Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G33960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051553: flavone biosynthetic process0.00E+00
2GO:2000068: regulation of defense response to insect0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0010055: atrichoblast differentiation0.00E+00
5GO:0006654: phosphatidic acid biosynthetic process0.00E+00
6GO:1902001: fatty acid transmembrane transport0.00E+00
7GO:1902289: negative regulation of defense response to oomycetes0.00E+00
8GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
9GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
10GO:0052386: cell wall thickening0.00E+00
11GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress0.00E+00
12GO:1902009: positive regulation of toxin transport0.00E+00
13GO:0046865: terpenoid transport0.00E+00
14GO:0018063: cytochrome c-heme linkage0.00E+00
15GO:0009759: indole glucosinolate biosynthetic process5.06E-06
16GO:1900057: positive regulation of leaf senescence1.37E-05
17GO:0006605: protein targeting2.04E-05
18GO:0010112: regulation of systemic acquired resistance3.95E-05
19GO:0042742: defense response to bacterium4.75E-05
20GO:0009751: response to salicylic acid6.48E-05
21GO:0051707: response to other organism7.26E-05
22GO:0015031: protein transport1.18E-04
23GO:0051607: defense response to virus1.46E-04
24GO:0009620: response to fungus2.34E-04
25GO:1990542: mitochondrial transmembrane transport4.40E-04
26GO:0032107: regulation of response to nutrient levels4.40E-04
27GO:1990641: response to iron ion starvation4.40E-04
28GO:0019567: arabinose biosynthetic process4.40E-04
29GO:0033306: phytol metabolic process4.40E-04
30GO:0046246: terpene biosynthetic process4.40E-04
31GO:0051090: regulation of sequence-specific DNA binding transcription factor activity4.40E-04
32GO:0050691: regulation of defense response to virus by host4.40E-04
33GO:0006680: glucosylceramide catabolic process4.40E-04
34GO:0010230: alternative respiration4.40E-04
35GO:0034214: protein hexamerization4.40E-04
36GO:0019478: D-amino acid catabolic process4.40E-04
37GO:0006102: isocitrate metabolic process5.32E-04
38GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.32E-04
39GO:0009636: response to toxic substance6.69E-04
40GO:0010193: response to ozone8.00E-04
41GO:0006886: intracellular protein transport9.05E-04
42GO:0071668: plant-type cell wall assembly9.50E-04
43GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.50E-04
44GO:0006568: tryptophan metabolic process9.50E-04
45GO:0055088: lipid homeostasis9.50E-04
46GO:0006101: citrate metabolic process9.50E-04
47GO:0015908: fatty acid transport9.50E-04
48GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine9.50E-04
49GO:0019725: cellular homeostasis9.50E-04
50GO:0051252: regulation of RNA metabolic process9.50E-04
51GO:0009816: defense response to bacterium, incompatible interaction1.36E-03
52GO:0009627: systemic acquired resistance1.46E-03
53GO:0071398: cellular response to fatty acid1.55E-03
54GO:0072661: protein targeting to plasma membrane1.55E-03
55GO:0010186: positive regulation of cellular defense response1.55E-03
56GO:0032504: multicellular organism reproduction1.55E-03
57GO:0010476: gibberellin mediated signaling pathway1.55E-03
58GO:0010325: raffinose family oligosaccharide biosynthetic process1.55E-03
59GO:0009410: response to xenobiotic stimulus1.55E-03
60GO:0010272: response to silver ion1.55E-03
61GO:0015692: lead ion transport1.55E-03
62GO:0080168: abscisic acid transport1.55E-03
63GO:0061158: 3'-UTR-mediated mRNA destabilization1.55E-03
64GO:0002230: positive regulation of defense response to virus by host1.55E-03
65GO:0080163: regulation of protein serine/threonine phosphatase activity1.55E-03
66GO:0002237: response to molecule of bacterial origin1.80E-03
67GO:0055070: copper ion homeostasis2.24E-03
68GO:0001676: long-chain fatty acid metabolic process2.24E-03
69GO:0010116: positive regulation of abscisic acid biosynthetic process2.24E-03
70GO:0070301: cellular response to hydrogen peroxide2.24E-03
71GO:0002239: response to oomycetes2.24E-03
72GO:0071323: cellular response to chitin2.24E-03
73GO:0009963: positive regulation of flavonoid biosynthetic process2.24E-03
74GO:1902290: positive regulation of defense response to oomycetes2.24E-03
75GO:0080024: indolebutyric acid metabolic process2.24E-03
76GO:0000162: tryptophan biosynthetic process2.25E-03
77GO:0006099: tricarboxylic acid cycle2.55E-03
78GO:0010200: response to chitin2.55E-03
79GO:0016192: vesicle-mediated transport2.62E-03
80GO:0006631: fatty acid metabolic process3.00E-03
81GO:0060548: negative regulation of cell death3.01E-03
82GO:0009939: positive regulation of gibberellic acid mediated signaling pathway3.01E-03
83GO:0048830: adventitious root development3.01E-03
84GO:1902584: positive regulation of response to water deprivation3.01E-03
85GO:1901002: positive regulation of response to salt stress3.01E-03
86GO:0006621: protein retention in ER lumen3.01E-03
87GO:0033356: UDP-L-arabinose metabolic process3.01E-03
88GO:0010188: response to microbial phytotoxin3.01E-03
89GO:0015867: ATP transport3.01E-03
90GO:0016998: cell wall macromolecule catabolic process3.03E-03
91GO:0009269: response to desiccation3.03E-03
92GO:0031348: negative regulation of defense response3.31E-03
93GO:0071456: cellular response to hypoxia3.31E-03
94GO:0010150: leaf senescence3.48E-03
95GO:0006012: galactose metabolic process3.61E-03
96GO:0006097: glyoxylate cycle3.85E-03
97GO:0009229: thiamine diphosphate biosynthetic process3.85E-03
98GO:0045927: positive regulation of growth3.85E-03
99GO:0006564: L-serine biosynthetic process3.85E-03
100GO:0009611: response to wounding4.19E-03
101GO:0007166: cell surface receptor signaling pathway4.27E-03
102GO:0009617: response to bacterium4.56E-03
103GO:0015866: ADP transport4.77E-03
104GO:0010256: endomembrane system organization4.77E-03
105GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.77E-03
106GO:1900425: negative regulation of defense response to bacterium4.77E-03
107GO:0033365: protein localization to organelle4.77E-03
108GO:0009228: thiamine biosynthetic process4.77E-03
109GO:0046686: response to cadmium ion5.50E-03
110GO:0008152: metabolic process5.65E-03
111GO:0006979: response to oxidative stress5.72E-03
112GO:0006623: protein targeting to vacuole5.73E-03
113GO:0048444: floral organ morphogenesis5.75E-03
114GO:0030643: cellular phosphate ion homeostasis5.75E-03
115GO:0034389: lipid particle organization5.75E-03
116GO:0002229: defense response to oomycetes6.14E-03
117GO:0006891: intra-Golgi vesicle-mediated transport6.14E-03
118GO:1902074: response to salt6.80E-03
119GO:0010044: response to aluminum ion6.80E-03
120GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.80E-03
121GO:1900056: negative regulation of leaf senescence6.80E-03
122GO:0080186: developmental vegetative growth6.80E-03
123GO:0006614: SRP-dependent cotranslational protein targeting to membrane6.80E-03
124GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.80E-03
125GO:0071669: plant-type cell wall organization or biogenesis6.80E-03
126GO:0050829: defense response to Gram-negative bacterium6.80E-03
127GO:0030091: protein repair7.91E-03
128GO:0009819: drought recovery7.91E-03
129GO:0009850: auxin metabolic process7.91E-03
130GO:0009615: response to virus8.90E-03
131GO:0030968: endoplasmic reticulum unfolded protein response9.09E-03
132GO:0017004: cytochrome complex assembly9.09E-03
133GO:0010208: pollen wall assembly9.09E-03
134GO:0010120: camalexin biosynthetic process9.09E-03
135GO:0010417: glucuronoxylan biosynthetic process9.09E-03
136GO:0006997: nucleus organization9.09E-03
137GO:0010204: defense response signaling pathway, resistance gene-independent9.09E-03
138GO:0006906: vesicle fusion9.96E-03
139GO:0009056: catabolic process1.03E-02
140GO:0015780: nucleotide-sugar transport1.03E-02
141GO:0009835: fruit ripening1.03E-02
142GO:0007338: single fertilization1.03E-02
143GO:0019432: triglyceride biosynthetic process1.03E-02
144GO:0016311: dephosphorylation1.11E-02
145GO:1900426: positive regulation of defense response to bacterium1.16E-02
146GO:0090332: stomatal closure1.16E-02
147GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.16E-02
148GO:0008202: steroid metabolic process1.16E-02
149GO:0009817: defense response to fungus, incompatible interaction1.17E-02
150GO:0009641: shade avoidance1.30E-02
151GO:0010629: negative regulation of gene expression1.30E-02
152GO:0009870: defense response signaling pathway, resistance gene-dependent1.30E-02
153GO:0006032: chitin catabolic process1.30E-02
154GO:0019538: protein metabolic process1.30E-02
155GO:0055114: oxidation-reduction process1.42E-02
156GO:0009684: indoleacetic acid biosynthetic process1.44E-02
157GO:0019684: photosynthesis, light reaction1.44E-02
158GO:0009682: induced systemic resistance1.44E-02
159GO:0052544: defense response by callose deposition in cell wall1.44E-02
160GO:0000272: polysaccharide catabolic process1.44E-02
161GO:0040008: regulation of growth1.45E-02
162GO:0009867: jasmonic acid mediated signaling pathway1.48E-02
163GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.58E-02
164GO:0071365: cellular response to auxin stimulus1.58E-02
165GO:0000266: mitochondrial fission1.58E-02
166GO:0045037: protein import into chloroplast stroma1.58E-02
167GO:2000012: regulation of auxin polar transport1.73E-02
168GO:0010102: lateral root morphogenesis1.73E-02
169GO:0006887: exocytosis1.76E-02
170GO:0042542: response to hydrogen peroxide1.84E-02
171GO:0009753: response to jasmonic acid1.88E-02
172GO:0090351: seedling development2.05E-02
173GO:0034976: response to endoplasmic reticulum stress2.21E-02
174GO:0006855: drug transmembrane transport2.23E-02
175GO:0006952: defense response2.23E-02
176GO:0031347: regulation of defense response2.32E-02
177GO:0007275: multicellular organism development2.35E-02
178GO:0080147: root hair cell development2.38E-02
179GO:0009863: salicylic acid mediated signaling pathway2.38E-02
180GO:0030150: protein import into mitochondrial matrix2.38E-02
181GO:0050832: defense response to fungus2.42E-02
182GO:0051302: regulation of cell division2.55E-02
183GO:0006874: cellular calcium ion homeostasis2.55E-02
184GO:0019915: lipid storage2.73E-02
185GO:0016114: terpenoid biosynthetic process2.73E-02
186GO:0009737: response to abscisic acid2.77E-02
187GO:0009814: defense response, incompatible interaction2.91E-02
188GO:0016226: iron-sulfur cluster assembly2.91E-02
189GO:0030433: ubiquitin-dependent ERAD pathway2.91E-02
190GO:0006970: response to osmotic stress2.93E-02
191GO:0009693: ethylene biosynthetic process3.10E-02
192GO:0042147: retrograde transport, endosome to Golgi3.48E-02
193GO:0010051: xylem and phloem pattern formation3.68E-02
194GO:0006520: cellular amino acid metabolic process3.88E-02
195GO:0045489: pectin biosynthetic process3.88E-02
196GO:0006662: glycerol ether metabolic process3.88E-02
197GO:0048544: recognition of pollen4.09E-02
198GO:0006635: fatty acid beta-oxidation4.51E-02
199GO:0071554: cell wall organization or biogenesis4.51E-02
200GO:0000302: response to reactive oxygen species4.51E-02
201GO:0016032: viral process4.73E-02
202GO:0045893: positive regulation of transcription, DNA-templated4.80E-02
RankGO TermAdjusted P value
1GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
2GO:0034338: short-chain carboxylesterase activity0.00E+00
3GO:0033759: flavone synthase activity0.00E+00
4GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity0.00E+00
5GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
6GO:0050334: thiaminase activity0.00E+00
7GO:0005046: KDEL sequence binding0.00E+00
8GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity0.00E+00
9GO:0008320: protein transmembrane transporter activity1.37E-05
10GO:0010178: IAA-amino acid conjugate hydrolase activity6.40E-05
11GO:0030247: polysaccharide binding2.14E-04
12GO:0102391: decanoate--CoA ligase activity3.30E-04
13GO:0004656: procollagen-proline 4-dioxygenase activity3.30E-04
14GO:0004467: long-chain fatty acid-CoA ligase activity4.25E-04
15GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity4.40E-04
16GO:0015245: fatty acid transporter activity4.40E-04
17GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity4.40E-04
18GO:0016229: steroid dehydrogenase activity4.40E-04
19GO:0010179: IAA-Ala conjugate hydrolase activity4.40E-04
20GO:2001227: quercitrin binding4.40E-04
21GO:0004425: indole-3-glycerol-phosphate synthase activity4.40E-04
22GO:0070401: NADP+ binding4.40E-04
23GO:0004348: glucosylceramidase activity4.40E-04
24GO:0030942: endoplasmic reticulum signal peptide binding4.40E-04
25GO:2001147: camalexin binding4.40E-04
26GO:0005509: calcium ion binding5.16E-04
27GO:0004630: phospholipase D activity6.48E-04
28GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.48E-04
29GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity9.50E-04
30GO:0010331: gibberellin binding9.50E-04
31GO:0004617: phosphoglycerate dehydrogenase activity9.50E-04
32GO:0003994: aconitate hydratase activity9.50E-04
33GO:0008428: ribonuclease inhibitor activity9.50E-04
34GO:0032934: sterol binding9.50E-04
35GO:0015036: disulfide oxidoreductase activity9.50E-04
36GO:0052691: UDP-arabinopyranose mutase activity9.50E-04
37GO:0050736: O-malonyltransferase activity9.50E-04
38GO:0008237: metallopeptidase activity1.10E-03
39GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.55E-03
40GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.55E-03
41GO:0004806: triglyceride lipase activity1.56E-03
42GO:0008061: chitin binding2.02E-03
43GO:0008106: alcohol dehydrogenase (NADP+) activity2.24E-03
44GO:0017077: oxidative phosphorylation uncoupler activity2.24E-03
45GO:0035529: NADH pyrophosphatase activity2.24E-03
46GO:0005460: UDP-glucose transmembrane transporter activity2.24E-03
47GO:0004449: isocitrate dehydrogenase (NAD+) activity2.24E-03
48GO:0016656: monodehydroascorbate reductase (NADH) activity2.24E-03
49GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.41E-03
50GO:0031418: L-ascorbic acid binding2.49E-03
51GO:0001046: core promoter sequence-specific DNA binding2.49E-03
52GO:0016866: intramolecular transferase activity3.01E-03
53GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.01E-03
54GO:0046923: ER retention sequence binding3.01E-03
55GO:0047631: ADP-ribose diphosphatase activity3.85E-03
56GO:0005459: UDP-galactose transmembrane transporter activity3.85E-03
57GO:0004623: phospholipase A2 activity3.85E-03
58GO:0008948: oxaloacetate decarboxylase activity3.85E-03
59GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.85E-03
60GO:0018685: alkane 1-monooxygenase activity3.85E-03
61GO:0005496: steroid binding3.85E-03
62GO:0000210: NAD+ diphosphatase activity4.77E-03
63GO:0003978: UDP-glucose 4-epimerase activity5.75E-03
64GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.75E-03
65GO:0015217: ADP transmembrane transporter activity5.75E-03
66GO:0033743: peptide-methionine (R)-S-oxide reductase activity5.75E-03
67GO:0004144: diacylglycerol O-acyltransferase activity5.75E-03
68GO:0005347: ATP transmembrane transporter activity5.75E-03
69GO:0102425: myricetin 3-O-glucosyltransferase activity6.80E-03
70GO:0102360: daphnetin 3-O-glucosyltransferase activity6.80E-03
71GO:0043295: glutathione binding6.80E-03
72GO:0004714: transmembrane receptor protein tyrosine kinase activity7.91E-03
73GO:0008312: 7S RNA binding7.91E-03
74GO:0004034: aldose 1-epimerase activity7.91E-03
75GO:0047893: flavonol 3-O-glucosyltransferase activity7.91E-03
76GO:0052747: sinapyl alcohol dehydrogenase activity7.91E-03
77GO:0005544: calcium-dependent phospholipid binding7.91E-03
78GO:0004033: aldo-keto reductase (NADP) activity7.91E-03
79GO:0008483: transaminase activity7.92E-03
80GO:0008142: oxysterol binding9.09E-03
81GO:0016758: transferase activity, transferring hexosyl groups9.85E-03
82GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.03E-02
83GO:0004568: chitinase activity1.30E-02
84GO:0004864: protein phosphatase inhibitor activity1.30E-02
85GO:0042803: protein homodimerization activity1.33E-02
86GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.41E-02
87GO:0005506: iron ion binding1.54E-02
88GO:0003993: acid phosphatase activity1.55E-02
89GO:0045551: cinnamyl-alcohol dehydrogenase activity1.58E-02
90GO:0000149: SNARE binding1.62E-02
91GO:0051539: 4 iron, 4 sulfur cluster binding1.69E-02
92GO:0008194: UDP-glycosyltransferase activity1.77E-02
93GO:0005484: SNAP receptor activity1.91E-02
94GO:0005217: intracellular ligand-gated ion channel activity2.05E-02
95GO:0003712: transcription cofactor activity2.05E-02
96GO:0004970: ionotropic glutamate receptor activity2.05E-02
97GO:0005198: structural molecule activity2.15E-02
98GO:0051287: NAD binding2.32E-02
99GO:0019825: oxygen binding2.37E-02
100GO:0051536: iron-sulfur cluster binding2.38E-02
101GO:0035251: UDP-glucosyltransferase activity2.73E-02
102GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.91E-02
103GO:0008810: cellulase activity3.10E-02
104GO:0016887: ATPase activity3.24E-02
105GO:0003727: single-stranded RNA binding3.29E-02
106GO:0003756: protein disulfide isomerase activity3.29E-02
107GO:0004499: N,N-dimethylaniline monooxygenase activity3.29E-02
108GO:0080043: quercetin 3-O-glucosyltransferase activity3.35E-02
109GO:0080044: quercetin 7-O-glucosyltransferase activity3.35E-02
110GO:0047134: protein-disulfide reductase activity3.48E-02
111GO:0005102: receptor binding3.48E-02
112GO:0020037: heme binding3.73E-02
113GO:0015035: protein disulfide oxidoreductase activity3.78E-02
114GO:0043565: sequence-specific DNA binding3.81E-02
115GO:0004791: thioredoxin-disulfide reductase activity4.09E-02
116GO:0016853: isomerase activity4.09E-02
117GO:0010181: FMN binding4.09E-02
118GO:0004872: receptor activity4.30E-02
119GO:0046872: metal ion binding4.56E-02
120GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.71E-02
121GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.94E-02
RankGO TermAdjusted P value
1GO:0005789: endoplasmic reticulum membrane4.63E-07
2GO:0005794: Golgi apparatus8.33E-07
3GO:0016021: integral component of membrane1.86E-06
4GO:0017119: Golgi transport complex6.74E-05
5GO:0005801: cis-Golgi network3.30E-04
6GO:0045252: oxoglutarate dehydrogenase complex4.40E-04
7GO:0005886: plasma membrane4.58E-04
8GO:0005783: endoplasmic reticulum8.78E-04
9GO:0031314: extrinsic component of mitochondrial inner membrane9.50E-04
10GO:0030134: ER to Golgi transport vesicle9.50E-04
11GO:0005743: mitochondrial inner membrane1.11E-03
12GO:0005788: endoplasmic reticulum lumen1.36E-03
13GO:0005623: cell2.21E-03
14GO:0030658: transport vesicle membrane2.24E-03
15GO:0000164: protein phosphatase type 1 complex3.85E-03
16GO:0009506: plasmodesma4.17E-03
17GO:0005768: endosome4.47E-03
18GO:0009504: cell plate5.73E-03
19GO:0031965: nuclear membrane5.73E-03
20GO:0009986: cell surface6.80E-03
21GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane6.80E-03
22GO:0005779: integral component of peroxisomal membrane9.09E-03
23GO:0005786: signal recognition particle, endoplasmic reticulum targeting9.09E-03
24GO:0005811: lipid particle9.09E-03
25GO:0005802: trans-Golgi network1.01E-02
26GO:0031901: early endosome membrane1.03E-02
27GO:0030665: clathrin-coated vesicle membrane1.16E-02
28GO:0005774: vacuolar membrane1.51E-02
29GO:0031201: SNARE complex1.76E-02
30GO:0031902: late endosome membrane1.76E-02
31GO:0030176: integral component of endoplasmic reticulum membrane2.05E-02
32GO:0046658: anchored component of plasma membrane2.19E-02
33GO:0005829: cytosol2.27E-02
34GO:0009505: plant-type cell wall2.43E-02
35GO:0005741: mitochondrial outer membrane2.73E-02
36GO:0031410: cytoplasmic vesicle2.91E-02
37GO:0005744: mitochondrial inner membrane presequence translocase complex3.29E-02
38GO:0009706: chloroplast inner membrane3.67E-02
39GO:0005773: vacuole4.15E-02
40GO:0019898: extrinsic component of membrane4.30E-02
41GO:0009543: chloroplast thylakoid lumen4.58E-02
42GO:0071944: cell periphery4.94E-02
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Gene type



Gene DE type