co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G31410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0046460: neutral lipid biosynthetic process	0.00E+00
3	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
4	GO:0043972: histone H3-K23 acetylation	0.00E+00
5	GO:0015739: sialic acid transport	0.00E+00
6	GO:0044154: histone H3-K14 acetylation	0.00E+00
7	GO:0043971: histone H3-K18 acetylation	2.39E-04
8	GO:0019478: D-amino acid catabolic process	2.39E-04
9	GO:0048657: anther wall tapetum cell differentiation	2.39E-04
10	GO:0042547: cell wall modification involved in multidimensional cell growth	2.39E-04
11	GO:0006436: tryptophanyl-tRNA aminoacylation	2.39E-04
12	GO:0000066: mitochondrial ornithine transport	2.39E-04
13	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	2.39E-04
14	GO:0051171: regulation of nitrogen compound metabolic process	2.39E-04
15	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	2.39E-04
16	GO:0006435: threonyl-tRNA aminoacylation	5.29E-04
17	GO:0080005: photosystem stoichiometry adjustment	5.29E-04
18	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	5.29E-04
19	GO:0010275: NAD(P)H dehydrogenase complex assembly	5.29E-04
20	GO:0006013: mannose metabolic process	8.60E-04
21	GO:0001578: microtubule bundle formation	8.60E-04
22	GO:0009800: cinnamic acid biosynthetic process	1.23E-03
23	GO:0010306: rhamnogalacturonan II biosynthetic process	1.23E-03
24	GO:0010255: glucose mediated signaling pathway	1.23E-03
25	GO:0007020: microtubule nucleation	1.64E-03
26	GO:0051322: anaphase	1.64E-03
27	GO:0048868: pollen tube development	2.03E-03
28	GO:0046785: microtubule polymerization	2.09E-03
29	GO:0031365: N-terminal protein amino acid modification	2.09E-03
30	GO:0006559: L-phenylalanine catabolic process	2.57E-03
31	GO:0010190: cytochrome b6f complex assembly	2.57E-03
32	GO:0048827: phyllome development	2.57E-03
33	GO:0007264: small GTPase mediated signal transduction	2.67E-03
34	GO:0034389: lipid particle organization	3.09E-03
35	GO:0048444: floral organ morphogenesis	3.09E-03
36	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.09E-03
37	GO:0009911: positive regulation of flower development	3.61E-03
38	GO:0009610: response to symbiotic fungus	3.64E-03
39	GO:0048528: post-embryonic root development	3.64E-03
40	GO:0006353: DNA-templated transcription, termination	4.23E-03
41	GO:0009704: de-etiolation	4.23E-03
42	GO:0009657: plastid organization	4.84E-03
43	GO:0007389: pattern specification process	4.84E-03
44	GO:0044030: regulation of DNA methylation	4.84E-03
45	GO:0017004: cytochrome complex assembly	4.84E-03
46	GO:0006002: fructose 6-phosphate metabolic process	4.84E-03
47	GO:0022900: electron transport chain	4.84E-03
48	GO:0009827: plant-type cell wall modification	4.84E-03
49	GO:0009451: RNA modification	4.99E-03
50	GO:0019432: triglyceride biosynthetic process	5.48E-03
51	GO:0090305: nucleic acid phosphodiester bond hydrolysis	5.48E-03
52	GO:0000373: Group II intron splicing	5.48E-03
53	GO:0015780: nucleotide-sugar transport	5.48E-03
54	GO:0010380: regulation of chlorophyll biosynthetic process	6.15E-03
55	GO:0008202: steroid metabolic process	6.15E-03
56	GO:0019538: protein metabolic process	6.85E-03
57	GO:0006535: cysteine biosynthetic process from serine	6.85E-03
58	GO:0006415: translational termination	7.58E-03
59	GO:0009750: response to fructose	7.58E-03
60	GO:0010229: inflorescence development	9.11E-03
61	GO:0010020: chloroplast fission	9.92E-03
62	GO:0010540: basipetal auxin transport	9.92E-03
63	GO:0009934: regulation of meristem structural organization	9.92E-03
64	GO:0080188: RNA-directed DNA methylation	1.07E-02
65	GO:0006417: regulation of translation	1.15E-02
66	GO:0006863: purine nucleobase transport	1.16E-02
67	GO:0006071: glycerol metabolic process	1.16E-02
68	GO:0010187: negative regulation of seed germination	1.25E-02
69	GO:0006289: nucleotide-excision repair	1.25E-02
70	GO:0019344: cysteine biosynthetic process	1.25E-02
71	GO:0006418: tRNA aminoacylation for protein translation	1.34E-02
72	GO:0043622: cortical microtubule organization	1.34E-02
73	GO:0010073: meristem maintenance	1.34E-02
74	GO:0051302: regulation of cell division	1.34E-02
75	GO:0009740: gibberellic acid mediated signaling pathway	1.39E-02
76	GO:0035428: hexose transmembrane transport	1.53E-02
77	GO:0009814: defense response, incompatible interaction	1.53E-02
78	GO:0016226: iron-sulfur cluster assembly	1.53E-02
79	GO:0080092: regulation of pollen tube growth	1.53E-02
80	GO:0010584: pollen exine formation	1.72E-02
81	GO:0045489: pectin biosynthetic process	2.03E-02
82	GO:0046323: glucose import	2.03E-02
83	GO:0010268: brassinosteroid homeostasis	2.03E-02
84	GO:0048825: cotyledon development	2.25E-02
85	GO:0009749: response to glucose	2.25E-02
86	GO:0002229: defense response to oomycetes	2.36E-02
87	GO:0006508: proteolysis	2.36E-02
88	GO:0016132: brassinosteroid biosynthetic process	2.36E-02
89	GO:0007623: circadian rhythm	2.56E-02
90	GO:0071281: cellular response to iron ion	2.59E-02
91	GO:0010252: auxin homeostasis	2.71E-02
92	GO:0016125: sterol metabolic process	2.71E-02
93	GO:0009739: response to gibberellin	2.87E-02
94	GO:0000910: cytokinesis	2.95E-02
95	GO:0010468: regulation of gene expression	3.06E-02
96	GO:0016126: sterol biosynthetic process	3.07E-02
97	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.19E-02
98	GO:0010411: xyloglucan metabolic process	3.45E-02
99	GO:0048481: plant ovule development	3.71E-02
100	GO:0030244: cellulose biosynthetic process	3.71E-02
101	GO:0009416: response to light stimulus	3.73E-02
102	GO:0000160: phosphorelay signal transduction system	3.84E-02
103	GO:0009834: plant-type secondary cell wall biogenesis	3.97E-02
104	GO:0007568: aging	4.11E-02
105	GO:0009910: negative regulation of flower development	4.11E-02
106	GO:0009860: pollen tube growth	4.26E-02
107	GO:0009853: photorespiration	4.39E-02
108	GO:0006839: mitochondrial transport	4.81E-02
109	GO:0080167: response to karrikin	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
2	GO:0015136: sialic acid transmembrane transporter activity	0.00E+00
3	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
4	GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity	0.00E+00
5	GO:0005290: L-histidine transmembrane transporter activity	2.39E-04
6	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	2.39E-04
7	GO:0004830: tryptophan-tRNA ligase activity	2.39E-04
8	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	2.39E-04
9	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	2.39E-04
10	GO:0000064: L-ornithine transmembrane transporter activity	5.29E-04
11	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	5.29E-04
12	GO:0004829: threonine-tRNA ligase activity	5.29E-04
13	GO:0050017: L-3-cyanoalanine synthase activity	5.29E-04
14	GO:0019903: protein phosphatase binding	5.29E-04
15	GO:0004047: aminomethyltransferase activity	5.29E-04
16	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	5.29E-04
17	GO:0045548: phenylalanine ammonia-lyase activity	8.60E-04
18	GO:0030267: glyoxylate reductase (NADP) activity	8.60E-04
19	GO:0016805: dipeptidase activity	8.60E-04
20	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	8.60E-04
21	GO:0051537: 2 iron, 2 sulfur cluster binding	1.17E-03
22	GO:0015181: arginine transmembrane transporter activity	1.23E-03
23	GO:0015189: L-lysine transmembrane transporter activity	1.23E-03
24	GO:0000254: C-4 methylsterol oxidase activity	1.23E-03
25	GO:0010385: double-stranded methylated DNA binding	1.64E-03
26	GO:0070628: proteasome binding	1.64E-03
27	GO:0019901: protein kinase binding	2.34E-03
28	GO:0031593: polyubiquitin binding	2.57E-03
29	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.09E-03
30	GO:0004144: diacylglycerol O-acyltransferase activity	3.09E-03
31	GO:0004559: alpha-mannosidase activity	3.09E-03
32	GO:0004124: cysteine synthase activity	3.09E-03
33	GO:0003872: 6-phosphofructokinase activity	3.64E-03
34	GO:0019899: enzyme binding	3.64E-03
35	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.64E-03
36	GO:0008235: metalloexopeptidase activity	3.64E-03
37	GO:0003924: GTPase activity	4.28E-03
38	GO:0005351: sugar:proton symporter activity	4.71E-03
39	GO:0008142: oxysterol binding	4.84E-03
40	GO:0003747: translation release factor activity	5.48E-03
41	GO:0009672: auxin:proton symporter activity	6.15E-03
42	GO:0015020: glucuronosyltransferase activity	6.85E-03
43	GO:0005089: Rho guanyl-nucleotide exchange factor activity	7.58E-03
44	GO:0008327: methyl-CpG binding	7.58E-03
45	GO:0004177: aminopeptidase activity	7.58E-03
46	GO:0043621: protein self-association	8.31E-03
47	GO:0010329: auxin efflux transmembrane transporter activity	9.11E-03
48	GO:0009982: pseudouridine synthase activity	9.11E-03
49	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.92E-03
50	GO:0043130: ubiquitin binding	1.25E-02
51	GO:0005345: purine nucleobase transmembrane transporter activity	1.34E-02
52	GO:0043424: protein histidine kinase binding	1.34E-02
53	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.35E-02
54	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.35E-02
55	GO:0004176: ATP-dependent peptidase activity	1.43E-02
56	GO:0030570: pectate lyase activity	1.62E-02
57	GO:0004812: aminoacyl-tRNA ligase activity	1.82E-02
58	GO:0004402: histone acetyltransferase activity	1.93E-02
59	GO:0001085: RNA polymerase II transcription factor binding	2.03E-02
60	GO:0010181: FMN binding	2.14E-02
61	GO:0005355: glucose transmembrane transporter activity	2.14E-02
62	GO:0015144: carbohydrate transmembrane transporter activity	2.22E-02
63	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.36E-02
64	GO:0004518: nuclease activity	2.47E-02
65	GO:0000156: phosphorelay response regulator activity	2.59E-02
66	GO:0008017: microtubule binding	2.68E-02
67	GO:0003684: damaged DNA binding	2.71E-02
68	GO:0008237: metallopeptidase activity	2.83E-02
69	GO:0016757: transferase activity, transferring glycosyl groups	2.86E-02
70	GO:0008194: UDP-glycosyltransferase activity	2.87E-02
71	GO:0016413: O-acetyltransferase activity	2.95E-02
72	GO:0004806: triglyceride lipase activity	3.45E-02
73	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.45E-02
74	GO:0046982: protein heterodimerization activity	3.89E-02
75	GO:0046872: metal ion binding	3.96E-02
76	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.97E-02
77	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.11E-02
78	GO:0003993: acid phosphatase activity	4.53E-02
79	GO:0042393: histone binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0009507: chloroplast	4.78E-05
3	GO:0010370: perinucleolar chromocenter	2.39E-04
4	GO:0009570: chloroplast stroma	1.18E-03
5	GO:0009531: secondary cell wall	1.23E-03
6	GO:0005945: 6-phosphofructokinase complex	2.09E-03
7	GO:0055035: plastid thylakoid membrane	2.09E-03
8	GO:0072686: mitotic spindle	2.09E-03
9	GO:0010005: cortical microtubule, transverse to long axis	3.09E-03
10	GO:0009707: chloroplast outer membrane	4.70E-03
11	GO:0005811: lipid particle	4.84E-03
12	GO:0005720: nuclear heterochromatin	5.48E-03
13	GO:0005802: trans-Golgi network	6.05E-03
14	GO:0005819: spindle	6.50E-03
15	GO:0016324: apical plasma membrane	6.85E-03
16	GO:0055028: cortical microtubule	6.85E-03
17	GO:0005768: endosome	7.56E-03
18	GO:0005938: cell cortex	9.11E-03
19	GO:0016602: CCAAT-binding factor complex	9.11E-03
20	GO:0009574: preprophase band	9.11E-03
21	GO:0045271: respiratory chain complex I	1.34E-02
22	GO:0009505: plant-type cell wall	1.34E-02
23	GO:0009532: plastid stroma	1.43E-02
24	GO:0005789: endoplasmic reticulum membrane	1.89E-02
25	GO:0005770: late endosome	2.03E-02
26	GO:0030529: intracellular ribonucleoprotein complex	3.07E-02
27	GO:0005667: transcription factor complex	3.32E-02
28	GO:0046658: anchored component of plasma membrane	3.39E-02
29	GO:0005874: microtubule	4.73E-02