co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G32550

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
2	GO:0042820: vitamin B6 catabolic process	0.00E+00
3	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
4	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
5	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
6	GO:0042821: pyridoxal biosynthetic process	0.00E+00
7	GO:0007638: mechanosensory behavior	0.00E+00
8	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
9	GO:1905177: tracheary element differentiation	0.00E+00
10	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
11	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
12	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
13	GO:0070979: protein K11-linked ubiquitination	0.00E+00
14	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
15	GO:2000505: regulation of energy homeostasis	0.00E+00
16	GO:0030155: regulation of cell adhesion	0.00E+00
17	GO:0017038: protein import	0.00E+00
18	GO:0090706: specification of plant organ position	0.00E+00
19	GO:0015979: photosynthesis	5.35E-07
20	GO:0045038: protein import into chloroplast thylakoid membrane	3.01E-06
21	GO:0010027: thylakoid membrane organization	1.44E-05
22	GO:0015995: chlorophyll biosynthetic process	2.16E-05
23	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	6.96E-05
24	GO:0032502: developmental process	1.06E-04
25	GO:0010207: photosystem II assembly	1.69E-04
26	GO:0010189: vitamin E biosynthetic process	3.55E-04
27	GO:0009658: chloroplast organization	4.44E-04
28	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	4.62E-04
29	GO:0043266: regulation of potassium ion transport	4.62E-04
30	GO:0006659: phosphatidylserine biosynthetic process	4.62E-04
31	GO:0051775: response to redox state	4.62E-04
32	GO:0042371: vitamin K biosynthetic process	4.62E-04
33	GO:2000021: regulation of ion homeostasis	4.62E-04
34	GO:0051247: positive regulation of protein metabolic process	4.62E-04
35	GO:1902458: positive regulation of stomatal opening	4.62E-04
36	GO:2000905: negative regulation of starch metabolic process	4.62E-04
37	GO:0010450: inflorescence meristem growth	4.62E-04
38	GO:0009443: pyridoxal 5'-phosphate salvage	4.62E-04
39	GO:0006605: protein targeting	5.71E-04
40	GO:0048564: photosystem I assembly	5.71E-04
41	GO:0071482: cellular response to light stimulus	6.96E-04
42	GO:0060359: response to ammonium ion	9.96E-04
43	GO:0048255: mRNA stabilization	9.96E-04
44	GO:0018026: peptidyl-lysine monomethylation	9.96E-04
45	GO:1904143: positive regulation of carotenoid biosynthetic process	9.96E-04
46	GO:1903426: regulation of reactive oxygen species biosynthetic process	9.96E-04
47	GO:0010024: phytochromobilin biosynthetic process	9.96E-04
48	GO:0010275: NAD(P)H dehydrogenase complex assembly	9.96E-04
49	GO:0043085: positive regulation of catalytic activity	1.32E-03
50	GO:0019684: photosynthesis, light reaction	1.32E-03
51	GO:0016024: CDP-diacylglycerol biosynthetic process	1.51E-03
52	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.62E-03
53	GO:0010623: programmed cell death involved in cell development	1.62E-03
54	GO:0006788: heme oxidation	1.62E-03
55	GO:0006696: ergosterol biosynthetic process	1.62E-03
56	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	1.62E-03
57	GO:0043157: response to cation stress	1.62E-03
58	GO:0005977: glycogen metabolic process	1.62E-03
59	GO:0045165: cell fate commitment	1.62E-03
60	GO:0048586: regulation of long-day photoperiodism, flowering	1.62E-03
61	GO:0048281: inflorescence morphogenesis	1.62E-03
62	GO:0006954: inflammatory response	1.62E-03
63	GO:0009767: photosynthetic electron transport chain	1.71E-03
64	GO:0046739: transport of virus in multicellular host	2.35E-03
65	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.35E-03
66	GO:0006168: adenine salvage	2.35E-03
67	GO:0010148: transpiration	2.35E-03
68	GO:0006986: response to unfolded protein	2.35E-03
69	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	2.35E-03
70	GO:0016556: mRNA modification	2.35E-03
71	GO:2001141: regulation of RNA biosynthetic process	2.35E-03
72	GO:0006166: purine ribonucleoside salvage	2.35E-03
73	GO:0007231: osmosensory signaling pathway	2.35E-03
74	GO:0030071: regulation of mitotic metaphase/anaphase transition	2.35E-03
75	GO:0051085: chaperone mediated protein folding requiring cofactor	2.35E-03
76	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.35E-03
77	GO:0006107: oxaloacetate metabolic process	2.35E-03
78	GO:0009226: nucleotide-sugar biosynthetic process	2.35E-03
79	GO:0009944: polarity specification of adaxial/abaxial axis	2.68E-03
80	GO:0007017: microtubule-based process	2.96E-03
81	GO:0006546: glycine catabolic process	3.16E-03
82	GO:0006021: inositol biosynthetic process	3.16E-03
83	GO:0006734: NADH metabolic process	3.16E-03
84	GO:0010508: positive regulation of autophagy	3.16E-03
85	GO:0010021: amylopectin biosynthetic process	3.16E-03
86	GO:0010109: regulation of photosynthesis	3.16E-03
87	GO:0010107: potassium ion import	3.16E-03
88	GO:0019464: glycine decarboxylation via glycine cleavage system	3.16E-03
89	GO:0033500: carbohydrate homeostasis	3.16E-03
90	GO:0009765: photosynthesis, light harvesting	3.16E-03
91	GO:2000306: positive regulation of photomorphogenesis	3.16E-03
92	GO:0031122: cytoplasmic microtubule organization	3.16E-03
93	GO:0006109: regulation of carbohydrate metabolic process	3.16E-03
94	GO:0006730: one-carbon metabolic process	3.56E-03
95	GO:0098719: sodium ion import across plasma membrane	4.05E-03
96	GO:0010236: plastoquinone biosynthetic process	4.05E-03
97	GO:0009107: lipoate biosynthetic process	4.05E-03
98	GO:1902183: regulation of shoot apical meristem development	4.05E-03
99	GO:0044209: AMP salvage	4.05E-03
100	GO:0000304: response to singlet oxygen	4.05E-03
101	GO:0080110: sporopollenin biosynthetic process	4.05E-03
102	GO:0010158: abaxial cell fate specification	4.05E-03
103	GO:0032876: negative regulation of DNA endoreduplication	4.05E-03
104	GO:0019722: calcium-mediated signaling	4.23E-03
105	GO:0010190: cytochrome b6f complex assembly	5.02E-03
106	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	5.02E-03
107	GO:0016554: cytidine to uridine editing	5.02E-03
108	GO:0032973: amino acid export	5.02E-03
109	GO:0050665: hydrogen peroxide biosynthetic process	5.02E-03
110	GO:0000741: karyogamy	5.02E-03
111	GO:0006751: glutathione catabolic process	5.02E-03
112	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	5.02E-03
113	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.02E-03
114	GO:0009959: negative gravitropism	5.02E-03
115	GO:0006655: phosphatidylglycerol biosynthetic process	5.02E-03
116	GO:0006555: methionine metabolic process	5.02E-03
117	GO:0009646: response to absence of light	5.75E-03
118	GO:0055114: oxidation-reduction process	6.01E-03
119	GO:0006458: 'de novo' protein folding	6.06E-03
120	GO:0017148: negative regulation of translation	6.06E-03
121	GO:0048280: vesicle fusion with Golgi apparatus	6.06E-03
122	GO:0042026: protein refolding	6.06E-03
123	GO:1901259: chloroplast rRNA processing	6.06E-03
124	GO:0009854: oxidative photosynthetic carbon pathway	6.06E-03
125	GO:0010019: chloroplast-nucleus signaling pathway	6.06E-03
126	GO:0080086: stamen filament development	6.06E-03
127	GO:0008654: phospholipid biosynthetic process	6.17E-03
128	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	7.16E-03
129	GO:0006400: tRNA modification	7.16E-03
130	GO:0010103: stomatal complex morphogenesis	7.16E-03
131	GO:0043090: amino acid import	7.16E-03
132	GO:0070370: cellular heat acclimation	7.16E-03
133	GO:0009690: cytokinin metabolic process	8.33E-03
134	GO:0032875: regulation of DNA endoreduplication	8.33E-03
135	GO:0042255: ribosome assembly	8.33E-03
136	GO:0046620: regulation of organ growth	8.33E-03
137	GO:2000070: regulation of response to water deprivation	8.33E-03
138	GO:0006353: DNA-templated transcription, termination	8.33E-03
139	GO:0055075: potassium ion homeostasis	8.33E-03
140	GO:0007155: cell adhesion	8.33E-03
141	GO:0007267: cell-cell signaling	8.53E-03
142	GO:0009742: brassinosteroid mediated signaling pathway	9.05E-03
143	GO:0007186: G-protein coupled receptor signaling pathway	9.57E-03
144	GO:0010204: defense response signaling pathway, resistance gene-independent	9.57E-03
145	GO:0010497: plasmodesmata-mediated intercellular transport	9.57E-03
146	GO:0009657: plastid organization	9.57E-03
147	GO:0032544: plastid translation	9.57E-03
148	GO:0017004: cytochrome complex assembly	9.57E-03
149	GO:0010093: specification of floral organ identity	9.57E-03
150	GO:0001558: regulation of cell growth	9.57E-03
151	GO:0015996: chlorophyll catabolic process	9.57E-03
152	GO:2000024: regulation of leaf development	1.09E-02
153	GO:0090333: regulation of stomatal closure	1.09E-02
154	GO:0046916: cellular transition metal ion homeostasis	1.09E-02
155	GO:0010206: photosystem II repair	1.09E-02
156	GO:0080144: amino acid homeostasis	1.09E-02
157	GO:0009086: methionine biosynthetic process	1.22E-02
158	GO:1900865: chloroplast RNA modification	1.22E-02
159	GO:0051453: regulation of intracellular pH	1.22E-02
160	GO:0009638: phototropism	1.22E-02
161	GO:0006779: porphyrin-containing compound biosynthetic process	1.22E-02
162	GO:0035999: tetrahydrofolate interconversion	1.22E-02
163	GO:0018298: protein-chromophore linkage	1.25E-02
164	GO:0009735: response to cytokinin	1.26E-02
165	GO:0006896: Golgi to vacuole transport	1.37E-02
166	GO:0006782: protoporphyrinogen IX biosynthetic process	1.37E-02
167	GO:0019538: protein metabolic process	1.37E-02
168	GO:0009641: shade avoidance	1.37E-02
169	GO:0006810: transport	1.50E-02
170	GO:0006816: calcium ion transport	1.51E-02
171	GO:0006352: DNA-templated transcription, initiation	1.51E-02
172	GO:0006415: translational termination	1.51E-02
173	GO:0009089: lysine biosynthetic process via diaminopimelate	1.51E-02
174	GO:0005983: starch catabolic process	1.67E-02
175	GO:0045037: protein import into chloroplast stroma	1.67E-02
176	GO:0045490: pectin catabolic process	1.69E-02
177	GO:0006108: malate metabolic process	1.82E-02
178	GO:0030001: metal ion transport	1.82E-02
179	GO:0010143: cutin biosynthetic process	1.99E-02
180	GO:0009933: meristem structural organization	1.99E-02
181	GO:0010030: positive regulation of seed germination	2.16E-02
182	GO:0070588: calcium ion transmembrane transport	2.16E-02
183	GO:0019853: L-ascorbic acid biosynthetic process	2.16E-02
184	GO:0006855: drug transmembrane transport	2.41E-02
185	GO:0051302: regulation of cell division	2.69E-02
186	GO:0008299: isoprenoid biosynthetic process	2.69E-02
187	GO:0051603: proteolysis involved in cellular protein catabolic process	2.88E-02
188	GO:0048511: rhythmic process	2.88E-02
189	GO:0010431: seed maturation	2.88E-02
190	GO:0031408: oxylipin biosynthetic process	2.88E-02
191	GO:0019915: lipid storage	2.88E-02
192	GO:0061077: chaperone-mediated protein folding	2.88E-02
193	GO:0030245: cellulose catabolic process	3.07E-02
194	GO:0009909: regulation of flower development	3.08E-02
195	GO:0009686: gibberellin biosynthetic process	3.27E-02
196	GO:0001944: vasculature development	3.27E-02
197	GO:0006012: galactose metabolic process	3.27E-02
198	GO:0006096: glycolytic process	3.29E-02
199	GO:0009306: protein secretion	3.47E-02
200	GO:0009561: megagametogenesis	3.47E-02
201	GO:0010089: xylem development	3.47E-02
202	GO:0010584: pollen exine formation	3.47E-02
203	GO:0042147: retrograde transport, endosome to Golgi	3.67E-02
204	GO:0016117: carotenoid biosynthetic process	3.67E-02
205	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.67E-02
206	GO:0008033: tRNA processing	3.88E-02
207	GO:0000413: protein peptidyl-prolyl isomerization	3.88E-02
208	GO:0010087: phloem or xylem histogenesis	3.88E-02
209	GO:0042631: cellular response to water deprivation	3.88E-02
210	GO:0045489: pectin biosynthetic process	4.09E-02
211	GO:0006662: glycerol ether metabolic process	4.09E-02
212	GO:0010154: fruit development	4.09E-02
213	GO:0010197: polar nucleus fusion	4.09E-02
214	GO:0010182: sugar mediated signaling pathway	4.09E-02
215	GO:0048868: pollen tube development	4.09E-02
216	GO:0009741: response to brassinosteroid	4.09E-02
217	GO:0010268: brassinosteroid homeostasis	4.09E-02
218	GO:0006885: regulation of pH	4.09E-02
219	GO:0048544: recognition of pollen	4.31E-02
220	GO:0006814: sodium ion transport	4.31E-02
221	GO:0042752: regulation of circadian rhythm	4.31E-02
222	GO:0009416: response to light stimulus	4.39E-02
223	GO:0006623: protein targeting to vacuole	4.53E-02
224	GO:0009791: post-embryonic development	4.53E-02
225	GO:0019252: starch biosynthetic process	4.53E-02
226	GO:0006891: intra-Golgi vesicle-mediated transport	4.75E-02
227	GO:0016132: brassinosteroid biosynthetic process	4.75E-02
228	GO:0009630: gravitropism	4.98E-02
229	GO:0010583: response to cyclopentenone	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
2	GO:0050613: delta14-sterol reductase activity	0.00E+00
3	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
4	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
5	GO:0010276: phytol kinase activity	0.00E+00
6	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
7	GO:0046905: phytoene synthase activity	0.00E+00
8	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
9	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
10	GO:0005048: signal sequence binding	0.00E+00
11	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
12	GO:0019899: enzyme binding	1.55E-05
13	GO:0004033: aldo-keto reductase (NADP) activity	2.30E-05
14	GO:0070402: NADPH binding	3.23E-05
15	GO:0016851: magnesium chelatase activity	6.96E-05
16	GO:0043495: protein anchor	1.22E-04
17	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.22E-04
18	GO:0005528: FK506 binding	2.70E-04
19	GO:0030570: pectate lyase activity	4.45E-04
20	GO:0019203: carbohydrate phosphatase activity	4.62E-04
21	GO:0050308: sugar-phosphatase activity	4.62E-04
22	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	4.62E-04
23	GO:0005080: protein kinase C binding	4.62E-04
24	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	4.62E-04
25	GO:0008746: NAD(P)+ transhydrogenase activity	4.62E-04
26	GO:0051996: squalene synthase activity	4.62E-04
27	GO:0004328: formamidase activity	4.62E-04
28	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	4.62E-04
29	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	4.62E-04
30	GO:0046906: tetrapyrrole binding	4.62E-04
31	GO:0051777: ent-kaurenoate oxidase activity	4.62E-04
32	GO:0008568: microtubule-severing ATPase activity	4.62E-04
33	GO:0019843: rRNA binding	4.88E-04
34	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.93E-04
35	GO:0048038: quinone binding	8.75E-04
36	GO:0019156: isoamylase activity	9.96E-04
37	GO:0004802: transketolase activity	9.96E-04
38	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	9.96E-04
39	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	9.96E-04
40	GO:0004512: inositol-3-phosphate synthase activity	9.96E-04
41	GO:0048531: beta-1,3-galactosyltransferase activity	9.96E-04
42	GO:0003839: gamma-glutamylcyclotransferase activity	9.96E-04
43	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	9.96E-04
44	GO:0004047: aminomethyltransferase activity	9.96E-04
45	GO:0016992: lipoate synthase activity	1.62E-03
46	GO:0004751: ribose-5-phosphate isomerase activity	1.62E-03
47	GO:0015462: ATPase-coupled protein transmembrane transporter activity	1.62E-03
48	GO:0005504: fatty acid binding	1.62E-03
49	GO:0051082: unfolded protein binding	1.68E-03
50	GO:0031072: heat shock protein binding	1.71E-03
51	GO:0008266: poly(U) RNA binding	1.93E-03
52	GO:0016149: translation release factor activity, codon specific	2.35E-03
53	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	2.35E-03
54	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.35E-03
55	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.35E-03
56	GO:0043023: ribosomal large subunit binding	2.35E-03
57	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.35E-03
58	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.35E-03
59	GO:0004375: glycine dehydrogenase (decarboxylating) activity	2.35E-03
60	GO:0003999: adenine phosphoribosyltransferase activity	2.35E-03
61	GO:0016829: lyase activity	2.68E-03
62	GO:0016987: sigma factor activity	3.16E-03
63	GO:0019199: transmembrane receptor protein kinase activity	3.16E-03
64	GO:0042277: peptide binding	3.16E-03
65	GO:0004392: heme oxygenase (decyclizing) activity	3.16E-03
66	GO:0008891: glycolate oxidase activity	3.16E-03
67	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	3.16E-03
68	GO:0016279: protein-lysine N-methyltransferase activity	3.16E-03
69	GO:0001053: plastid sigma factor activity	3.16E-03
70	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	3.16E-03
71	GO:0045430: chalcone isomerase activity	3.16E-03
72	GO:0004045: aminoacyl-tRNA hydrolase activity	3.16E-03
73	GO:0022891: substrate-specific transmembrane transporter activity	3.89E-03
74	GO:0016773: phosphotransferase activity, alcohol group as acceptor	4.05E-03
75	GO:0016491: oxidoreductase activity	4.41E-03
76	GO:0004556: alpha-amylase activity	5.02E-03
77	GO:0004462: lactoylglutathione lyase activity	5.02E-03
78	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	5.02E-03
79	GO:0015081: sodium ion transmembrane transporter activity	5.02E-03
80	GO:0016615: malate dehydrogenase activity	5.02E-03
81	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	5.02E-03
82	GO:0008200: ion channel inhibitor activity	5.02E-03
83	GO:2001070: starch binding	5.02E-03
84	GO:0004605: phosphatidate cytidylyltransferase activity	5.02E-03
85	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	6.06E-03
86	GO:0030060: L-malate dehydrogenase activity	6.06E-03
87	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	6.06E-03
88	GO:0004017: adenylate kinase activity	6.06E-03
89	GO:0008312: 7S RNA binding	8.33E-03
90	GO:0008483: transaminase activity	8.53E-03
91	GO:0005200: structural constituent of cytoskeleton	8.53E-03
92	GO:0046914: transition metal ion binding	9.57E-03
93	GO:0016168: chlorophyll binding	1.01E-02
94	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.09E-02
95	GO:0003747: translation release factor activity	1.09E-02
96	GO:0030955: potassium ion binding	1.22E-02
97	GO:0004743: pyruvate kinase activity	1.22E-02
98	GO:0015238: drug transmembrane transporter activity	1.32E-02
99	GO:0008047: enzyme activator activity	1.37E-02
100	GO:0015020: glucuronosyltransferase activity	1.37E-02
101	GO:0015386: potassium:proton antiporter activity	1.51E-02
102	GO:0044183: protein binding involved in protein folding	1.51E-02
103	GO:0005509: calcium ion binding	1.57E-02
104	GO:0008378: galactosyltransferase activity	1.67E-02
105	GO:0005262: calcium channel activity	1.82E-02
106	GO:0003924: GTPase activity	1.89E-02
107	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.99E-02
108	GO:0004185: serine-type carboxypeptidase activity	2.06E-02
109	GO:0035091: phosphatidylinositol binding	2.23E-02
110	GO:0042802: identical protein binding	2.29E-02
111	GO:0004857: enzyme inhibitor activity	2.51E-02
112	GO:0051087: chaperone binding	2.69E-02
113	GO:0043424: protein histidine kinase binding	2.69E-02
114	GO:0003735: structural constituent of ribosome	2.80E-02
115	GO:0003690: double-stranded DNA binding	2.88E-02
116	GO:0008810: cellulase activity	3.27E-02
117	GO:0005525: GTP binding	3.41E-02
118	GO:0003727: single-stranded RNA binding	3.47E-02
119	GO:0047134: protein-disulfide reductase activity	3.67E-02
120	GO:0016746: transferase activity, transferring acyl groups	4.07E-02
121	GO:0050662: coenzyme binding	4.31E-02
122	GO:0010181: FMN binding	4.31E-02
123	GO:0004791: thioredoxin-disulfide reductase activity	4.31E-02
124	GO:0016853: isomerase activity	4.31E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	4.90E-44
3	GO:0009570: chloroplast stroma	3.74E-29
4	GO:0009535: chloroplast thylakoid membrane	3.54E-18
5	GO:0009579: thylakoid	5.15E-16
6	GO:0009543: chloroplast thylakoid lumen	5.86E-12
7	GO:0009941: chloroplast envelope	8.04E-11
8	GO:0031977: thylakoid lumen	1.40E-08
9	GO:0009534: chloroplast thylakoid	1.55E-08
10	GO:0009654: photosystem II oxygen evolving complex	6.08E-07
11	GO:0080085: signal recognition particle, chloroplast targeting	9.42E-06
12	GO:0031969: chloroplast membrane	2.45E-05
13	GO:0010007: magnesium chelatase complex	3.23E-05
14	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.43E-05
15	GO:0019898: extrinsic component of membrane	8.25E-05
16	GO:0042651: thylakoid membrane	3.09E-04
17	GO:0009344: nitrite reductase complex [NAD(P)H]	4.62E-04
18	GO:0009547: plastid ribosome	4.62E-04
19	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	6.96E-04
20	GO:0010319: stromule	1.20E-03
21	GO:0000311: plastid large ribosomal subunit	1.51E-03
22	GO:0009528: plastid inner membrane	1.62E-03
23	GO:0030095: chloroplast photosystem II	1.93E-03
24	GO:0015630: microtubule cytoskeleton	2.35E-03
25	GO:0005960: glycine cleavage complex	2.35E-03
26	GO:0005840: ribosome	2.56E-03
27	GO:0009527: plastid outer membrane	3.16E-03
28	GO:0009523: photosystem II	6.17E-03
29	GO:0009533: chloroplast stromal thylakoid	7.16E-03
30	GO:0012507: ER to Golgi transport vesicle membrane	8.33E-03
31	GO:0009539: photosystem II reaction center	9.57E-03
32	GO:0030529: intracellular ribonucleoprotein complex	9.59E-03
33	GO:0045298: tubulin complex	1.09E-02
34	GO:0005680: anaphase-promoting complex	1.09E-02
35	GO:0016604: nuclear body	1.22E-02
36	GO:0009508: plastid chromosome	1.82E-02
37	GO:0030176: integral component of endoplasmic reticulum membrane	2.16E-02
38	GO:0043234: protein complex	2.33E-02
39	GO:0009505: plant-type cell wall	2.80E-02
40	GO:0009532: plastid stroma	2.88E-02
41	GO:0016020: membrane	3.36E-02
42	GO:0009522: photosystem I	4.31E-02
43	GO:0048046: apoplast	4.40E-02
44	GO:0010287: plastoglobule	4.67E-02