co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G29060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1902009: positive regulation of toxin transport	0.00E+00
2	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
3	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
4	GO:0010401: pectic galactan metabolic process	0.00E+00
5	GO:0030150: protein import into mitochondrial matrix	5.61E-07
6	GO:0044376: RNA polymerase II complex import to nucleus	2.88E-05
7	GO:0016337: single organismal cell-cell adhesion	2.88E-05
8	GO:1990022: RNA polymerase III complex localization to nucleus	2.88E-05
9	GO:0015012: heparan sulfate proteoglycan biosynthetic process	7.28E-05
10	GO:0006024: glycosaminoglycan biosynthetic process	7.28E-05
11	GO:0052541: plant-type cell wall cellulose metabolic process	7.28E-05
12	GO:0009410: response to xenobiotic stimulus	1.27E-04
13	GO:0006457: protein folding	1.88E-04
14	GO:0055070: copper ion homeostasis	1.89E-04
15	GO:0072334: UDP-galactose transmembrane transport	1.89E-04
16	GO:0006621: protein retention in ER lumen	2.57E-04
17	GO:0006665: sphingolipid metabolic process	3.30E-04
18	GO:1900425: negative regulation of defense response to bacterium	4.06E-04
19	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.86E-04
20	GO:0006333: chromatin assembly or disassembly	5.68E-04
21	GO:0010044: response to aluminum ion	5.68E-04
22	GO:0006486: protein glycosylation	6.49E-04
23	GO:0016559: peroxisome fission	6.55E-04
24	GO:0030968: endoplasmic reticulum unfolded protein response	7.44E-04
25	GO:0090332: stomatal closure	9.29E-04
26	GO:0009086: methionine biosynthetic process	9.29E-04
27	GO:0000266: mitochondrial fission	1.23E-03
28	GO:2000012: regulation of auxin polar transport	1.34E-03
29	GO:0002237: response to molecule of bacterial origin	1.45E-03
30	GO:0006289: nucleotide-excision repair	1.79E-03
31	GO:0009863: salicylic acid mediated signaling pathway	1.79E-03
32	GO:0006334: nucleosome assembly	2.04E-03
33	GO:0009814: defense response, incompatible interaction	2.17E-03
34	GO:0031348: negative regulation of defense response	2.17E-03
35	GO:0009411: response to UV	2.30E-03
36	GO:0010087: phloem or xylem histogenesis	2.70E-03
37	GO:0016192: vesicle-mediated transport	3.04E-03
38	GO:0015031: protein transport	3.37E-03
39	GO:0008219: cell death	5.05E-03
40	GO:0048767: root hair elongation	5.22E-03
41	GO:0000724: double-strand break repair via homologous recombination	5.76E-03
42	GO:0010114: response to red light	7.08E-03
43	GO:0010224: response to UV-B	8.92E-03
44	GO:0009553: embryo sac development	1.09E-02
45	GO:0009790: embryo development	1.46E-02
46	GO:0006413: translational initiation	1.56E-02
47	GO:0007275: multicellular organism development	3.01E-02
48	GO:0006886: intracellular protein transport	3.04E-02
49	GO:0032259: methylation	3.34E-02
50	GO:0009408: response to heat	3.45E-02
51	GO:0009873: ethylene-activated signaling pathway	4.13E-02
52	GO:0009734: auxin-activated signaling pathway	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0005046: KDEL sequence binding	0.00E+00
2	GO:0051082: unfolded protein binding	1.54E-06
3	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.88E-05
4	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	2.88E-05
5	GO:0000774: adenyl-nucleotide exchange factor activity	7.28E-05
6	GO:0030527: structural constituent of chromatin	1.89E-04
7	GO:0005460: UDP-glucose transmembrane transporter activity	1.89E-04
8	GO:0046923: ER retention sequence binding	2.57E-04
9	GO:0005459: UDP-galactose transmembrane transporter activity	3.30E-04
10	GO:0008320: protein transmembrane transporter activity	5.68E-04
11	GO:0008417: fucosyltransferase activity	8.35E-04
12	GO:0031072: heat shock protein binding	1.34E-03
13	GO:0015266: protein channel activity	1.34E-03
14	GO:0051087: chaperone binding	1.92E-03
15	GO:0035251: UDP-glucosyltransferase activity	2.04E-03
16	GO:0003682: chromatin binding	2.47E-03
17	GO:0004872: receptor activity	3.13E-03
18	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.05E-03
19	GO:0004222: metalloendopeptidase activity	5.40E-03
20	GO:0003743: translation initiation factor activity	1.83E-02
21	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.95E-02
22	GO:0042802: identical protein binding	1.95E-02
23	GO:0008168: methyltransferase activity	2.18E-02
24	GO:0042803: protein homodimerization activity	3.07E-02
25	GO:0003924: GTPase activity	3.45E-02

Rank	GO Term	Adjusted P value
1	GO:0005801: cis-Golgi network	4.23E-06
2	GO:0001405: presequence translocase-associated import motor	2.88E-05
3	GO:0030134: ER to Golgi transport vesicle	7.28E-05
4	GO:0005744: mitochondrial inner membrane presequence translocase complex	9.47E-05
5	GO:0005783: endoplasmic reticulum	3.99E-04
6	GO:0005743: mitochondrial inner membrane	4.63E-04
7	GO:0030173: integral component of Golgi membrane	4.86E-04
8	GO:0031305: integral component of mitochondrial inner membrane	6.55E-04
9	GO:0005739: mitochondrion	6.66E-04
10	GO:0030176: integral component of endoplasmic reticulum membrane	1.56E-03
11	GO:0005741: mitochondrial outer membrane	2.04E-03
12	GO:0000785: chromatin	3.43E-03
13	GO:0032580: Golgi cisterna membrane	3.73E-03
14	GO:0005778: peroxisomal membrane	3.89E-03
15	GO:0005789: endoplasmic reticulum membrane	4.25E-03
16	GO:0005788: endoplasmic reticulum lumen	4.37E-03
17	GO:0015934: large ribosomal subunit	5.58E-03
18	GO:0000325: plant-type vacuole	5.58E-03
19	GO:0005737: cytoplasm	9.71E-03
20	GO:0005774: vacuolar membrane	1.20E-02
21	GO:0005802: trans-Golgi network	1.20E-02
22	GO:0005623: cell	1.33E-02
23	GO:0005768: endosome	1.37E-02
24	GO:0005759: mitochondrial matrix	1.54E-02
25	GO:0005874: microtubule	2.55E-02
26	GO:0022625: cytosolic large ribosomal subunit	2.71E-02
27	GO:0005794: Golgi apparatus	3.02E-02
28	GO:0043231: intracellular membrane-bounded organelle	3.70E-02
29	GO:0016021: integral component of membrane	4.76E-02