GO Enrichment Analysis of Co-expressed Genes with
AT1G32360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 4 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 5 | GO:0005977: glycogen metabolic process | 1.03E-06 |
| 6 | GO:0010021: amylopectin biosynthetic process | 4.77E-06 |
| 7 | GO:0009658: chloroplast organization | 7.51E-06 |
| 8 | GO:0019252: starch biosynthetic process | 1.76E-05 |
| 9 | GO:0000476: maturation of 4.5S rRNA | 6.91E-05 |
| 10 | GO:0009443: pyridoxal 5'-phosphate salvage | 6.91E-05 |
| 11 | GO:0000967: rRNA 5'-end processing | 6.91E-05 |
| 12 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 6.91E-05 |
| 13 | GO:0046900: tetrahydrofolylpolyglutamate metabolic process | 6.91E-05 |
| 14 | GO:0006659: phosphatidylserine biosynthetic process | 6.91E-05 |
| 15 | GO:0051775: response to redox state | 6.91E-05 |
| 16 | GO:0000256: allantoin catabolic process | 1.66E-04 |
| 17 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.66E-04 |
| 18 | GO:0034470: ncRNA processing | 1.66E-04 |
| 19 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.66E-04 |
| 20 | GO:0006954: inflammatory response | 2.81E-04 |
| 21 | GO:0010136: ureide catabolic process | 2.81E-04 |
| 22 | GO:0034051: negative regulation of plant-type hypersensitive response | 2.81E-04 |
| 23 | GO:0006760: folic acid-containing compound metabolic process | 2.81E-04 |
| 24 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.06E-04 |
| 25 | GO:0090308: regulation of methylation-dependent chromatin silencing | 4.06E-04 |
| 26 | GO:0006107: oxaloacetate metabolic process | 4.06E-04 |
| 27 | GO:0006145: purine nucleobase catabolic process | 4.06E-04 |
| 28 | GO:0008654: phospholipid biosynthetic process | 4.53E-04 |
| 29 | GO:0009791: post-embryonic development | 4.53E-04 |
| 30 | GO:0032502: developmental process | 5.17E-04 |
| 31 | GO:0010107: potassium ion import | 5.42E-04 |
| 32 | GO:0046656: folic acid biosynthetic process | 5.42E-04 |
| 33 | GO:0006021: inositol biosynthetic process | 5.42E-04 |
| 34 | GO:0006734: NADH metabolic process | 5.42E-04 |
| 35 | GO:0098719: sodium ion import across plasma membrane | 6.87E-04 |
| 36 | GO:0000278: mitotic cell cycle | 6.87E-04 |
| 37 | GO:0050665: hydrogen peroxide biosynthetic process | 8.40E-04 |
| 38 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 8.40E-04 |
| 39 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 8.40E-04 |
| 40 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 9.99E-04 |
| 41 | GO:0048280: vesicle fusion with Golgi apparatus | 9.99E-04 |
| 42 | GO:0046654: tetrahydrofolate biosynthetic process | 9.99E-04 |
| 43 | GO:0010189: vitamin E biosynthetic process | 9.99E-04 |
| 44 | GO:0009854: oxidative photosynthetic carbon pathway | 9.99E-04 |
| 45 | GO:1901259: chloroplast rRNA processing | 9.99E-04 |
| 46 | GO:1900056: negative regulation of leaf senescence | 1.17E-03 |
| 47 | GO:0055075: potassium ion homeostasis | 1.34E-03 |
| 48 | GO:0042255: ribosome assembly | 1.34E-03 |
| 49 | GO:0006353: DNA-templated transcription, termination | 1.34E-03 |
| 50 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.53E-03 |
| 51 | GO:0090333: regulation of stomatal closure | 1.73E-03 |
| 52 | GO:0007346: regulation of mitotic cell cycle | 1.93E-03 |
| 53 | GO:0051453: regulation of intracellular pH | 1.93E-03 |
| 54 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.93E-03 |
| 55 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.93E-03 |
| 56 | GO:0006896: Golgi to vacuole transport | 2.14E-03 |
| 57 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.14E-03 |
| 58 | GO:0072593: reactive oxygen species metabolic process | 2.36E-03 |
| 59 | GO:0010216: maintenance of DNA methylation | 2.36E-03 |
| 60 | GO:0006108: malate metabolic process | 2.82E-03 |
| 61 | GO:0006541: glutamine metabolic process | 3.06E-03 |
| 62 | GO:0019853: L-ascorbic acid biosynthetic process | 3.30E-03 |
| 63 | GO:0042023: DNA endoreduplication | 3.56E-03 |
| 64 | GO:0008299: isoprenoid biosynthetic process | 4.08E-03 |
| 65 | GO:0005975: carbohydrate metabolic process | 4.13E-03 |
| 66 | GO:0003333: amino acid transmembrane transport | 4.35E-03 |
| 67 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.83E-03 |
| 68 | GO:0006012: galactose metabolic process | 4.91E-03 |
| 69 | GO:0009306: protein secretion | 5.20E-03 |
| 70 | GO:0042147: retrograde transport, endosome to Golgi | 5.50E-03 |
| 71 | GO:0008380: RNA splicing | 5.51E-03 |
| 72 | GO:0006885: regulation of pH | 6.11E-03 |
| 73 | GO:0009741: response to brassinosteroid | 6.11E-03 |
| 74 | GO:0006814: sodium ion transport | 6.42E-03 |
| 75 | GO:0009646: response to absence of light | 6.42E-03 |
| 76 | GO:0006623: protein targeting to vacuole | 6.74E-03 |
| 77 | GO:0006891: intra-Golgi vesicle-mediated transport | 7.07E-03 |
| 78 | GO:1901657: glycosyl compound metabolic process | 7.73E-03 |
| 79 | GO:0010027: thylakoid membrane organization | 9.13E-03 |
| 80 | GO:0015995: chlorophyll biosynthetic process | 1.02E-02 |
| 81 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.02E-02 |
| 82 | GO:0009910: negative regulation of flower development | 1.22E-02 |
| 83 | GO:0034599: cellular response to oxidative stress | 1.34E-02 |
| 84 | GO:0006099: tricarboxylic acid cycle | 1.34E-02 |
| 85 | GO:0051707: response to other organism | 1.56E-02 |
| 86 | GO:0006857: oligopeptide transport | 2.02E-02 |
| 87 | GO:0009416: response to light stimulus | 2.33E-02 |
| 88 | GO:0016569: covalent chromatin modification | 2.37E-02 |
| 89 | GO:0009624: response to nematode | 2.47E-02 |
| 90 | GO:0051726: regulation of cell cycle | 2.58E-02 |
| 91 | GO:0009742: brassinosteroid mediated signaling pathway | 2.58E-02 |
| 92 | GO:0045893: positive regulation of transcription, DNA-templated | 2.67E-02 |
| 93 | GO:0055114: oxidation-reduction process | 2.80E-02 |
| 94 | GO:0009845: seed germination | 3.07E-02 |
| 95 | GO:0010150: leaf senescence | 3.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 2 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 3 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 4 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 5 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 6 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 7 | GO:0019156: isoamylase activity | 2.70E-07 |
| 8 | GO:0070402: NADPH binding | 1.03E-06 |
| 9 | GO:0004556: alpha-amylase activity | 1.23E-05 |
| 10 | GO:0004033: aldo-keto reductase (NADP) activity | 3.18E-05 |
| 11 | GO:0008242: omega peptidase activity | 6.91E-05 |
| 12 | GO:0008746: NAD(P)+ transhydrogenase activity | 6.91E-05 |
| 13 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 1.66E-04 |
| 14 | GO:0004150: dihydroneopterin aldolase activity | 1.66E-04 |
| 15 | GO:0034722: gamma-glutamyl-peptidase activity | 1.66E-04 |
| 16 | GO:0004103: choline kinase activity | 1.66E-04 |
| 17 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 1.66E-04 |
| 18 | GO:0004512: inositol-3-phosphate synthase activity | 1.66E-04 |
| 19 | GO:0004751: ribose-5-phosphate isomerase activity | 2.81E-04 |
| 20 | GO:0004848: ureidoglycolate hydrolase activity | 2.81E-04 |
| 21 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 4.06E-04 |
| 22 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 4.06E-04 |
| 23 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 4.06E-04 |
| 24 | GO:0009011: starch synthase activity | 5.42E-04 |
| 25 | GO:0008891: glycolate oxidase activity | 5.42E-04 |
| 26 | GO:0004045: aminoacyl-tRNA hydrolase activity | 5.42E-04 |
| 27 | GO:0080032: methyl jasmonate esterase activity | 5.42E-04 |
| 28 | GO:0015081: sodium ion transmembrane transporter activity | 8.40E-04 |
| 29 | GO:0016615: malate dehydrogenase activity | 8.40E-04 |
| 30 | GO:0008200: ion channel inhibitor activity | 8.40E-04 |
| 31 | GO:0004605: phosphatidate cytidylyltransferase activity | 8.40E-04 |
| 32 | GO:0080030: methyl indole-3-acetate esterase activity | 8.40E-04 |
| 33 | GO:0008195: phosphatidate phosphatase activity | 9.99E-04 |
| 34 | GO:0030060: L-malate dehydrogenase activity | 9.99E-04 |
| 35 | GO:0008135: translation factor activity, RNA binding | 1.53E-03 |
| 36 | GO:0015174: basic amino acid transmembrane transporter activity | 1.93E-03 |
| 37 | GO:0015020: glucuronosyltransferase activity | 2.14E-03 |
| 38 | GO:0008559: xenobiotic-transporting ATPase activity | 2.36E-03 |
| 39 | GO:0015386: potassium:proton antiporter activity | 2.36E-03 |
| 40 | GO:0019843: rRNA binding | 3.36E-03 |
| 41 | GO:0043130: ubiquitin binding | 3.81E-03 |
| 42 | GO:0008565: protein transporter activity | 4.01E-03 |
| 43 | GO:0003727: single-stranded RNA binding | 5.20E-03 |
| 44 | GO:0016853: isomerase activity | 6.42E-03 |
| 45 | GO:0010181: FMN binding | 6.42E-03 |
| 46 | GO:0019901: protein kinase binding | 6.74E-03 |
| 47 | GO:0015385: sodium:proton antiporter activity | 7.73E-03 |
| 48 | GO:0005525: GTP binding | 8.05E-03 |
| 49 | GO:0008237: metallopeptidase activity | 8.42E-03 |
| 50 | GO:0102483: scopolin beta-glucosidase activity | 1.02E-02 |
| 51 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.18E-02 |
| 52 | GO:0004222: metalloendopeptidase activity | 1.18E-02 |
| 53 | GO:0030145: manganese ion binding | 1.22E-02 |
| 54 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.22E-02 |
| 55 | GO:0003746: translation elongation factor activity | 1.30E-02 |
| 56 | GO:0003993: acid phosphatase activity | 1.34E-02 |
| 57 | GO:0008422: beta-glucosidase activity | 1.38E-02 |
| 58 | GO:0000149: SNARE binding | 1.38E-02 |
| 59 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.38E-02 |
| 60 | GO:0042393: histone binding | 1.43E-02 |
| 61 | GO:0016491: oxidoreductase activity | 1.49E-02 |
| 62 | GO:0005484: SNAP receptor activity | 1.56E-02 |
| 63 | GO:0003690: double-stranded DNA binding | 1.97E-02 |
| 64 | GO:0015171: amino acid transmembrane transporter activity | 2.07E-02 |
| 65 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.32E-02 |
| 66 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.32E-02 |
| 67 | GO:0022857: transmembrane transporter activity | 2.37E-02 |
| 68 | GO:0016787: hydrolase activity | 2.74E-02 |
| 69 | GO:0015144: carbohydrate transmembrane transporter activity | 3.30E-02 |
| 70 | GO:0005351: sugar:proton symporter activity | 3.59E-02 |
| 71 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.32E-02 |
| 72 | GO:0004601: peroxidase activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.64E-11 |
| 3 | GO:0033281: TAT protein transport complex | 2.81E-04 |
| 4 | GO:0030658: transport vesicle membrane | 4.06E-04 |
| 5 | GO:0031969: chloroplast membrane | 1.27E-03 |
| 6 | GO:0012507: ER to Golgi transport vesicle membrane | 1.34E-03 |
| 7 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 1.53E-03 |
| 8 | GO:0005720: nuclear heterochromatin | 1.73E-03 |
| 9 | GO:0009706: chloroplast inner membrane | 2.69E-03 |
| 10 | GO:0009508: plastid chromosome | 2.82E-03 |
| 11 | GO:0009570: chloroplast stroma | 3.56E-03 |
| 12 | GO:0016021: integral component of membrane | 3.69E-03 |
| 13 | GO:0009535: chloroplast thylakoid membrane | 7.44E-03 |
| 14 | GO:0005773: vacuole | 8.19E-03 |
| 15 | GO:0009295: nucleoid | 8.42E-03 |
| 16 | GO:0030529: intracellular ribonucleoprotein complex | 9.13E-03 |
| 17 | GO:0019005: SCF ubiquitin ligase complex | 1.10E-02 |
| 18 | GO:0009707: chloroplast outer membrane | 1.10E-02 |
| 19 | GO:0000325: plant-type vacuole | 1.22E-02 |
| 20 | GO:0031902: late endosome membrane | 1.47E-02 |
| 21 | GO:0031977: thylakoid lumen | 1.47E-02 |
| 22 | GO:0031201: SNARE complex | 1.47E-02 |
| 23 | GO:0009579: thylakoid | 2.78E-02 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 2.90E-02 |
| 25 | GO:0009705: plant-type vacuole membrane | 3.65E-02 |