co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G27350

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052386: cell wall thickening	0.00E+00
2	GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress	0.00E+00
3	GO:0010401: pectic galactan metabolic process	0.00E+00
4	GO:0080149: sucrose induced translational repression	0.00E+00
5	GO:2000068: regulation of defense response to insect	0.00E+00
6	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
7	GO:0030968: endoplasmic reticulum unfolded protein response	6.83E-07
8	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.25E-05
9	GO:1990022: RNA polymerase III complex localization to nucleus	9.50E-05
10	GO:0043182: vacuolar sequestering of sodium ion	9.50E-05
11	GO:0044376: RNA polymerase II complex import to nucleus	9.50E-05
12	GO:0051090: regulation of sequence-specific DNA binding transcription factor activity	9.50E-05
13	GO:0016337: single organismal cell-cell adhesion	9.50E-05
14	GO:0000077: DNA damage checkpoint	9.50E-05
15	GO:0042350: GDP-L-fucose biosynthetic process	9.50E-05
16	GO:1990641: response to iron ion starvation	9.50E-05
17	GO:0040020: regulation of meiotic nuclear division	2.24E-04
18	GO:0006101: citrate metabolic process	2.24E-04
19	GO:0015012: heparan sulfate proteoglycan biosynthetic process	2.24E-04
20	GO:0006568: tryptophan metabolic process	2.24E-04
21	GO:0006024: glycosaminoglycan biosynthetic process	2.24E-04
22	GO:0052541: plant-type cell wall cellulose metabolic process	2.24E-04
23	GO:0042853: L-alanine catabolic process	2.24E-04
24	GO:0016192: vesicle-mediated transport	3.62E-04
25	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	3.73E-04
26	GO:0032504: multicellular organism reproduction	3.73E-04
27	GO:0009410: response to xenobiotic stimulus	3.73E-04
28	GO:0006457: protein folding	4.29E-04
29	GO:0072334: UDP-galactose transmembrane transport	5.37E-04
30	GO:0009963: positive regulation of flavonoid biosynthetic process	5.37E-04
31	GO:0009226: nucleotide-sugar biosynthetic process	5.37E-04
32	GO:0055070: copper ion homeostasis	5.37E-04
33	GO:0006621: protein retention in ER lumen	7.14E-04
34	GO:1901002: positive regulation of response to salt stress	7.14E-04
35	GO:1902584: positive regulation of response to water deprivation	7.14E-04
36	GO:0007275: multicellular organism development	7.84E-04
37	GO:0006413: translational initiation	8.86E-04
38	GO:0045927: positive regulation of growth	9.02E-04
39	GO:0006097: glyoxylate cycle	9.02E-04
40	GO:0006665: sphingolipid metabolic process	9.02E-04
41	GO:0047484: regulation of response to osmotic stress	1.10E-03
42	GO:0009759: indole glucosinolate biosynthetic process	1.10E-03
43	GO:0034389: lipid particle organization	1.31E-03
44	GO:0017148: negative regulation of translation	1.31E-03
45	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.31E-03
46	GO:0015031: protein transport	1.43E-03
47	GO:0010044: response to aluminum ion	1.54E-03
48	GO:0006744: ubiquinone biosynthetic process	1.54E-03
49	GO:0080186: developmental vegetative growth	1.54E-03
50	GO:0006605: protein targeting	1.78E-03
51	GO:0006102: isocitrate metabolic process	1.78E-03
52	GO:0006367: transcription initiation from RNA polymerase II promoter	2.03E-03
53	GO:0010417: glucuronoxylan biosynthetic process	2.03E-03
54	GO:0010332: response to gamma radiation	2.29E-03
55	GO:0015780: nucleotide-sugar transport	2.29E-03
56	GO:0009086: methionine biosynthetic process	2.56E-03
57	GO:0008202: steroid metabolic process	2.56E-03
58	GO:0090332: stomatal closure	2.56E-03
59	GO:0010224: response to UV-B	2.99E-03
60	GO:0000266: mitochondrial fission	3.44E-03
61	GO:0010102: lateral root morphogenesis	3.76E-03
62	GO:0009553: embryo sac development	3.98E-03
63	GO:0034976: response to endoplasmic reticulum stress	4.75E-03
64	GO:0000162: tryptophan biosynthetic process	4.75E-03
65	GO:0000027: ribosomal large subunit assembly	5.10E-03
66	GO:0009863: salicylic acid mediated signaling pathway	5.10E-03
67	GO:0030150: protein import into mitochondrial matrix	5.10E-03
68	GO:0009058: biosynthetic process	5.39E-03
69	GO:0008299: isoprenoid biosynthetic process	5.46E-03
70	GO:0009269: response to desiccation	5.83E-03
71	GO:0009790: embryo development	5.97E-03
72	GO:0009814: defense response, incompatible interaction	6.20E-03
73	GO:0030433: ubiquitin-dependent ERAD pathway	6.20E-03
74	GO:0009411: response to UV	6.58E-03
75	GO:0009306: protein secretion	6.98E-03
76	GO:0009555: pollen development	7.37E-03
77	GO:0010051: xylem and phloem pattern formation	7.79E-03
78	GO:0010087: phloem or xylem histogenesis	7.79E-03
79	GO:0045489: pectin biosynthetic process	8.21E-03
80	GO:0006623: protein targeting to vacuole	9.06E-03
81	GO:0032502: developmental process	9.96E-03
82	GO:0001666: response to hypoxia	1.23E-02
83	GO:0009816: defense response to bacterium, incompatible interaction	1.28E-02
84	GO:0008219: cell death	1.49E-02
85	GO:0048767: root hair elongation	1.54E-02
86	GO:0006886: intracellular protein transport	1.68E-02
87	GO:0009867: jasmonic acid mediated signaling pathway	1.76E-02
88	GO:0016051: carbohydrate biosynthetic process	1.76E-02
89	GO:0006099: tricarboxylic acid cycle	1.81E-02
90	GO:0006979: response to oxidative stress	1.82E-02
91	GO:0016042: lipid catabolic process	1.95E-02
92	GO:0006631: fatty acid metabolic process	1.99E-02
93	GO:0048364: root development	2.10E-02
94	GO:0010114: response to red light	2.10E-02
95	GO:0009744: response to sucrose	2.10E-02
96	GO:0000209: protein polyubiquitination	2.16E-02
97	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.41E-02
98	GO:0009809: lignin biosynthetic process	2.60E-02
99	GO:0006486: protein glycosylation	2.60E-02
100	GO:0046686: response to cadmium ion	3.14E-02
101	GO:0009738: abscisic acid-activated signaling pathway	3.45E-02
102	GO:0051301: cell division	3.88E-02
103	GO:0045893: positive regulation of transcription, DNA-templated	4.08E-02

Rank	GO Term	Adjusted P value
1	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
2	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
3	GO:0005046: KDEL sequence binding	0.00E+00
4	GO:0034338: short-chain carboxylesterase activity	0.00E+00
5	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
6	GO:0051082: unfolded protein binding	1.80E-06
7	GO:0005460: UDP-glucose transmembrane transporter activity	4.33E-06
8	GO:0005459: UDP-galactose transmembrane transporter activity	1.37E-05
9	GO:0004656: procollagen-proline 4-dioxygenase activity	2.96E-05
10	GO:1990381: ubiquitin-specific protease binding	9.50E-05
11	GO:0047150: betaine-homocysteine S-methyltransferase activity	9.50E-05
12	GO:0050577: GDP-L-fucose synthase activity	9.50E-05
13	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	2.24E-04
14	GO:0000774: adenyl-nucleotide exchange factor activity	2.24E-04
15	GO:0003994: aconitate hydratase activity	2.24E-04
16	GO:0050347: trans-octaprenyltranstransferase activity	2.24E-04
17	GO:0031418: L-ascorbic acid binding	3.00E-04
18	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	5.37E-04
19	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	7.14E-04
20	GO:0004659: prenyltransferase activity	7.14E-04
21	GO:0004834: tryptophan synthase activity	7.14E-04
22	GO:0046923: ER retention sequence binding	7.14E-04
23	GO:0004623: phospholipase A2 activity	9.02E-04
24	GO:0003743: translation initiation factor activity	1.17E-03
25	GO:0008320: protein transmembrane transporter activity	1.54E-03
26	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.68E-03
27	GO:0052747: sinapyl alcohol dehydrogenase activity	1.78E-03
28	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.03E-03
29	GO:0008142: oxysterol binding	2.03E-03
30	GO:0004630: phospholipase D activity	2.03E-03
31	GO:0004161: dimethylallyltranstransferase activity	3.14E-03
32	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.44E-03
33	GO:0003924: GTPase activity	3.56E-03
34	GO:0005388: calcium-transporting ATPase activity	3.76E-03
35	GO:0031072: heat shock protein binding	3.76E-03
36	GO:0003712: transcription cofactor activity	4.41E-03
37	GO:0051087: chaperone binding	5.46E-03
38	GO:0030170: pyridoxal phosphate binding	5.68E-03
39	GO:0035251: UDP-glucosyltransferase activity	5.83E-03
40	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.20E-03
41	GO:0003756: protein disulfide isomerase activity	6.98E-03
42	GO:0005102: receptor binding	7.38E-03
43	GO:0050662: coenzyme binding	8.63E-03
44	GO:0016853: isomerase activity	8.63E-03
45	GO:0004872: receptor activity	9.06E-03
46	GO:0005507: copper ion binding	1.15E-02
47	GO:0030247: polysaccharide binding	1.38E-02
48	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.49E-02
49	GO:0005509: calcium ion binding	1.63E-02
50	GO:0050897: cobalt ion binding	1.65E-02
51	GO:0042803: protein homodimerization activity	1.71E-02
52	GO:0003746: translation elongation factor activity	1.76E-02
53	GO:0051539: 4 iron, 4 sulfur cluster binding	1.93E-02
54	GO:0003824: catalytic activity	2.03E-02
55	GO:0035091: phosphatidylinositol binding	2.23E-02
56	GO:0051537: 2 iron, 2 sulfur cluster binding	2.23E-02
57	GO:0045735: nutrient reservoir activity	2.93E-02
58	GO:0005524: ATP binding	3.62E-02
59	GO:0016758: transferase activity, transferring hexosyl groups	3.85E-02
60	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.00E-02
61	GO:0043565: sequence-specific DNA binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005789: endoplasmic reticulum membrane	1.28E-05
3	GO:0005783: endoplasmic reticulum	1.37E-05
4	GO:0005801: cis-Golgi network	2.96E-05
5	GO:0000836: Hrd1p ubiquitin ligase complex	9.50E-05
6	GO:0044322: endoplasmic reticulum quality control compartment	9.50E-05
7	GO:0001405: presequence translocase-associated import motor	9.50E-05
8	GO:0030134: ER to Golgi transport vesicle	2.24E-04
9	GO:0030176: integral component of endoplasmic reticulum membrane	2.41E-04
10	GO:0036513: Derlin-1 retrotranslocation complex	5.37E-04
11	GO:0005788: endoplasmic reticulum lumen	1.09E-03
12	GO:0005794: Golgi apparatus	1.26E-03
13	GO:0030173: integral component of Golgi membrane	1.31E-03
14	GO:0005811: lipid particle	2.03E-03
15	GO:0005774: vacuolar membrane	2.39E-03
16	GO:0030665: clathrin-coated vesicle membrane	2.56E-03
17	GO:0017119: Golgi transport complex	2.85E-03
18	GO:0005623: cell	5.26E-03
19	GO:0031410: cytoplasmic vesicle	6.20E-03
20	GO:0005739: mitochondrion	9.38E-03
21	GO:0005874: microtubule	1.31E-02
22	GO:0022625: cytosolic large ribosomal subunit	1.43E-02
23	GO:0000325: plant-type vacuole	1.65E-02
24	GO:0005773: vacuole	1.73E-02
25	GO:0031902: late endosome membrane	1.99E-02
26	GO:0000139: Golgi membrane	2.64E-02
27	GO:0005834: heterotrimeric G-protein complex	3.07E-02
28	GO:0009524: phragmoplast	4.07E-02
29	GO:0016021: integral component of membrane	4.54E-02
30	GO:0005759: mitochondrial matrix	4.61E-02