GO Enrichment Analysis of Co-expressed Genes with
AT1G35780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006849: plasma membrane pyruvate transport | 0.00E+00 |
| 2 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 3 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 4 | GO:0006353: DNA-templated transcription, termination | 2.31E-05 |
| 5 | GO:0010206: photosystem II repair | 3.71E-05 |
| 6 | GO:0000476: maturation of 4.5S rRNA | 5.64E-05 |
| 7 | GO:0000967: rRNA 5'-end processing | 5.64E-05 |
| 8 | GO:0043686: co-translational protein modification | 5.64E-05 |
| 9 | GO:0043007: maintenance of rDNA | 5.64E-05 |
| 10 | GO:0000023: maltose metabolic process | 5.64E-05 |
| 11 | GO:0005980: glycogen catabolic process | 5.64E-05 |
| 12 | GO:0030198: extracellular matrix organization | 5.64E-05 |
| 13 | GO:0007093: mitotic cell cycle checkpoint | 5.64E-05 |
| 14 | GO:0005983: starch catabolic process | 7.64E-05 |
| 15 | GO:0009629: response to gravity | 1.37E-04 |
| 16 | GO:0007154: cell communication | 1.37E-04 |
| 17 | GO:0071497: cellular response to freezing | 1.37E-04 |
| 18 | GO:0009662: etioplast organization | 1.37E-04 |
| 19 | GO:0090342: regulation of cell aging | 1.37E-04 |
| 20 | GO:0042325: regulation of phosphorylation | 1.37E-04 |
| 21 | GO:0051304: chromosome separation | 1.37E-04 |
| 22 | GO:0071452: cellular response to singlet oxygen | 1.37E-04 |
| 23 | GO:0034470: ncRNA processing | 1.37E-04 |
| 24 | GO:0016050: vesicle organization | 2.34E-04 |
| 25 | GO:0010601: positive regulation of auxin biosynthetic process | 3.41E-04 |
| 26 | GO:0019252: starch biosynthetic process | 3.49E-04 |
| 27 | GO:0006808: regulation of nitrogen utilization | 4.56E-04 |
| 28 | GO:1901141: regulation of lignin biosynthetic process | 4.56E-04 |
| 29 | GO:0031365: N-terminal protein amino acid modification | 5.78E-04 |
| 30 | GO:0042793: transcription from plastid promoter | 7.07E-04 |
| 31 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 7.07E-04 |
| 32 | GO:0010310: regulation of hydrogen peroxide metabolic process | 8.44E-04 |
| 33 | GO:2000033: regulation of seed dormancy process | 8.44E-04 |
| 34 | GO:0048437: floral organ development | 9.85E-04 |
| 35 | GO:0048564: photosystem I assembly | 1.13E-03 |
| 36 | GO:0005978: glycogen biosynthetic process | 1.13E-03 |
| 37 | GO:0009642: response to light intensity | 1.13E-03 |
| 38 | GO:0042255: ribosome assembly | 1.13E-03 |
| 39 | GO:0010205: photoinhibition | 1.62E-03 |
| 40 | GO:1900865: chloroplast RNA modification | 1.62E-03 |
| 41 | GO:0010629: negative regulation of gene expression | 1.79E-03 |
| 42 | GO:0015031: protein transport | 2.09E-03 |
| 43 | GO:0006820: anion transport | 2.16E-03 |
| 44 | GO:0010102: lateral root morphogenesis | 2.36E-03 |
| 45 | GO:0009266: response to temperature stimulus | 2.56E-03 |
| 46 | GO:0080188: RNA-directed DNA methylation | 2.76E-03 |
| 47 | GO:0006633: fatty acid biosynthetic process | 3.23E-03 |
| 48 | GO:0006418: tRNA aminoacylation for protein translation | 3.40E-03 |
| 49 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.10E-03 |
| 50 | GO:0008380: RNA splicing | 4.23E-03 |
| 51 | GO:0048544: recognition of pollen | 5.35E-03 |
| 52 | GO:0006814: sodium ion transport | 5.35E-03 |
| 53 | GO:0009658: chloroplast organization | 5.47E-03 |
| 54 | GO:0009556: microsporogenesis | 5.61E-03 |
| 55 | GO:0071554: cell wall organization or biogenesis | 5.88E-03 |
| 56 | GO:0030163: protein catabolic process | 6.43E-03 |
| 57 | GO:0009828: plant-type cell wall loosening | 6.71E-03 |
| 58 | GO:0010027: thylakoid membrane organization | 7.59E-03 |
| 59 | GO:0006906: vesicle fusion | 8.19E-03 |
| 60 | GO:0009631: cold acclimation | 1.01E-02 |
| 61 | GO:0006887: exocytosis | 1.22E-02 |
| 62 | GO:0006897: endocytosis | 1.22E-02 |
| 63 | GO:0009734: auxin-activated signaling pathway | 1.41E-02 |
| 64 | GO:0009664: plant-type cell wall organization | 1.51E-02 |
| 65 | GO:0006857: oligopeptide transport | 1.67E-02 |
| 66 | GO:0035556: intracellular signal transduction | 1.88E-02 |
| 67 | GO:0009620: response to fungus | 1.92E-02 |
| 68 | GO:0042545: cell wall modification | 2.00E-02 |
| 69 | GO:0009553: embryo sac development | 2.00E-02 |
| 70 | GO:0009624: response to nematode | 2.04E-02 |
| 71 | GO:0006396: RNA processing | 2.09E-02 |
| 72 | GO:0009742: brassinosteroid mediated signaling pathway | 2.13E-02 |
| 73 | GO:0006413: translational initiation | 2.87E-02 |
| 74 | GO:0045490: pectin catabolic process | 3.02E-02 |
| 75 | GO:0006508: proteolysis | 3.07E-02 |
| 76 | GO:0010468: regulation of gene expression | 3.42E-02 |
| 77 | GO:0009826: unidimensional cell growth | 4.01E-02 |
| 78 | GO:0009733: response to auxin | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097100: supercoiled DNA binding | 0.00E+00 |
| 2 | GO:0005201: extracellular matrix structural constituent | 0.00E+00 |
| 3 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 5 | GO:0051060: pullulanase activity | 0.00E+00 |
| 6 | GO:0004645: phosphorylase activity | 5.64E-05 |
| 7 | GO:0009374: biotin binding | 5.64E-05 |
| 8 | GO:0008184: glycogen phosphorylase activity | 5.64E-05 |
| 9 | GO:0042586: peptide deformylase activity | 5.64E-05 |
| 10 | GO:0017150: tRNA dihydrouridine synthase activity | 2.34E-04 |
| 11 | GO:0050833: pyruvate transmembrane transporter activity | 2.34E-04 |
| 12 | GO:0008508: bile acid:sodium symporter activity | 3.41E-04 |
| 13 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 4.56E-04 |
| 14 | GO:0008237: metallopeptidase activity | 4.79E-04 |
| 15 | GO:0003989: acetyl-CoA carboxylase activity | 5.78E-04 |
| 16 | GO:0004556: alpha-amylase activity | 7.07E-04 |
| 17 | GO:0004629: phospholipase C activity | 7.07E-04 |
| 18 | GO:0004222: metalloendopeptidase activity | 7.61E-04 |
| 19 | GO:0004435: phosphatidylinositol phospholipase C activity | 8.44E-04 |
| 20 | GO:0004525: ribonuclease III activity | 1.13E-03 |
| 21 | GO:0071949: FAD binding | 1.45E-03 |
| 22 | GO:0008327: methyl-CpG binding | 1.97E-03 |
| 23 | GO:0019888: protein phosphatase regulator activity | 2.36E-03 |
| 24 | GO:0004176: ATP-dependent peptidase activity | 3.63E-03 |
| 25 | GO:0003727: single-stranded RNA binding | 4.34E-03 |
| 26 | GO:0004812: aminoacyl-tRNA ligase activity | 4.58E-03 |
| 27 | GO:0016413: O-acetyltransferase activity | 7.29E-03 |
| 28 | GO:0008236: serine-type peptidase activity | 8.81E-03 |
| 29 | GO:0003993: acid phosphatase activity | 1.11E-02 |
| 30 | GO:0000149: SNARE binding | 1.15E-02 |
| 31 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.15E-02 |
| 32 | GO:0042393: histone binding | 1.18E-02 |
| 33 | GO:0005484: SNAP receptor activity | 1.29E-02 |
| 34 | GO:0003690: double-stranded DNA binding | 1.63E-02 |
| 35 | GO:0004674: protein serine/threonine kinase activity | 1.63E-02 |
| 36 | GO:0045330: aspartyl esterase activity | 1.71E-02 |
| 37 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.83E-02 |
| 38 | GO:0030599: pectinesterase activity | 1.96E-02 |
| 39 | GO:0004386: helicase activity | 2.18E-02 |
| 40 | GO:0019843: rRNA binding | 2.40E-02 |
| 41 | GO:0030170: pyridoxal phosphate binding | 2.58E-02 |
| 42 | GO:0004252: serine-type endopeptidase activity | 2.58E-02 |
| 43 | GO:0005524: ATP binding | 2.60E-02 |
| 44 | GO:0003743: translation initiation factor activity | 3.37E-02 |
| 45 | GO:0042802: identical protein binding | 3.58E-02 |
| 46 | GO:0044212: transcription regulatory region DNA binding | 3.61E-02 |
| 47 | GO:0005215: transporter activity | 3.98E-02 |
| 48 | GO:0008168: methyltransferase activity | 4.01E-02 |
| 49 | GO:0050660: flavin adenine dinucleotide binding | 4.57E-02 |
| 50 | GO:0008233: peptidase activity | 4.74E-02 |
| 51 | GO:0004497: monooxygenase activity | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010170: glucose-1-phosphate adenylyltransferase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 7.46E-12 |
| 3 | GO:0009706: chloroplast inner membrane | 9.99E-06 |
| 4 | GO:0009570: chloroplast stroma | 2.30E-05 |
| 5 | GO:0042644: chloroplast nucleoid | 3.71E-05 |
| 6 | GO:0009941: chloroplast envelope | 4.85E-05 |
| 7 | GO:0009534: chloroplast thylakoid | 9.47E-05 |
| 8 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.37E-04 |
| 9 | GO:0009317: acetyl-CoA carboxylase complex | 2.34E-04 |
| 10 | GO:0042646: plastid nucleoid | 3.41E-04 |
| 11 | GO:0009295: nucleoid | 4.79E-04 |
| 12 | GO:0005655: nucleolar ribonuclease P complex | 8.44E-04 |
| 13 | GO:0009535: chloroplast thylakoid membrane | 1.13E-03 |
| 14 | GO:0031901: early endosome membrane | 1.45E-03 |
| 15 | GO:0000159: protein phosphatase type 2A complex | 1.97E-03 |
| 16 | GO:0009508: plastid chromosome | 2.36E-03 |
| 17 | GO:0031977: thylakoid lumen | 1.22E-02 |
| 18 | GO:0031201: SNARE complex | 1.22E-02 |
| 19 | GO:0016020: membrane | 2.12E-02 |
| 20 | GO:0009579: thylakoid | 2.13E-02 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 2.40E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 3.69E-02 |
| 23 | GO:0009536: plastid | 4.41E-02 |
| 24 | GO:0009505: plant-type cell wall | 4.51E-02 |
| 25 | GO:0031969: chloroplast membrane | 4.80E-02 |