Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G34065

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046486: glycerolipid metabolic process0.00E+00
2GO:0006907: pinocytosis0.00E+00
3GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway0.00E+00
4GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic5.64E-05
5GO:0006650: glycerophospholipid metabolic process1.37E-04
6GO:0042780: tRNA 3'-end processing2.34E-04
7GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic2.34E-04
8GO:0045910: negative regulation of DNA recombination2.34E-04
9GO:0046168: glycerol-3-phosphate catabolic process2.34E-04
10GO:0045017: glycerolipid biosynthetic process3.41E-04
11GO:0051513: regulation of monopolar cell growth3.41E-04
12GO:0007276: gamete generation3.41E-04
13GO:0006072: glycerol-3-phosphate metabolic process3.41E-04
14GO:0006021: inositol biosynthetic process4.56E-04
15GO:0016123: xanthophyll biosynthetic process5.78E-04
16GO:0016120: carotene biosynthetic process5.78E-04
17GO:0015995: chlorophyll biosynthetic process6.28E-04
18GO:0060918: auxin transport7.07E-04
19GO:0042793: transcription from plastid promoter7.07E-04
20GO:0016554: cytidine to uridine editing7.07E-04
21GO:0009942: longitudinal axis specification8.44E-04
22GO:0030001: metal ion transport9.82E-04
23GO:0006401: RNA catabolic process9.85E-04
24GO:0009610: response to symbiotic fungus9.85E-04
25GO:0006402: mRNA catabolic process1.13E-03
26GO:0010492: maintenance of shoot apical meristem identity1.13E-03
27GO:0000105: histidine biosynthetic process1.13E-03
28GO:0051276: chromosome organization1.13E-03
29GO:0032544: plastid translation1.29E-03
30GO:0046916: cellular transition metal ion homeostasis1.45E-03
31GO:0006364: rRNA processing1.47E-03
32GO:1900865: chloroplast RNA modification1.62E-03
33GO:0031425: chloroplast RNA processing1.62E-03
34GO:0006298: mismatch repair1.79E-03
35GO:0006782: protoporphyrinogen IX biosynthetic process1.79E-03
36GO:0006790: sulfur compound metabolic process2.16E-03
37GO:0009887: animal organ morphogenesis2.56E-03
38GO:0046854: phosphatidylinositol phosphorylation2.76E-03
39GO:0016226: iron-sulfur cluster assembly3.86E-03
40GO:0071215: cellular response to abscisic acid stimulus4.10E-03
41GO:0042127: regulation of cell proliferation4.34E-03
42GO:0070417: cellular response to cold4.58E-03
43GO:0008033: tRNA processing4.83E-03
44GO:0009958: positive gravitropism5.09E-03
45GO:0007018: microtubule-based movement5.35E-03
46GO:0009658: chloroplast organization5.47E-03
47GO:0008654: phospholipid biosynthetic process5.61E-03
48GO:0006310: DNA recombination6.71E-03
49GO:0019760: glucosinolate metabolic process6.71E-03
50GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway7.01E-03
51GO:0000910: cytokinesis7.29E-03
52GO:0016126: sterol biosynthetic process7.59E-03
53GO:0006974: cellular response to DNA damage stimulus8.19E-03
54GO:0009627: systemic acquired resistance8.19E-03
55GO:0000724: double-strand break repair via homologous recombination1.04E-02
56GO:0051707: response to other organism1.29E-02
57GO:0006260: DNA replication1.48E-02
58GO:0009793: embryo development ending in seed dormancy2.16E-02
59GO:0016036: cellular response to phosphate starvation2.87E-02
60GO:0009451: RNA modification3.07E-02
61GO:0010200: response to chitin4.91E-02
RankGO TermAdjusted P value
1GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
2GO:0052834: inositol monophosphate phosphatase activity0.00E+00
3GO:0004401: histidinol-phosphatase activity0.00E+00
4GO:0004654: polyribonucleotide nucleotidyltransferase activity5.64E-05
5GO:0010347: L-galactose-1-phosphate phosphatase activity5.64E-05
6GO:0004047: aminomethyltransferase activity1.37E-04
7GO:0052832: inositol monophosphate 3-phosphatase activity1.37E-04
8GO:0004109: coproporphyrinogen oxidase activity1.37E-04
9GO:0008934: inositol monophosphate 1-phosphatase activity1.37E-04
10GO:0052833: inositol monophosphate 4-phosphatase activity1.37E-04
11GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity2.34E-04
12GO:0042781: 3'-tRNA processing endoribonuclease activity2.34E-04
13GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.78E-04
14GO:0009378: four-way junction helicase activity7.07E-04
15GO:0030983: mismatched DNA binding7.07E-04
16GO:0043140: ATP-dependent 3'-5' DNA helicase activity7.07E-04
17GO:0043138: 3'-5' DNA helicase activity8.44E-04
18GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity8.44E-04
19GO:0046914: transition metal ion binding1.29E-03
20GO:0004519: endonuclease activity1.65E-03
21GO:0003779: actin binding2.01E-03
22GO:0000175: 3'-5'-exoribonuclease activity2.36E-03
23GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.56E-03
24GO:0016887: ATPase activity2.57E-03
25GO:0003723: RNA binding2.93E-03
26GO:0004176: ATP-dependent peptidase activity3.63E-03
27GO:0003684: damaged DNA binding6.71E-03
28GO:0008237: metallopeptidase activity7.00E-03
29GO:0003824: catalytic activity8.39E-03
30GO:0005096: GTPase activator activity9.45E-03
31GO:0004222: metalloendopeptidase activity9.78E-03
32GO:0003697: single-stranded DNA binding1.08E-02
33GO:0003676: nucleic acid binding1.24E-02
34GO:0051287: NAD binding1.48E-02
35GO:0003777: microtubule motor activity1.71E-02
36GO:0008026: ATP-dependent helicase activity2.13E-02
37GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.35E-02
38GO:0019843: rRNA binding2.40E-02
RankGO TermAdjusted P value
1GO:0009508: plastid chromosome8.84E-05
2GO:0009331: glycerol-3-phosphate dehydrogenase complex3.41E-04
3GO:0009507: chloroplast4.09E-04
4GO:0009295: nucleoid4.79E-04
5GO:0005871: kinesin complex4.58E-03
6GO:0005694: chromosome6.15E-03
7GO:0009506: plasmodesma8.22E-03
8GO:0009707: chloroplast outer membrane9.13E-03
9GO:0009570: chloroplast stroma2.49E-02
10GO:0031225: anchored component of membrane2.78E-02
11GO:0046658: anchored component of plasma membrane3.69E-02
12GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.40E-02
13GO:0009536: plastid4.41E-02
14GO:0031969: chloroplast membrane4.80E-02
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Gene type



Gene DE type