co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G31180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
2	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
3	GO:0001778: plasma membrane repair	0.00E+00
4	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
5	GO:0006573: valine metabolic process	0.00E+00
6	GO:0009090: homoserine biosynthetic process	1.77E-05
7	GO:0046900: tetrahydrofolylpolyglutamate metabolic process	1.77E-05
8	GO:0006551: leucine metabolic process	1.77E-05
9	GO:0006432: phenylalanyl-tRNA aminoacylation	4.61E-05
10	GO:0046740: transport of virus in host, cell to cell	4.61E-05
11	GO:0006612: protein targeting to membrane	1.23E-04
12	GO:0009067: aspartate family amino acid biosynthetic process	1.23E-04
13	GO:0032456: endocytic recycling	1.23E-04
14	GO:0042274: ribosomal small subunit biogenesis	1.69E-04
15	GO:0048442: sepal development	1.69E-04
16	GO:0016131: brassinosteroid metabolic process	2.19E-04
17	GO:0009612: response to mechanical stimulus	3.27E-04
18	GO:0010076: maintenance of floral meristem identity	3.27E-04
19	GO:0009082: branched-chain amino acid biosynthetic process	3.27E-04
20	GO:0009099: valine biosynthetic process	3.27E-04
21	GO:0009088: threonine biosynthetic process	3.27E-04
22	GO:0070413: trehalose metabolism in response to stress	4.43E-04
23	GO:0009097: isoleucine biosynthetic process	5.05E-04
24	GO:0032544: plastid translation	5.05E-04
25	GO:0009086: methionine biosynthetic process	6.32E-04
26	GO:0048441: petal development	6.99E-04
27	GO:0009089: lysine biosynthetic process via diaminopimelate	7.68E-04
28	GO:0043085: positive regulation of catalytic activity	7.68E-04
29	GO:0050826: response to freezing	9.08E-04
30	GO:0048440: carpel development	9.82E-04
31	GO:0006541: glutamine metabolic process	9.82E-04
32	GO:0005992: trehalose biosynthetic process	1.21E-03
33	GO:0048443: stamen development	1.63E-03
34	GO:0006662: glycerol ether metabolic process	1.90E-03
35	GO:0009741: response to brassinosteroid	1.90E-03
36	GO:0010268: brassinosteroid homeostasis	1.90E-03
37	GO:0009646: response to absence of light	2.00E-03
38	GO:0016032: viral process	2.29E-03
39	GO:0001666: response to hypoxia	2.80E-03
40	GO:0009615: response to virus	2.80E-03
41	GO:0034599: cellular response to oxidative stress	4.06E-03
42	GO:0006897: endocytosis	4.43E-03
43	GO:0000165: MAPK cascade	5.34E-03
44	GO:0040008: regulation of growth	1.04E-02
45	GO:0009451: RNA modification	1.09E-02
46	GO:0009409: response to cold	1.13E-02
47	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	1.39E-02
48	GO:0042254: ribosome biogenesis	1.48E-02
49	GO:0009793: embryo development ending in seed dormancy	1.93E-02
50	GO:0045454: cell redox homeostasis	1.94E-02
51	GO:0006869: lipid transport	2.07E-02
52	GO:0055114: oxidation-reduction process	2.66E-02
53	GO:0009416: response to light stimulus	3.39E-02
54	GO:0006412: translation	4.34E-02
55	GO:0006414: translational elongation	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
2	GO:0031210: phosphatidylcholine binding	0.00E+00
3	GO:0003984: acetolactate synthase activity	1.77E-05
4	GO:0008395: steroid hydroxylase activity	1.77E-05
5	GO:0008242: omega peptidase activity	1.77E-05
6	GO:0016776: phosphotransferase activity, phosphate group as acceptor	1.77E-05
7	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.77E-05
8	GO:0034722: gamma-glutamyl-peptidase activity	4.61E-05
9	GO:0080041: ADP-ribose pyrophosphohydrolase activity	4.61E-05
10	GO:0004826: phenylalanine-tRNA ligase activity	4.61E-05
11	GO:0004412: homoserine dehydrogenase activity	4.61E-05
12	GO:1901981: phosphatidylinositol phosphate binding	4.61E-05
13	GO:0016597: amino acid binding	1.13E-04
14	GO:0004072: aspartate kinase activity	1.23E-04
15	GO:0000062: fatty-acyl-CoA binding	1.69E-04
16	GO:0004805: trehalose-phosphatase activity	6.99E-04
17	GO:0008047: enzyme activator activity	6.99E-04
18	GO:0000049: tRNA binding	8.38E-04
19	GO:0009982: pseudouridine synthase activity	9.08E-04
20	GO:0047134: protein-disulfide reductase activity	1.72E-03
21	GO:0004791: thioredoxin-disulfide reductase activity	2.00E-03
22	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.39E-03
23	GO:0016791: phosphatase activity	2.49E-03
24	GO:0004721: phosphoprotein phosphatase activity	3.13E-03
25	GO:0003746: translation elongation factor activity	3.94E-03
26	GO:0050661: NADP binding	4.31E-03
27	GO:0015035: protein disulfide oxidoreductase activity	7.49E-03
28	GO:0019843: rRNA binding	8.58E-03
29	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	8.74E-03
30	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	9.39E-03
31	GO:0003723: RNA binding	1.55E-02
32	GO:0003735: structural constituent of ribosome	1.66E-02
33	GO:0004519: endonuclease activity	2.39E-02
34	GO:0008289: lipid binding	2.85E-02
35	GO:0016887: ATPase activity	3.07E-02
36	GO:0003676: nucleic acid binding	3.43E-02
37	GO:0019825: oxygen binding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0005948: acetolactate synthase complex	0.00E+00
2	GO:0032541: cortical endoplasmic reticulum	1.77E-05
3	GO:0000778: condensed nuclear chromosome kinetochore	4.61E-05
4	GO:0009898: cytoplasmic side of plasma membrane	1.69E-04
5	GO:0009501: amyloplast	4.43E-04
6	GO:0009570: chloroplast stroma	5.23E-04
7	GO:0005884: actin filament	7.68E-04
8	GO:0009507: chloroplast	9.25E-04
9	GO:0010008: endosome membrane	6.60E-03
10	GO:0005759: mitochondrial matrix	1.01E-02
11	GO:0022627: cytosolic small ribosomal subunit	1.31E-02
12	GO:0005829: cytosol	2.38E-02
13	GO:0043231: intracellular membrane-bounded organelle	2.41E-02
14	GO:0009579: thylakoid	3.85E-02
15	GO:0005773: vacuole	4.42E-02