co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G34010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044154: histone H3-K14 acetylation	0.00E+00
2	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
3	GO:0009583: detection of light stimulus	0.00E+00
4	GO:0071000: response to magnetism	0.00E+00
5	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
6	GO:0000372: Group I intron splicing	0.00E+00
7	GO:0043972: histone H3-K23 acetylation	0.00E+00
8	GO:0006114: glycerol biosynthetic process	0.00E+00
9	GO:0033528: S-methylmethionine cycle	0.00E+00
10	GO:1905177: tracheary element differentiation	0.00E+00
11	GO:0043087: regulation of GTPase activity	0.00E+00
12	GO:0070979: protein K11-linked ubiquitination	0.00E+00
13	GO:1901332: negative regulation of lateral root development	4.39E-05
14	GO:0051322: anaphase	7.81E-05
15	GO:0010158: abaxial cell fate specification	1.22E-04
16	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.76E-04
17	GO:0051510: regulation of unidimensional cell growth	3.09E-04
18	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	3.55E-04
19	GO:0009090: homoserine biosynthetic process	3.55E-04
20	GO:0043971: histone H3-K18 acetylation	3.55E-04
21	GO:0048657: anther wall tapetum cell differentiation	3.55E-04
22	GO:0000012: single strand break repair	3.55E-04
23	GO:1902025: nitrate import	3.55E-04
24	GO:0043266: regulation of potassium ion transport	3.55E-04
25	GO:0010080: regulation of floral meristem growth	3.55E-04
26	GO:0042547: cell wall modification involved in multidimensional cell growth	3.55E-04
27	GO:0015798: myo-inositol transport	3.55E-04
28	GO:0072387: flavin adenine dinucleotide metabolic process	3.55E-04
29	GO:2000021: regulation of ion homeostasis	3.55E-04
30	GO:0006436: tryptophanyl-tRNA aminoacylation	3.55E-04
31	GO:0090548: response to nitrate starvation	3.55E-04
32	GO:0000066: mitochondrial ornithine transport	3.55E-04
33	GO:0009657: plastid organization	4.76E-04
34	GO:0000373: Group II intron splicing	5.70E-04
35	GO:0009086: methionine biosynthetic process	6.73E-04
36	GO:1901529: positive regulation of anion channel activity	7.72E-04
37	GO:0048255: mRNA stabilization	7.72E-04
38	GO:0010617: circadian regulation of calcium ion oscillation	7.72E-04
39	GO:0006435: threonyl-tRNA aminoacylation	7.72E-04
40	GO:0099402: plant organ development	7.72E-04
41	GO:0010343: singlet oxygen-mediated programmed cell death	7.72E-04
42	GO:0009793: embryo development ending in seed dormancy	8.78E-04
43	GO:0010582: floral meristem determinacy	1.03E-03
44	GO:0006094: gluconeogenesis	1.17E-03
45	GO:1902448: positive regulation of shade avoidance	1.25E-03
46	GO:0010022: meristem determinacy	1.25E-03
47	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.25E-03
48	GO:1901672: positive regulation of systemic acquired resistance	1.25E-03
49	GO:0010623: programmed cell death involved in cell development	1.25E-03
50	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	1.25E-03
51	GO:0006696: ergosterol biosynthetic process	1.25E-03
52	GO:0001578: microtubule bundle formation	1.25E-03
53	GO:0010207: photosystem II assembly	1.31E-03
54	GO:0090351: seedling development	1.47E-03
55	GO:0051639: actin filament network formation	1.80E-03
56	GO:0034059: response to anoxia	1.80E-03
57	GO:0009800: cinnamic acid biosynthetic process	1.80E-03
58	GO:0010306: rhamnogalacturonan II biosynthetic process	1.80E-03
59	GO:0042989: sequestering of actin monomers	1.80E-03
60	GO:0009067: aspartate family amino acid biosynthetic process	1.80E-03
61	GO:0030071: regulation of mitotic metaphase/anaphase transition	1.80E-03
62	GO:0015846: polyamine transport	2.42E-03
63	GO:0010508: positive regulation of autophagy	2.42E-03
64	GO:0007020: microtubule nucleation	2.42E-03
65	GO:1902347: response to strigolactone	2.42E-03
66	GO:0051781: positive regulation of cell division	2.42E-03
67	GO:0051764: actin crosslink formation	2.42E-03
68	GO:0010584: pollen exine formation	2.86E-03
69	GO:0032876: negative regulation of DNA endoreduplication	3.09E-03
70	GO:0006465: signal peptide processing	3.09E-03
71	GO:0080110: sporopollenin biosynthetic process	3.09E-03
72	GO:0046785: microtubule polymerization	3.09E-03
73	GO:0030041: actin filament polymerization	3.09E-03
74	GO:0010117: photoprotection	3.09E-03
75	GO:0046283: anthocyanin-containing compound metabolic process	3.09E-03
76	GO:0010236: plastoquinone biosynthetic process	3.09E-03
77	GO:0045038: protein import into chloroplast thylakoid membrane	3.09E-03
78	GO:1902183: regulation of shoot apical meristem development	3.09E-03
79	GO:0016117: carotenoid biosynthetic process	3.09E-03
80	GO:0010268: brassinosteroid homeostasis	3.61E-03
81	GO:0060918: auxin transport	3.82E-03
82	GO:1901371: regulation of leaf morphogenesis	3.82E-03
83	GO:0006559: L-phenylalanine catabolic process	3.82E-03
84	GO:0007059: chromosome segregation	3.88E-03
85	GO:0016132: brassinosteroid biosynthetic process	4.45E-03
86	GO:0042372: phylloquinone biosynthetic process	4.60E-03
87	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	4.60E-03
88	GO:0009088: threonine biosynthetic process	4.60E-03
89	GO:0010310: regulation of hydrogen peroxide metabolic process	4.60E-03
90	GO:0007264: small GTPase mediated signal transduction	4.75E-03
91	GO:0016125: sterol metabolic process	5.40E-03
92	GO:0010050: vegetative phase change	5.44E-03
93	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	5.44E-03
94	GO:0006955: immune response	5.44E-03
95	GO:0048528: post-embryonic root development	5.44E-03
96	GO:0000910: cytokinesis	6.08E-03
97	GO:0048564: photosystem I assembly	6.32E-03
98	GO:0009850: auxin metabolic process	6.32E-03
99	GO:0042255: ribosome assembly	6.32E-03
100	GO:0006353: DNA-templated transcription, termination	6.32E-03
101	GO:0009704: de-etiolation	6.32E-03
102	GO:0032875: regulation of DNA endoreduplication	6.32E-03
103	GO:0045010: actin nucleation	6.32E-03
104	GO:0000105: histidine biosynthetic process	6.32E-03
105	GO:0022900: electron transport chain	7.25E-03
106	GO:0032544: plastid translation	7.25E-03
107	GO:0044030: regulation of DNA methylation	7.25E-03
108	GO:0006098: pentose-phosphate shunt	8.22E-03
109	GO:0090305: nucleic acid phosphodiester bond hydrolysis	8.22E-03
110	GO:0010206: photosystem II repair	8.22E-03
111	GO:2000024: regulation of leaf development	8.22E-03
112	GO:0018298: protein-chromophore linkage	8.42E-03
113	GO:0009638: phototropism	9.24E-03
114	GO:1900426: positive regulation of defense response to bacterium	9.24E-03
115	GO:0006535: cysteine biosynthetic process from serine	1.03E-02
116	GO:0006259: DNA metabolic process	1.03E-02
117	GO:0009451: RNA modification	1.05E-02
118	GO:0006265: DNA topological change	1.14E-02
119	GO:0009089: lysine biosynthetic process via diaminopimelate	1.14E-02
120	GO:0006415: translational termination	1.14E-02
121	GO:0009750: response to fructose	1.14E-02
122	GO:0006839: mitochondrial transport	1.22E-02
123	GO:0045037: protein import into chloroplast stroma	1.26E-02
124	GO:0008283: cell proliferation	1.38E-02
125	GO:0009785: blue light signaling pathway	1.38E-02
126	GO:0030036: actin cytoskeleton organization	1.38E-02
127	GO:0010075: regulation of meristem growth	1.38E-02
128	GO:0009767: photosynthetic electron transport chain	1.38E-02
129	GO:0042546: cell wall biogenesis	1.44E-02
130	GO:0010020: chloroplast fission	1.50E-02
131	GO:0006302: double-strand break repair	1.50E-02
132	GO:0080188: RNA-directed DNA methylation	1.62E-02
133	GO:0009658: chloroplast organization	1.78E-02
134	GO:0009944: polarity specification of adaxial/abaxial axis	1.89E-02
135	GO:0030150: protein import into mitochondrial matrix	1.89E-02
136	GO:0007010: cytoskeleton organization	1.89E-02
137	GO:0051017: actin filament bundle assembly	1.89E-02
138	GO:0006289: nucleotide-excision repair	1.89E-02
139	GO:2000377: regulation of reactive oxygen species metabolic process	1.89E-02
140	GO:0019344: cysteine biosynthetic process	1.89E-02
141	GO:0006418: tRNA aminoacylation for protein translation	2.03E-02
142	GO:0043622: cortical microtubule organization	2.03E-02
143	GO:0010073: meristem maintenance	2.03E-02
144	GO:0006825: copper ion transport	2.03E-02
145	GO:0006417: regulation of translation	2.07E-02
146	GO:0016998: cell wall macromolecule catabolic process	2.17E-02
147	GO:0015992: proton transport	2.17E-02
148	GO:0048511: rhythmic process	2.17E-02
149	GO:0048316: seed development	2.28E-02
150	GO:0009814: defense response, incompatible interaction	2.31E-02
151	GO:0035428: hexose transmembrane transport	2.31E-02
152	GO:0006730: one-carbon metabolic process	2.31E-02
153	GO:0031348: negative regulation of defense response	2.31E-02
154	GO:0080092: regulation of pollen tube growth	2.31E-02
155	GO:0080167: response to karrikin	2.33E-02
156	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.43E-02
157	GO:0019722: calcium-mediated signaling	2.61E-02
158	GO:0010089: xylem development	2.61E-02
159	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.77E-02
160	GO:0008033: tRNA processing	2.92E-02
161	GO:0010087: phloem or xylem histogenesis	2.92E-02
162	GO:0010118: stomatal movement	2.92E-02
163	GO:0006508: proteolysis	3.01E-02
164	GO:0045489: pectin biosynthetic process	3.08E-02
165	GO:0010154: fruit development	3.08E-02
166	GO:0010197: polar nucleus fusion	3.08E-02
167	GO:0048868: pollen tube development	3.08E-02
168	GO:0046323: glucose import	3.08E-02
169	GO:0042752: regulation of circadian rhythm	3.25E-02
170	GO:0009646: response to absence of light	3.25E-02
171	GO:0009749: response to glucose	3.41E-02
172	GO:0032259: methylation	3.59E-02
173	GO:0010583: response to cyclopentenone	3.75E-02
174	GO:0016032: viral process	3.75E-02
175	GO:0032502: developmental process	3.75E-02
176	GO:0042744: hydrogen peroxide catabolic process	3.79E-02
177	GO:0010090: trichome morphogenesis	3.93E-02
178	GO:0007267: cell-cell signaling	4.29E-02
179	GO:0045490: pectin catabolic process	4.58E-02
180	GO:0016126: sterol biosynthetic process	4.65E-02
181	GO:0001666: response to hypoxia	4.65E-02
182	GO:0009911: positive regulation of flower development	4.65E-02
183	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
2	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
3	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
4	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
5	GO:0019808: polyamine binding	0.00E+00
6	GO:0050613: delta14-sterol reductase activity	0.00E+00
7	GO:0046905: phytoene synthase activity	0.00E+00
8	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
9	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
10	GO:0005048: signal sequence binding	0.00E+00
11	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
12	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
13	GO:0042834: peptidoglycan binding	3.55E-04
14	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	3.55E-04
15	GO:0005290: L-histidine transmembrane transporter activity	3.55E-04
16	GO:0004008: copper-exporting ATPase activity	3.55E-04
17	GO:0051996: squalene synthase activity	3.55E-04
18	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	3.55E-04
19	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.55E-04
20	GO:0004830: tryptophan-tRNA ligase activity	3.55E-04
21	GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity	3.55E-04
22	GO:0003879: ATP phosphoribosyltransferase activity	3.55E-04
23	GO:0043022: ribosome binding	3.89E-04
24	GO:0000064: L-ornithine transmembrane transporter activity	7.72E-04
25	GO:0004412: homoserine dehydrogenase activity	7.72E-04
26	GO:0004829: threonine-tRNA ligase activity	7.72E-04
27	GO:0048531: beta-1,3-galactosyltransferase activity	7.72E-04
28	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	7.72E-04
29	GO:0005366: myo-inositol:proton symporter activity	7.72E-04
30	GO:0050017: L-3-cyanoalanine synthase activity	7.72E-04
31	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	7.72E-04
32	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	7.72E-04
33	GO:0005089: Rho guanyl-nucleotide exchange factor activity	9.04E-04
34	GO:0045548: phenylalanine ammonia-lyase activity	1.25E-03
35	GO:0003913: DNA photolyase activity	1.25E-03
36	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.25E-03
37	GO:0016805: dipeptidase activity	1.25E-03
38	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	1.25E-03
39	GO:0008430: selenium binding	1.25E-03
40	GO:0005096: GTPase activator activity	1.26E-03
41	GO:0004072: aspartate kinase activity	1.80E-03
42	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.80E-03
43	GO:0015181: arginine transmembrane transporter activity	1.80E-03
44	GO:0016149: translation release factor activity, codon specific	1.80E-03
45	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.80E-03
46	GO:0009882: blue light photoreceptor activity	1.80E-03
47	GO:0004300: enoyl-CoA hydratase activity	1.80E-03
48	GO:0015189: L-lysine transmembrane transporter activity	1.80E-03
49	GO:0070628: proteasome binding	2.42E-03
50	GO:0010385: double-stranded methylated DNA binding	2.42E-03
51	GO:0042277: peptide binding	2.42E-03
52	GO:0030570: pectate lyase activity	2.63E-03
53	GO:0003924: GTPase activity	2.70E-03
54	GO:0003785: actin monomer binding	3.09E-03
55	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.09E-03
56	GO:0004332: fructose-bisphosphate aldolase activity	3.82E-03
57	GO:0031593: polyubiquitin binding	3.82E-03
58	GO:0004656: procollagen-proline 4-dioxygenase activity	4.60E-03
59	GO:0004124: cysteine synthase activity	4.60E-03
60	GO:0004518: nuclease activity	4.75E-03
61	GO:0004427: inorganic diphosphatase activity	5.44E-03
62	GO:0009881: photoreceptor activity	5.44E-03
63	GO:0005525: GTP binding	5.65E-03
64	GO:0008312: 7S RNA binding	6.32E-03
65	GO:0005375: copper ion transmembrane transporter activity	7.25E-03
66	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	7.25E-03
67	GO:0071949: FAD binding	8.22E-03
68	GO:0003747: translation release factor activity	8.22E-03
69	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.32E-03
70	GO:0004161: dimethylallyltranstransferase activity	1.14E-02
71	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.20E-02
72	GO:0015266: protein channel activity	1.38E-02
73	GO:0008081: phosphoric diester hydrolase activity	1.38E-02
74	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.38E-02
75	GO:0035091: phosphatidylinositol binding	1.50E-02
76	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.50E-02
77	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.76E-02
78	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.76E-02
79	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.76E-02
80	GO:0043130: ubiquitin binding	1.89E-02
81	GO:0031418: L-ascorbic acid binding	1.89E-02
82	GO:0003690: double-stranded DNA binding	1.93E-02
83	GO:0051087: chaperone binding	2.03E-02
84	GO:0003723: RNA binding	2.31E-02
85	GO:0003727: single-stranded RNA binding	2.61E-02
86	GO:0004812: aminoacyl-tRNA ligase activity	2.77E-02
87	GO:0004402: histone acetyltransferase activity	2.92E-02
88	GO:0008536: Ran GTPase binding	3.08E-02
89	GO:0004527: exonuclease activity	3.08E-02
90	GO:0005355: glucose transmembrane transporter activity	3.25E-02
91	GO:0050662: coenzyme binding	3.25E-02
92	GO:0010181: FMN binding	3.25E-02
93	GO:0019901: protein kinase binding	3.41E-02
94	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.42E-02
95	GO:0048038: quinone binding	3.58E-02
96	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.58E-02
97	GO:0016829: lyase activity	3.60E-02
98	GO:0004252: serine-type endopeptidase activity	3.69E-02
99	GO:0000156: phosphorelay response regulator activity	3.93E-02
100	GO:0051015: actin filament binding	3.93E-02
101	GO:0015144: carbohydrate transmembrane transporter activity	3.98E-02
102	GO:0003684: damaged DNA binding	4.11E-02
103	GO:0004519: endonuclease activity	4.19E-02
104	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.29E-02
105	GO:0008237: metallopeptidase activity	4.29E-02
106	GO:0046872: metal ion binding	4.34E-02
107	GO:0016597: amino acid binding	4.47E-02
108	GO:0005351: sugar:proton symporter activity	4.48E-02
109	GO:0004672: protein kinase activity	4.68E-02
110	GO:0008017: microtubule binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0009507: chloroplast	3.61E-13
4	GO:0009574: preprophase band	2.40E-06
5	GO:0009570: chloroplast stroma	6.41E-05
6	GO:0009535: chloroplast thylakoid membrane	7.79E-05
7	GO:0016604: nuclear body	6.73E-04
8	GO:0080085: signal recognition particle, chloroplast targeting	7.72E-04
9	GO:0005938: cell cortex	1.17E-03
10	GO:0005578: proteinaceous extracellular matrix	1.17E-03
11	GO:0016605: PML body	1.25E-03
12	GO:0031225: anchored component of membrane	1.56E-03
13	GO:0032432: actin filament bundle	1.80E-03
14	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	2.42E-03
15	GO:0072686: mitotic spindle	3.09E-03
16	GO:0046658: anchored component of plasma membrane	3.26E-03
17	GO:0031209: SCAR complex	3.82E-03
18	GO:0010005: cortical microtubule, transverse to long axis	4.60E-03
19	GO:0031305: integral component of mitochondrial inner membrane	6.32E-03
20	GO:0030529: intracellular ribonucleoprotein complex	6.44E-03
21	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	7.25E-03
22	GO:0005680: anaphase-promoting complex	8.22E-03
23	GO:0009707: chloroplast outer membrane	8.42E-03
24	GO:0055028: cortical microtubule	1.03E-02
25	GO:0016324: apical plasma membrane	1.03E-02
26	GO:0005884: actin filament	1.14E-02
27	GO:0000311: plastid large ribosomal subunit	1.26E-02
28	GO:0009536: plastid	1.26E-02
29	GO:0009505: plant-type cell wall	1.31E-02
30	GO:0030176: integral component of endoplasmic reticulum membrane	1.62E-02
31	GO:0042651: thylakoid membrane	2.03E-02
32	GO:0009532: plastid stroma	2.17E-02
33	GO:0005874: microtubule	2.23E-02
34	GO:0015629: actin cytoskeleton	2.46E-02
35	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.61E-02
36	GO:0010287: plastoglobule	3.16E-02
37	GO:0009579: thylakoid	3.20E-02
38	GO:0009524: phragmoplast	3.51E-02
39	GO:0005759: mitochondrial matrix	4.17E-02
40	GO:0009295: nucleoid	4.29E-02
41	GO:0009705: plant-type vacuole membrane	4.58E-02