co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G29300

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090400: stress-induced premature senescence	0.00E+00
2	GO:0048034: heme O biosynthetic process	0.00E+00
3	GO:1904250: positive regulation of age-related resistance	0.00E+00
4	GO:0010398: xylogalacturonan metabolic process	0.00E+00
5	GO:0016102: diterpenoid biosynthetic process	0.00E+00
6	GO:0072722: response to amitrole	0.00E+00
7	GO:0046686: response to cadmium ion	1.52E-05
8	GO:0042964: thioredoxin reduction	5.94E-05
9	GO:0006680: glucosylceramide catabolic process	5.94E-05
10	GO:0015709: thiosulfate transport	1.44E-04
11	GO:0071422: succinate transmembrane transport	1.44E-04
12	GO:0006591: ornithine metabolic process	2.46E-04
13	GO:0006556: S-adenosylmethionine biosynthetic process	2.46E-04
14	GO:0040009: regulation of growth rate	2.46E-04
15	GO:0010272: response to silver ion	2.46E-04
16	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	2.46E-04
17	GO:0055114: oxidation-reduction process	3.02E-04
18	GO:0015729: oxaloacetate transport	3.57E-04
19	GO:0010150: leaf senescence	4.44E-04
20	GO:1902584: positive regulation of response to water deprivation	4.78E-04
21	GO:0010252: auxin homeostasis	4.83E-04
22	GO:0009615: response to virus	5.73E-04
23	GO:0071423: malate transmembrane transport	6.05E-04
24	GO:0000304: response to singlet oxygen	6.05E-04
25	GO:0006564: L-serine biosynthetic process	6.05E-04
26	GO:0045927: positive regulation of growth	6.05E-04
27	GO:0009651: response to salt stress	6.39E-04
28	GO:0035435: phosphate ion transmembrane transport	7.40E-04
29	GO:0009407: toxin catabolic process	8.13E-04
30	GO:0034389: lipid particle organization	8.82E-04
31	GO:0009082: branched-chain amino acid biosynthetic process	8.82E-04
32	GO:0009099: valine biosynthetic process	8.82E-04
33	GO:0009554: megasporogenesis	8.82E-04
34	GO:0080113: regulation of seed growth	8.82E-04
35	GO:0071669: plant-type cell wall organization or biogenesis	1.03E-03
36	GO:0008272: sulfate transport	1.03E-03
37	GO:0050829: defense response to Gram-negative bacterium	1.03E-03
38	GO:1900057: positive regulation of leaf senescence	1.03E-03
39	GO:1902074: response to salt	1.03E-03
40	GO:0080027: response to herbivore	1.03E-03
41	GO:0080186: developmental vegetative growth	1.03E-03
42	GO:0043068: positive regulation of programmed cell death	1.18E-03
43	GO:0006102: isocitrate metabolic process	1.18E-03
44	GO:0009636: response to toxic substance	1.32E-03
45	GO:0007186: G-protein coupled receptor signaling pathway	1.35E-03
46	GO:0010497: plasmodesmata-mediated intercellular transport	1.35E-03
47	GO:0019430: removal of superoxide radicals	1.35E-03
48	GO:0009097: isoleucine biosynthetic process	1.35E-03
49	GO:0009821: alkaloid biosynthetic process	1.52E-03
50	GO:0006783: heme biosynthetic process	1.52E-03
51	GO:0006754: ATP biosynthetic process	1.52E-03
52	GO:0009751: response to salicylic acid	1.59E-03
53	GO:2000280: regulation of root development	1.69E-03
54	GO:0009098: leucine biosynthetic process	1.69E-03
55	GO:0009753: response to jasmonic acid	1.77E-03
56	GO:0006032: chitin catabolic process	1.88E-03
57	GO:0009688: abscisic acid biosynthetic process	1.88E-03
58	GO:0009733: response to auxin	1.93E-03
59	GO:0009620: response to fungus	2.03E-03
60	GO:0000272: polysaccharide catabolic process	2.07E-03
61	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	2.27E-03
62	GO:0006807: nitrogen compound metabolic process	2.47E-03
63	GO:0055046: microgametogenesis	2.47E-03
64	GO:0009058: biosynthetic process	2.91E-03
65	GO:0000162: tryptophan biosynthetic process	3.11E-03
66	GO:0045333: cellular respiration	3.34E-03
67	GO:0006874: cellular calcium ion homeostasis	3.57E-03
68	GO:0016998: cell wall macromolecule catabolic process	3.81E-03
69	GO:0019915: lipid storage	3.81E-03
70	GO:0006730: one-carbon metabolic process	4.05E-03
71	GO:0030245: cellulose catabolic process	4.05E-03
72	GO:0009693: ethylene biosynthetic process	4.30E-03
73	GO:0009617: response to bacterium	4.53E-03
74	GO:0009561: megagametogenesis	4.55E-03
75	GO:0042147: retrograde transport, endosome to Golgi	4.81E-03
76	GO:0015991: ATP hydrolysis coupled proton transport	5.07E-03
77	GO:0042631: cellular response to water deprivation	5.07E-03
78	GO:0045489: pectin biosynthetic process	5.34E-03
79	GO:0009851: auxin biosynthetic process	5.89E-03
80	GO:0006891: intra-Golgi vesicle-mediated transport	6.17E-03
81	GO:0071281: cellular response to iron ion	6.75E-03
82	GO:0009723: response to ethylene	6.78E-03
83	GO:0006464: cellular protein modification process	7.05E-03
84	GO:0019760: glucosinolate metabolic process	7.05E-03
85	GO:0006979: response to oxidative stress	8.23E-03
86	GO:0010029: regulation of seed germination	8.28E-03
87	GO:0009627: systemic acquired resistance	8.60E-03
88	GO:0006888: ER to Golgi vesicle-mediated transport	8.92E-03
89	GO:0016049: cell growth	9.25E-03
90	GO:0010311: lateral root formation	9.93E-03
91	GO:0048527: lateral root development	1.06E-02
92	GO:0010043: response to zinc ion	1.06E-02
93	GO:0015031: protein transport	1.11E-02
94	GO:0045087: innate immune response	1.13E-02
95	GO:0006099: tricarboxylic acid cycle	1.17E-02
96	GO:0006839: mitochondrial transport	1.24E-02
97	GO:0042542: response to hydrogen peroxide	1.32E-02
98	GO:0009926: auxin polar transport	1.35E-02
99	GO:0000209: protein polyubiquitination	1.39E-02
100	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.55E-02
101	GO:0009846: pollen germination	1.59E-02
102	GO:0051603: proteolysis involved in cellular protein catabolic process	1.71E-02
103	GO:0048316: seed development	1.93E-02
104	GO:0009611: response to wounding	1.95E-02
105	GO:0042545: cell wall modification	2.10E-02
106	GO:0051726: regulation of cell cycle	2.24E-02
107	GO:0042744: hydrogen peroxide catabolic process	2.77E-02
108	GO:0045490: pectin catabolic process	3.17E-02
109	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.44E-02
110	GO:0010468: regulation of gene expression	3.60E-02
111	GO:0071555: cell wall organization	3.86E-02
112	GO:0009860: pollen tube growth	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0080013: (E,E)-geranyllinalool synthase activity	0.00E+00
2	GO:0008495: protoheme IX farnesyltransferase activity	0.00E+00
3	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
4	GO:0070401: NADP+ binding	5.94E-05
5	GO:0004348: glucosylceramidase activity	5.94E-05
6	GO:0016229: steroid dehydrogenase activity	5.94E-05
7	GO:0004425: indole-3-glycerol-phosphate synthase activity	5.94E-05
8	GO:0015117: thiosulfate transmembrane transporter activity	1.44E-04
9	GO:1901677: phosphate transmembrane transporter activity	1.44E-04
10	GO:0004617: phosphoglycerate dehydrogenase activity	1.44E-04
11	GO:0015141: succinate transmembrane transporter activity	2.46E-04
12	GO:0004478: methionine adenosyltransferase activity	2.46E-04
13	GO:0005310: dicarboxylic acid transmembrane transporter activity	2.46E-04
14	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.57E-04
15	GO:0015131: oxaloacetate transmembrane transporter activity	3.57E-04
16	GO:0016656: monodehydroascorbate reductase (NADH) activity	3.57E-04
17	GO:0052656: L-isoleucine transaminase activity	3.57E-04
18	GO:0052654: L-leucine transaminase activity	3.57E-04
19	GO:0017077: oxidative phosphorylation uncoupler activity	3.57E-04
20	GO:0052655: L-valine transaminase activity	3.57E-04
21	GO:0004084: branched-chain-amino-acid transaminase activity	4.78E-04
22	GO:0004930: G-protein coupled receptor activity	4.78E-04
23	GO:0004031: aldehyde oxidase activity	4.78E-04
24	GO:0050302: indole-3-acetaldehyde oxidase activity	4.78E-04
25	GO:0010279: indole-3-acetic acid amido synthetase activity	4.78E-04
26	GO:0004659: prenyltransferase activity	4.78E-04
27	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	7.40E-04
28	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	7.40E-04
29	GO:0035252: UDP-xylosyltransferase activity	7.40E-04
30	GO:0050660: flavin adenine dinucleotide binding	9.17E-04
31	GO:0015140: malate transmembrane transporter activity	1.03E-03
32	GO:0043295: glutathione binding	1.03E-03
33	GO:0004364: glutathione transferase activity	1.13E-03
34	GO:0004033: aldo-keto reductase (NADP) activity	1.18E-03
35	GO:0004311: farnesyltranstransferase activity	1.18E-03
36	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.52E-03
37	GO:0009672: auxin:proton symporter activity	1.69E-03
38	GO:0016844: strictosidine synthase activity	1.69E-03
39	GO:0004568: chitinase activity	1.88E-03
40	GO:0015116: sulfate transmembrane transporter activity	2.27E-03
41	GO:0010329: auxin efflux transmembrane transporter activity	2.47E-03
42	GO:0016887: ATPase activity	2.81E-03
43	GO:0005217: intracellular ligand-gated ion channel activity	2.89E-03
44	GO:0008061: chitin binding	2.89E-03
45	GO:0004970: ionotropic glutamate receptor activity	2.89E-03
46	GO:0010333: terpene synthase activity	3.81E-03
47	GO:0008810: cellulase activity	4.30E-03
48	GO:0008080: N-acetyltransferase activity	5.34E-03
49	GO:0004791: thioredoxin-disulfide reductase activity	5.61E-03
50	GO:0000287: magnesium ion binding	5.75E-03
51	GO:0004601: peroxidase activity	5.86E-03
52	GO:0016597: amino acid binding	7.65E-03
53	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	9.59E-03
54	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.06E-02
55	GO:0030145: manganese ion binding	1.06E-02
56	GO:0003924: GTPase activity	1.07E-02
57	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.13E-02
58	GO:0003746: translation elongation factor activity	1.13E-02
59	GO:0009055: electron carrier activity	1.15E-02
60	GO:0051537: 2 iron, 2 sulfur cluster binding	1.43E-02
61	GO:0051287: NAD binding	1.55E-02
62	GO:0016298: lipase activity	1.71E-02
63	GO:0045330: aspartyl esterase activity	1.80E-02
64	GO:0045735: nutrient reservoir activity	1.88E-02
65	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.93E-02
66	GO:0030599: pectinesterase activity	2.06E-02
67	GO:0030170: pyridoxal phosphate binding	2.72E-02
68	GO:0046910: pectinesterase inhibitor activity	3.02E-02
69	GO:0015297: antiporter activity	3.07E-02
70	GO:0005525: GTP binding	3.14E-02
71	GO:0005506: iron ion binding	3.80E-02
72	GO:0044212: transcription regulatory region DNA binding	3.86E-02
73	GO:0003824: catalytic activity	4.24E-02

Rank	GO Term	Adjusted P value
1	GO:0005811: lipid particle	1.35E-03
2	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.55E-03
3	GO:0005886: plasma membrane	5.65E-03
4	GO:0016592: mediator complex	6.46E-03
5	GO:0071944: cell periphery	6.75E-03
6	GO:0005783: endoplasmic reticulum	9.30E-03
7	GO:0009707: chloroplast outer membrane	9.59E-03
8	GO:0005743: mitochondrial inner membrane	9.98E-03
9	GO:0016021: integral component of membrane	1.11E-02
10	GO:0000139: Golgi membrane	1.20E-02
11	GO:0005618: cell wall	1.30E-02
12	GO:0005829: cytosol	1.33E-02
13	GO:0005794: Golgi apparatus	1.70E-02
14	GO:0016020: membrane	2.49E-02
15	GO:0009570: chloroplast stroma	2.76E-02
16	GO:0005759: mitochondrial matrix	2.97E-02
17	GO:0005774: vacuolar membrane	3.89E-02
18	GO:0009505: plant-type cell wall	4.83E-02