co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G32900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
2	GO:0006021: inositol biosynthetic process	6.70E-06
3	GO:0071277: cellular response to calcium ion	8.43E-05
4	GO:0009773: photosynthetic electron transport in photosystem I	1.18E-04
5	GO:0080029: cellular response to boron-containing substance levels	2.00E-04
6	GO:0006898: receptor-mediated endocytosis	2.00E-04
7	GO:0006636: unsaturated fatty acid biosynthetic process	2.29E-04
8	GO:0046713: borate transport	4.84E-04
9	GO:0071484: cellular response to light intensity	4.84E-04
10	GO:0008654: phospholipid biosynthetic process	5.85E-04
11	GO:0071483: cellular response to blue light	6.44E-04
12	GO:0010117: photoprotection	8.14E-04
13	GO:0009904: chloroplast accumulation movement	8.14E-04
14	GO:0016120: carotene biosynthetic process	8.14E-04
15	GO:0009972: cytidine deamination	9.94E-04
16	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	9.94E-04
17	GO:0009903: chloroplast avoidance movement	1.18E-03
18	GO:0010189: vitamin E biosynthetic process	1.18E-03
19	GO:0008272: sulfate transport	1.39E-03
20	GO:1900057: positive regulation of leaf senescence	1.39E-03
21	GO:0009704: de-etiolation	1.60E-03
22	GO:0019827: stem cell population maintenance	1.60E-03
23	GO:0070413: trehalose metabolism in response to stress	1.60E-03
24	GO:0080167: response to karrikin	1.78E-03
25	GO:0009644: response to high light intensity	1.99E-03
26	GO:0009051: pentose-phosphate shunt, oxidative branch	2.06E-03
27	GO:0010206: photosystem II repair	2.06E-03
28	GO:0090333: regulation of stomatal closure	2.06E-03
29	GO:0015979: photosynthesis	2.10E-03
30	GO:0045454: cell redox homeostasis	2.23E-03
31	GO:0006535: cysteine biosynthetic process from serine	2.56E-03
32	GO:0006857: oligopeptide transport	2.64E-03
33	GO:0032259: methylation	2.75E-03
34	GO:0009698: phenylpropanoid metabolic process	2.82E-03
35	GO:0009725: response to hormone	3.37E-03
36	GO:0006094: gluconeogenesis	3.37E-03
37	GO:0007015: actin filament organization	3.66E-03
38	GO:0009266: response to temperature stimulus	3.66E-03
39	GO:0010143: cutin biosynthetic process	3.66E-03
40	GO:0010025: wax biosynthetic process	4.26E-03
41	GO:0005992: trehalose biosynthetic process	4.57E-03
42	GO:0019344: cysteine biosynthetic process	4.57E-03
43	GO:0016998: cell wall macromolecule catabolic process	5.22E-03
44	GO:0006633: fatty acid biosynthetic process	5.48E-03
45	GO:0030433: ubiquitin-dependent ERAD pathway	5.55E-03
46	GO:0019748: secondary metabolic process	5.55E-03
47	GO:0016117: carotenoid biosynthetic process	6.60E-03
48	GO:0010118: stomatal movement	6.97E-03
49	GO:0006606: protein import into nucleus	6.97E-03
50	GO:0006662: glycerol ether metabolic process	7.34E-03
51	GO:0055114: oxidation-reduction process	8.71E-03
52	GO:0009630: gravitropism	8.90E-03
53	GO:0051607: defense response to virus	1.06E-02
54	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.14E-02
55	GO:0009793: embryo development ending in seed dormancy	1.17E-02
56	GO:0042128: nitrate assimilation	1.19E-02
57	GO:0015995: chlorophyll biosynthetic process	1.23E-02
58	GO:0010411: xyloglucan metabolic process	1.23E-02
59	GO:0016311: dephosphorylation	1.28E-02
60	GO:0000160: phosphorelay signal transduction system	1.37E-02
61	GO:0010311: lateral root formation	1.37E-02
62	GO:0034599: cellular response to oxidative stress	1.62E-02
63	GO:0009733: response to auxin	1.70E-02
64	GO:0006631: fatty acid metabolic process	1.77E-02
65	GO:0042542: response to hydrogen peroxide	1.83E-02
66	GO:0010114: response to red light	1.88E-02
67	GO:0009744: response to sucrose	1.88E-02
68	GO:0051707: response to other organism	1.88E-02
69	GO:0042546: cell wall biogenesis	1.93E-02
70	GO:0000209: protein polyubiquitination	1.93E-02
71	GO:0009736: cytokinin-activated signaling pathway	2.32E-02
72	GO:0006364: rRNA processing	2.32E-02
73	GO:0006813: potassium ion transport	2.32E-02
74	GO:0006810: transport	2.39E-02
75	GO:0009734: auxin-activated signaling pathway	2.41E-02
76	GO:0006096: glycolytic process	2.62E-02
77	GO:0009624: response to nematode	2.98E-02
78	GO:0016036: cellular response to phosphate starvation	4.19E-02
79	GO:0007623: circadian rhythm	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
2	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
3	GO:0030794: (S)-coclaurine-N-methyltransferase activity	0.00E+00
4	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
5	GO:0016166: phytoene dehydrogenase activity	0.00E+00
6	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
7	GO:0045550: geranylgeranyl reductase activity	0.00E+00
8	GO:0004512: inositol-3-phosphate synthase activity	3.86E-07
9	GO:0015168: glycerol transmembrane transporter activity	8.43E-05
10	GO:0035671: enone reductase activity	8.43E-05
11	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	8.43E-05
12	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	8.43E-05
13	GO:0031957: very long-chain fatty acid-CoA ligase activity	8.43E-05
14	GO:0050017: L-3-cyanoalanine synthase activity	2.00E-04
15	GO:0042389: omega-3 fatty acid desaturase activity	2.00E-04
16	GO:0008509: anion transmembrane transporter activity	2.00E-04
17	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.00E-04
18	GO:0046715: borate transmembrane transporter activity	4.84E-04
19	GO:0017057: 6-phosphogluconolactonase activity	4.84E-04
20	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.84E-04
21	GO:0015204: urea transmembrane transporter activity	6.44E-04
22	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	8.14E-04
23	GO:0004332: fructose-bisphosphate aldolase activity	9.94E-04
24	GO:0004124: cysteine synthase activity	1.18E-03
25	GO:0004126: cytidine deaminase activity	1.18E-03
26	GO:0102391: decanoate--CoA ligase activity	1.18E-03
27	GO:0008168: methyltransferase activity	1.29E-03
28	GO:0004467: long-chain fatty acid-CoA ligase activity	1.39E-03
29	GO:0015140: malate transmembrane transporter activity	1.39E-03
30	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.83E-03
31	GO:0004185: serine-type carboxypeptidase activity	1.84E-03
32	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.30E-03
33	GO:0009055: electron carrier activity	3.17E-03
34	GO:0004565: beta-galactosidase activity	3.37E-03
35	GO:0015035: protein disulfide oxidoreductase activity	3.60E-03
36	GO:0008324: cation transmembrane transporter activity	4.89E-03
37	GO:0003756: protein disulfide isomerase activity	6.24E-03
38	GO:0047134: protein-disulfide reductase activity	6.60E-03
39	GO:0042802: identical protein binding	7.64E-03
40	GO:0004791: thioredoxin-disulfide reductase activity	7.72E-03
41	GO:0004872: receptor activity	8.10E-03
42	GO:0016762: xyloglucan:xyloglucosyl transferase activity	8.50E-03
43	GO:0000156: phosphorelay response regulator activity	9.30E-03
44	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	9.30E-03
45	GO:0016791: phosphatase activity	9.72E-03
46	GO:0015250: water channel activity	1.10E-02
47	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.23E-02
48	GO:0003993: acid phosphatase activity	1.62E-02
49	GO:0005215: transporter activity	1.67E-02
50	GO:0015293: symporter activity	2.04E-02
51	GO:0031625: ubiquitin protein ligase binding	2.50E-02
52	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.68E-02
53	GO:0016874: ligase activity	2.86E-02
54	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.57E-02
55	GO:0030170: pyridoxal phosphate binding	3.77E-02
56	GO:0004252: serine-type endopeptidase activity	3.77E-02
57	GO:0015144: carbohydrate transmembrane transporter activity	3.98E-02
58	GO:0008565: protein transporter activity	3.98E-02
59	GO:0005351: sugar:proton symporter activity	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	2.51E-11
2	GO:0009507: chloroplast	2.72E-08
3	GO:0009535: chloroplast thylakoid membrane	3.21E-06
4	GO:0009579: thylakoid	3.58E-05
5	GO:0009509: chromoplast	3.35E-04
6	GO:0009941: chloroplast envelope	9.09E-04
7	GO:0031982: vesicle	1.60E-03
8	GO:0031977: thylakoid lumen	1.70E-03
9	GO:0031969: chloroplast membrane	1.78E-03
10	GO:0008180: COP9 signalosome	2.06E-03
11	GO:0009543: chloroplast thylakoid lumen	4.37E-03
12	GO:0009654: photosystem II oxygen evolving complex	4.89E-03
13	GO:0019898: extrinsic component of membrane	8.10E-03
14	GO:0010319: stromule	1.01E-02
15	GO:0019005: SCF ubiquitin ligase complex	1.33E-02
16	GO:0048046: apoplast	2.31E-02
17	GO:0000502: proteasome complex	2.32E-02
18	GO:0005618: cell wall	2.62E-02
19	GO:0012505: endomembrane system	2.92E-02
20	GO:0010287: plastoglobule	3.37E-02
21	GO:0016021: integral component of membrane	4.07E-02
22	GO:0009705: plant-type vacuole membrane	4.40E-02
23	GO:0031225: anchored component of membrane	4.71E-02