GO Enrichment Analysis of Co-expressed Genes with
AT1G29820
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 4 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 5 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 6 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 7 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.72E-06 |
| 8 | GO:0048507: meristem development | 1.22E-05 |
| 9 | GO:2000021: regulation of ion homeostasis | 2.76E-05 |
| 10 | GO:1902458: positive regulation of stomatal opening | 2.76E-05 |
| 11 | GO:0010028: xanthophyll cycle | 2.76E-05 |
| 12 | GO:0006419: alanyl-tRNA aminoacylation | 2.76E-05 |
| 13 | GO:0031426: polycistronic mRNA processing | 2.76E-05 |
| 14 | GO:0043266: regulation of potassium ion transport | 2.76E-05 |
| 15 | GO:0010063: positive regulation of trichoblast fate specification | 2.76E-05 |
| 16 | GO:0000256: allantoin catabolic process | 7.01E-05 |
| 17 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 7.01E-05 |
| 18 | GO:1900871: chloroplast mRNA modification | 7.01E-05 |
| 19 | GO:0090153: regulation of sphingolipid biosynthetic process | 1.23E-04 |
| 20 | GO:0005977: glycogen metabolic process | 1.23E-04 |
| 21 | GO:0010136: ureide catabolic process | 1.23E-04 |
| 22 | GO:2001141: regulation of RNA biosynthetic process | 1.83E-04 |
| 23 | GO:0010071: root meristem specification | 1.83E-04 |
| 24 | GO:0010239: chloroplast mRNA processing | 1.83E-04 |
| 25 | GO:0006145: purine nucleobase catabolic process | 1.83E-04 |
| 26 | GO:0033014: tetrapyrrole biosynthetic process | 1.83E-04 |
| 27 | GO:0009226: nucleotide-sugar biosynthetic process | 1.83E-04 |
| 28 | GO:0010021: amylopectin biosynthetic process | 2.48E-04 |
| 29 | GO:0006661: phosphatidylinositol biosynthetic process | 2.48E-04 |
| 30 | GO:0006021: inositol biosynthetic process | 2.48E-04 |
| 31 | GO:0046855: inositol phosphate dephosphorylation | 3.92E-04 |
| 32 | GO:0006400: tRNA modification | 5.49E-04 |
| 33 | GO:0009395: phospholipid catabolic process | 5.49E-04 |
| 34 | GO:0048437: floral organ development | 5.49E-04 |
| 35 | GO:2000070: regulation of response to water deprivation | 6.32E-04 |
| 36 | GO:0010492: maintenance of shoot apical meristem identity | 6.32E-04 |
| 37 | GO:0032544: plastid translation | 7.18E-04 |
| 38 | GO:0071482: cellular response to light stimulus | 7.18E-04 |
| 39 | GO:0006783: heme biosynthetic process | 8.07E-04 |
| 40 | GO:0000902: cell morphogenesis | 8.07E-04 |
| 41 | GO:0098656: anion transmembrane transport | 8.07E-04 |
| 42 | GO:0006779: porphyrin-containing compound biosynthetic process | 8.99E-04 |
| 43 | GO:0006352: DNA-templated transcription, initiation | 1.09E-03 |
| 44 | GO:0006790: sulfur compound metabolic process | 1.19E-03 |
| 45 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.29E-03 |
| 46 | GO:0010020: chloroplast fission | 1.40E-03 |
| 47 | GO:0046854: phosphatidylinositol phosphorylation | 1.50E-03 |
| 48 | GO:0019853: L-ascorbic acid biosynthetic process | 1.50E-03 |
| 49 | GO:0009658: chloroplast organization | 2.22E-03 |
| 50 | GO:0009306: protein secretion | 2.35E-03 |
| 51 | GO:0042127: regulation of cell proliferation | 2.35E-03 |
| 52 | GO:0048868: pollen tube development | 2.74E-03 |
| 53 | GO:0010305: leaf vascular tissue pattern formation | 2.74E-03 |
| 54 | GO:0019252: starch biosynthetic process | 3.02E-03 |
| 55 | GO:0008654: phospholipid biosynthetic process | 3.02E-03 |
| 56 | GO:0009791: post-embryonic development | 3.02E-03 |
| 57 | GO:0009409: response to cold | 3.41E-03 |
| 58 | GO:0016126: sterol biosynthetic process | 4.06E-03 |
| 59 | GO:0009627: systemic acquired resistance | 4.38E-03 |
| 60 | GO:0015995: chlorophyll biosynthetic process | 4.54E-03 |
| 61 | GO:0048481: plant ovule development | 4.87E-03 |
| 62 | GO:0009637: response to blue light | 5.73E-03 |
| 63 | GO:0010114: response to red light | 6.82E-03 |
| 64 | GO:0009644: response to high light intensity | 7.20E-03 |
| 65 | GO:0042538: hyperosmotic salinity response | 7.99E-03 |
| 66 | GO:0048367: shoot system development | 9.65E-03 |
| 67 | GO:0006396: RNA processing | 1.10E-02 |
| 68 | GO:0009790: embryo development | 1.40E-02 |
| 69 | GO:0006633: fatty acid biosynthetic process | 1.48E-02 |
| 70 | GO:0006413: translational initiation | 1.51E-02 |
| 71 | GO:0009451: RNA modification | 1.61E-02 |
| 72 | GO:0007166: cell surface receptor signaling pathway | 1.74E-02 |
| 73 | GO:0010468: regulation of gene expression | 1.79E-02 |
| 74 | GO:0008380: RNA splicing | 1.79E-02 |
| 75 | GO:0005975: carbohydrate metabolic process | 2.20E-02 |
| 76 | GO:0048366: leaf development | 2.42E-02 |
| 77 | GO:0080167: response to karrikin | 2.51E-02 |
| 78 | GO:0016192: vesicle-mediated transport | 2.61E-02 |
| 79 | GO:0006886: intracellular protein transport | 2.92E-02 |
| 80 | GO:0007165: signal transduction | 3.02E-02 |
| 81 | GO:0016042: lipid catabolic process | 3.25E-02 |
| 82 | GO:0009793: embryo development ending in seed dormancy | 3.35E-02 |
| 83 | GO:0006397: mRNA processing | 3.42E-02 |
| 84 | GO:0006508: proteolysis | 4.43E-02 |
| 85 | GO:0009735: response to cytokinin | 4.68E-02 |
| 86 | GO:0009416: response to light stimulus | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019144: ADP-sugar diphosphatase activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 4 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.76E-05 |
| 5 | GO:0016776: phosphotransferase activity, phosphate group as acceptor | 2.76E-05 |
| 6 | GO:0080042: ADP-glucose pyrophosphohydrolase activity | 2.76E-05 |
| 7 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 2.76E-05 |
| 8 | GO:0004813: alanine-tRNA ligase activity | 2.76E-05 |
| 9 | GO:0004325: ferrochelatase activity | 2.76E-05 |
| 10 | GO:0008158: hedgehog receptor activity | 2.76E-05 |
| 11 | GO:0080041: ADP-ribose pyrophosphohydrolase activity | 7.01E-05 |
| 12 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 7.01E-05 |
| 13 | GO:0052832: inositol monophosphate 3-phosphatase activity | 7.01E-05 |
| 14 | GO:0004312: fatty acid synthase activity | 7.01E-05 |
| 15 | GO:0008934: inositol monophosphate 1-phosphatase activity | 7.01E-05 |
| 16 | GO:0052833: inositol monophosphate 4-phosphatase activity | 7.01E-05 |
| 17 | GO:0019156: isoamylase activity | 7.01E-05 |
| 18 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 1.23E-04 |
| 19 | GO:0004848: ureidoglycolate hydrolase activity | 1.23E-04 |
| 20 | GO:0048027: mRNA 5'-UTR binding | 1.83E-04 |
| 21 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.83E-04 |
| 22 | GO:0001053: plastid sigma factor activity | 2.48E-04 |
| 23 | GO:0004045: aminoacyl-tRNA hydrolase activity | 2.48E-04 |
| 24 | GO:0016987: sigma factor activity | 2.48E-04 |
| 25 | GO:0004556: alpha-amylase activity | 3.92E-04 |
| 26 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.69E-04 |
| 27 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 7.46E-04 |
| 28 | GO:0000049: tRNA binding | 1.19E-03 |
| 29 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.29E-03 |
| 30 | GO:0009982: pseudouridine synthase activity | 1.29E-03 |
| 31 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.40E-03 |
| 32 | GO:0016788: hydrolase activity, acting on ester bonds | 2.26E-03 |
| 33 | GO:0008514: organic anion transmembrane transporter activity | 2.35E-03 |
| 34 | GO:0046872: metal ion binding | 2.97E-03 |
| 35 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 3.75E-03 |
| 36 | GO:0008237: metallopeptidase activity | 3.75E-03 |
| 37 | GO:0016597: amino acid binding | 3.90E-03 |
| 38 | GO:0004721: phosphoprotein phosphatase activity | 4.54E-03 |
| 39 | GO:0004222: metalloendopeptidase activity | 5.21E-03 |
| 40 | GO:0003993: acid phosphatase activity | 5.91E-03 |
| 41 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.40E-03 |
| 42 | GO:0016874: ligase activity | 1.03E-02 |
| 43 | GO:0015144: carbohydrate transmembrane transporter activity | 1.43E-02 |
| 44 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.51E-02 |
| 45 | GO:0005351: sugar:proton symporter activity | 1.56E-02 |
| 46 | GO:0003743: translation initiation factor activity | 1.77E-02 |
| 47 | GO:0042802: identical protein binding | 1.88E-02 |
| 48 | GO:0052689: carboxylic ester hydrolase activity | 2.70E-02 |
| 49 | GO:0003723: RNA binding | 3.12E-02 |
| 50 | GO:0003924: GTPase activity | 3.32E-02 |
| 51 | GO:0004519: endonuclease activity | 3.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 8.71E-11 |
| 3 | GO:0009570: chloroplast stroma | 5.72E-06 |
| 4 | GO:0080085: signal recognition particle, chloroplast targeting | 7.01E-05 |
| 5 | GO:0033281: TAT protein transport complex | 1.23E-04 |
| 6 | GO:0030663: COPI-coated vesicle membrane | 2.48E-04 |
| 7 | GO:0055035: plastid thylakoid membrane | 3.18E-04 |
| 8 | GO:0009536: plastid | 4.90E-04 |
| 9 | GO:0009501: amyloplast | 6.32E-04 |
| 10 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 7.18E-04 |
| 11 | GO:0009941: chloroplast envelope | 8.01E-04 |
| 12 | GO:0042644: chloroplast nucleoid | 8.07E-04 |
| 13 | GO:0009706: chloroplast inner membrane | 8.63E-04 |
| 14 | GO:0030125: clathrin vesicle coat | 9.92E-04 |
| 15 | GO:0009508: plastid chromosome | 1.29E-03 |
| 16 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.50E-03 |
| 17 | GO:0009295: nucleoid | 3.75E-03 |
| 18 | GO:0030529: intracellular ribonucleoprotein complex | 4.06E-03 |
| 19 | GO:0009535: chloroplast thylakoid membrane | 6.44E-03 |
| 20 | GO:0005623: cell | 1.28E-02 |
| 21 | GO:0009705: plant-type vacuole membrane | 1.58E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 1.93E-02 |
| 23 | GO:0005886: plasma membrane | 2.07E-02 |
| 24 | GO:0031969: chloroplast membrane | 2.51E-02 |
| 25 | GO:0043231: intracellular membrane-bounded organelle | 3.56E-02 |