0030234: enzyme regulator activity | 2.90E-03 |
| 42 | GO:0008047: enzyme activator activity | 2.90E-03 |
| 43 | GO:0044183: protein binding involved in protein folding | 3.20E-03 |
| 44 | GO:0047372: acylglycerol lipase activity | 3.20E-03 |
| 45 | GO:0015386: potassium:proton antiporter activity | 3.20E-03 |
| 46 | GO:0031072: heat shock protein binding | 3.82E-03 |
| 47 | GO:0008266: poly(U) RNA binding | 4.15E-03 |
| 48 | GO:0031409: pigment binding | 4.83E-03 |
| 49 | GO:0004857: enzyme inhibitor activity | 5.19E-03 |
| 50 | GO:0015079: potassium ion transmembrane transporter activity | 5.55E-03 |
| 51 | GO:0003756: protein disulfide isomerase activity | 7.10E-03 |
| 52 | GO:0047134: protein-disulfide reductase activity | 7.51E-03 |
| 53 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 8.35E-03 |
| 54 | GO:0004791: thioredoxin-disulfide reductase activity | 8.79E-03 |
| 55 | GO:0005355: glucose transmembrane transporter activity | 8.79E-03 |
| 56 | GO:0048038: quinone binding | 9.68E-03 |
| 57 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.06E-02 |
| 58 | GO:0008168: methyltransferase activity | 1.08E-02 |
| 59 | GO:0003735: structural constituent of ribosome | 1.24E-02 |
| 60 | GO:0016168: chlorophyll binding | 1.30E-02 |
| 61 | GO:0016787: hydrolase activity | 1.39E-02 |
| 62 | GO:0004222: metalloendopeptidase activity | 1.62E-02 |
| 63 | GO:0003746: translation elongation factor activity | 1.79E-02 |
| 64 | GO:0003993: acid phosphatase activity | 1.85E-02 |
| 65 | GO:0004185: serine-type carboxypeptidase activity | 2.14E-02 |
| 66 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.27E-02 |
| 67 | GO:0015293: symporter activity | 2.33E-02 |
| 68 | GO:0015171: amino acid transmembrane transporter activity | 2.85E-02 |
| 69 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.05E-02 |
| 70 | GO:0051082: unfolded protein binding | 3.41E-02 |
| 71 | GO:0015035: protein disulfide oxidoreductase activity | 3.48E-02 |
| 72 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.07E-02 |
| 73 | GO:0015144: carbohydrate transmembrane transporter activity | 4.54E-02 |
| 74 | GO:0008565: protein transporter activity | 4.54E-02 |
| 75 | GO:0005351: sugar:proton symporter activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.30E-35 |
| 3 | GO:0009534: chloroplast thylakoid | 3.97E-33 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 9.32E-31 |
| 5 | GO:0009941: chloroplast envelope | 1.06E-19 |
| 6 | GO:0009579: thylakoid | 1.13E-13 |
| 7 | GO:0009570: chloroplast stroma | 1.74E-13 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.22E-07 |
| 9 | GO:0031977: thylakoid lumen | 2.69E-07 |
| 10 | GO:0031969: chloroplast membrane | 2.46E-06 |
| 11 | GO:0010287: plastoglobule | 5.85E-05 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.49E-05 |
| 13 | GO:0031357: integral component of chloroplast inner membrane | 2.28E-04 |
| 14 | GO:0010007: magnesium chelatase complex | 3.80E-04 |
| 15 | GO:0009706: chloroplast inner membrane | 5.05E-04 |
| 16 | GO:0009544: chloroplast ATP synthase complex | 7.26E-04 |
| 17 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.12E-03 |
| 18 | GO:0009501: amyloplast | 1.81E-03 |
| 19 | GO:0009538: photosystem I reaction center | 1.81E-03 |
| 20 | GO:0030076: light-harvesting complex | 4.49E-03 |
| 21 | GO:0005840: ribosome | 4.70E-03 |
| 22 | GO:0042651: thylakoid membrane | 5.55E-03 |
| 23 | GO:0015935: small ribosomal subunit | 5.93E-03 |
| 24 | GO:0009522: photosystem I | 8.79E-03 |
| 25 | GO:0009523: photosystem II | 9.23E-03 |
| 26 | GO:0010319: stromule | 1.16E-02 |
| 27 | GO:0016020: membrane | 1.16E-02 |
| 28 | GO:0030529: intracellular ribonucleoprotein complex | 1.25E-02 |
| 29 | GO:0009707: chloroplast outer membrane | 1.51E-02 |
| 30 | GO:0015934: large ribosomal subunit | 1.68E-02 |
| 31 | GO:0005623: cell | 4.07E-02 |