GO Enrichment Analysis of Co-expressed Genes with
AT1G27480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0098586: cellular response to virus | 0.00E+00 |
| 4 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 5 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 6 | GO:0071482: cellular response to light stimulus | 1.61E-06 |
| 7 | GO:0006352: DNA-templated transcription, initiation | 5.46E-06 |
| 8 | GO:2001141: regulation of RNA biosynthetic process | 8.07E-06 |
| 9 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.48E-05 |
| 10 | GO:0000481: maturation of 5S rRNA | 1.35E-04 |
| 11 | GO:0043087: regulation of GTPase activity | 1.35E-04 |
| 12 | GO:0034337: RNA folding | 1.35E-04 |
| 13 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.35E-04 |
| 14 | GO:0015969: guanosine tetraphosphate metabolic process | 1.35E-04 |
| 15 | GO:0000256: allantoin catabolic process | 3.11E-04 |
| 16 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.11E-04 |
| 17 | GO:0046741: transport of virus in host, tissue to tissue | 3.11E-04 |
| 18 | GO:0090351: seedling development | 3.91E-04 |
| 19 | GO:0009658: chloroplast organization | 5.10E-04 |
| 20 | GO:0006696: ergosterol biosynthetic process | 5.13E-04 |
| 21 | GO:0005977: glycogen metabolic process | 5.13E-04 |
| 22 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 5.13E-04 |
| 23 | GO:0010136: ureide catabolic process | 5.13E-04 |
| 24 | GO:0006730: one-carbon metabolic process | 6.38E-04 |
| 25 | GO:0043572: plastid fission | 7.34E-04 |
| 26 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.34E-04 |
| 27 | GO:0006145: purine nucleobase catabolic process | 7.34E-04 |
| 28 | GO:0009226: nucleotide-sugar biosynthetic process | 7.34E-04 |
| 29 | GO:0071483: cellular response to blue light | 9.73E-04 |
| 30 | GO:0010021: amylopectin biosynthetic process | 9.73E-04 |
| 31 | GO:0051322: anaphase | 9.73E-04 |
| 32 | GO:0006661: phosphatidylinositol biosynthetic process | 9.73E-04 |
| 33 | GO:0031122: cytoplasmic microtubule organization | 9.73E-04 |
| 34 | GO:0007059: chromosome segregation | 1.01E-03 |
| 35 | GO:0009107: lipoate biosynthetic process | 1.23E-03 |
| 36 | GO:0080110: sporopollenin biosynthetic process | 1.23E-03 |
| 37 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.51E-03 |
| 38 | GO:0010190: cytochrome b6f complex assembly | 1.51E-03 |
| 39 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.51E-03 |
| 40 | GO:0009612: response to mechanical stimulus | 1.81E-03 |
| 41 | GO:0009645: response to low light intensity stimulus | 2.12E-03 |
| 42 | GO:0006400: tRNA modification | 2.12E-03 |
| 43 | GO:0009395: phospholipid catabolic process | 2.12E-03 |
| 44 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.12E-03 |
| 45 | GO:0006605: protein targeting | 2.46E-03 |
| 46 | GO:0032508: DNA duplex unwinding | 2.46E-03 |
| 47 | GO:0010492: maintenance of shoot apical meristem identity | 2.46E-03 |
| 48 | GO:0042255: ribosome assembly | 2.46E-03 |
| 49 | GO:0006353: DNA-templated transcription, termination | 2.46E-03 |
| 50 | GO:0032544: plastid translation | 2.81E-03 |
| 51 | GO:0017004: cytochrome complex assembly | 2.81E-03 |
| 52 | GO:0009793: embryo development ending in seed dormancy | 2.84E-03 |
| 53 | GO:0006754: ATP biosynthetic process | 3.17E-03 |
| 54 | GO:0000373: Group II intron splicing | 3.17E-03 |
| 55 | GO:0048507: meristem development | 3.17E-03 |
| 56 | GO:0009821: alkaloid biosynthetic process | 3.17E-03 |
| 57 | GO:0010206: photosystem II repair | 3.17E-03 |
| 58 | GO:0042546: cell wall biogenesis | 3.60E-03 |
| 59 | GO:0006259: DNA metabolic process | 3.95E-03 |
| 60 | GO:0019538: protein metabolic process | 3.95E-03 |
| 61 | GO:0009684: indoleacetic acid biosynthetic process | 4.36E-03 |
| 62 | GO:0006265: DNA topological change | 4.36E-03 |
| 63 | GO:0045037: protein import into chloroplast stroma | 4.79E-03 |
| 64 | GO:0009767: photosynthetic electron transport chain | 5.22E-03 |
| 65 | GO:0006096: glycolytic process | 5.50E-03 |
| 66 | GO:0010020: chloroplast fission | 5.68E-03 |
| 67 | GO:0006833: water transport | 6.62E-03 |
| 68 | GO:0051302: regulation of cell division | 7.62E-03 |
| 69 | GO:0010431: seed maturation | 8.14E-03 |
| 70 | GO:0071555: cell wall organization | 8.80E-03 |
| 71 | GO:0009306: protein secretion | 9.77E-03 |
| 72 | GO:0010584: pollen exine formation | 9.77E-03 |
| 73 | GO:0019722: calcium-mediated signaling | 9.77E-03 |
| 74 | GO:0016117: carotenoid biosynthetic process | 1.03E-02 |
| 75 | GO:0008033: tRNA processing | 1.09E-02 |
| 76 | GO:0034220: ion transmembrane transport | 1.09E-02 |
| 77 | GO:0048868: pollen tube development | 1.15E-02 |
| 78 | GO:0010268: brassinosteroid homeostasis | 1.15E-02 |
| 79 | GO:0045489: pectin biosynthetic process | 1.15E-02 |
| 80 | GO:0007018: microtubule-based movement | 1.21E-02 |
| 81 | GO:0019252: starch biosynthetic process | 1.27E-02 |
| 82 | GO:0008654: phospholipid biosynthetic process | 1.27E-02 |
| 83 | GO:0000302: response to reactive oxygen species | 1.34E-02 |
| 84 | GO:0016132: brassinosteroid biosynthetic process | 1.34E-02 |
| 85 | GO:0032502: developmental process | 1.40E-02 |
| 86 | GO:0010583: response to cyclopentenone | 1.40E-02 |
| 87 | GO:0016032: viral process | 1.40E-02 |
| 88 | GO:0016125: sterol metabolic process | 1.53E-02 |
| 89 | GO:0007267: cell-cell signaling | 1.60E-02 |
| 90 | GO:0000910: cytokinesis | 1.66E-02 |
| 91 | GO:0010027: thylakoid membrane organization | 1.73E-02 |
| 92 | GO:0016126: sterol biosynthetic process | 1.73E-02 |
| 93 | GO:0010411: xyloglucan metabolic process | 1.95E-02 |
| 94 | GO:0016311: dephosphorylation | 2.02E-02 |
| 95 | GO:0009637: response to blue light | 2.48E-02 |
| 96 | GO:0009853: photorespiration | 2.48E-02 |
| 97 | GO:0009737: response to abscisic acid | 2.73E-02 |
| 98 | GO:0010114: response to red light | 2.97E-02 |
| 99 | GO:0009644: response to high light intensity | 3.14E-02 |
| 100 | GO:0006629: lipid metabolic process | 3.26E-02 |
| 101 | GO:0042538: hyperosmotic salinity response | 3.49E-02 |
| 102 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 2 | GO:0005048: signal sequence binding | 0.00E+00 |
| 3 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 4 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 6 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 7 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 8 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 9 | GO:0001053: plastid sigma factor activity | 5.45E-08 |
| 10 | GO:0016987: sigma factor activity | 5.45E-08 |
| 11 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 9.18E-07 |
| 12 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 1.35E-04 |
| 13 | GO:0051996: squalene synthase activity | 1.35E-04 |
| 14 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.35E-04 |
| 15 | GO:0008568: microtubule-severing ATPase activity | 1.35E-04 |
| 16 | GO:0008728: GTP diphosphokinase activity | 3.11E-04 |
| 17 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 3.11E-04 |
| 18 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.11E-04 |
| 19 | GO:0019156: isoamylase activity | 3.11E-04 |
| 20 | GO:0004802: transketolase activity | 3.11E-04 |
| 21 | GO:0016992: lipoate synthase activity | 5.13E-04 |
| 22 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.74E-04 |
| 23 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 7.34E-04 |
| 24 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.73E-04 |
| 25 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 9.73E-04 |
| 26 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 9.73E-04 |
| 27 | GO:0048038: quinone binding | 1.15E-03 |
| 28 | GO:0004040: amidase activity | 1.23E-03 |
| 29 | GO:0004556: alpha-amylase activity | 1.51E-03 |
| 30 | GO:0043022: ribosome binding | 2.46E-03 |
| 31 | GO:0008312: 7S RNA binding | 2.46E-03 |
| 32 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.81E-03 |
| 33 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 3.17E-03 |
| 34 | GO:0030955: potassium ion binding | 3.55E-03 |
| 35 | GO:0016844: strictosidine synthase activity | 3.55E-03 |
| 36 | GO:0004743: pyruvate kinase activity | 3.55E-03 |
| 37 | GO:0016491: oxidoreductase activity | 3.59E-03 |
| 38 | GO:0008081: phosphoric diester hydrolase activity | 5.22E-03 |
| 39 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.68E-03 |
| 40 | GO:0005525: GTP binding | 6.42E-03 |
| 41 | GO:0003727: single-stranded RNA binding | 9.77E-03 |
| 42 | GO:0003824: catalytic activity | 1.01E-02 |
| 43 | GO:0008080: N-acetyltransferase activity | 1.15E-02 |
| 44 | GO:0016887: ATPase activity | 1.15E-02 |
| 45 | GO:0008017: microtubule binding | 1.20E-02 |
| 46 | GO:0050662: coenzyme binding | 1.21E-02 |
| 47 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.34E-02 |
| 48 | GO:0003729: mRNA binding | 1.60E-02 |
| 49 | GO:0015250: water channel activity | 1.73E-02 |
| 50 | GO:0016788: hydrolase activity, acting on ester bonds | 1.81E-02 |
| 51 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.94E-02 |
| 52 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.95E-02 |
| 53 | GO:0008236: serine-type peptidase activity | 2.02E-02 |
| 54 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.09E-02 |
| 55 | GO:0005096: GTPase activator activity | 2.17E-02 |
| 56 | GO:0003993: acid phosphatase activity | 2.56E-02 |
| 57 | GO:0004871: signal transducer activity | 2.77E-02 |
| 58 | GO:0004185: serine-type carboxypeptidase activity | 2.97E-02 |
| 59 | GO:0035091: phosphatidylinositol binding | 3.14E-02 |
| 60 | GO:0003924: GTPase activity | 3.26E-02 |
| 61 | GO:0003690: double-stranded DNA binding | 3.76E-02 |
| 62 | GO:0003777: microtubule motor activity | 3.95E-02 |
| 63 | GO:0004650: polygalacturonase activity | 4.42E-02 |
| 64 | GO:0016874: ligase activity | 4.52E-02 |
| 65 | GO:0016746: transferase activity, transferring acyl groups | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.47E-17 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 6.75E-10 |
| 4 | GO:0080085: signal recognition particle, chloroplast targeting | 9.18E-07 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.29E-06 |
| 6 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.14E-04 |
| 7 | GO:0009570: chloroplast stroma | 3.01E-04 |
| 8 | GO:0009574: preprophase band | 3.08E-04 |
| 9 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 9.73E-04 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 1.18E-03 |
| 11 | GO:0009512: cytochrome b6f complex | 1.23E-03 |
| 12 | GO:0046658: anchored component of plasma membrane | 2.51E-03 |
| 13 | GO:0009579: thylakoid | 3.96E-03 |
| 14 | GO:0000311: plastid large ribosomal subunit | 4.79E-03 |
| 15 | GO:0032040: small-subunit processome | 4.79E-03 |
| 16 | GO:0030176: integral component of endoplasmic reticulum membrane | 6.14E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 7.62E-03 |
| 18 | GO:0042651: thylakoid membrane | 7.62E-03 |
| 19 | GO:0005623: cell | 8.51E-03 |
| 20 | GO:0005871: kinesin complex | 1.03E-02 |
| 21 | GO:0009536: plastid | 1.20E-02 |
| 22 | GO:0019898: extrinsic component of membrane | 1.27E-02 |
| 23 | GO:0009295: nucleoid | 1.60E-02 |
| 24 | GO:0030529: intracellular ribonucleoprotein complex | 1.73E-02 |
| 25 | GO:0019005: SCF ubiquitin ligase complex | 2.09E-02 |
| 26 | GO:0009707: chloroplast outer membrane | 2.09E-02 |
| 27 | GO:0005874: microtubule | 2.13E-02 |
| 28 | GO:0015934: large ribosomal subunit | 2.32E-02 |
| 29 | GO:0031225: anchored component of membrane | 2.39E-02 |
| 30 | GO:0031977: thylakoid lumen | 2.80E-02 |
| 31 | GO:0009941: chloroplast envelope | 3.21E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 4.71E-02 |