Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G25230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031116: positive regulation of microtubule polymerization0.00E+00
2GO:0046396: D-galacturonate metabolic process0.00E+00
3GO:0009249: protein lipoylation0.00E+00
4GO:0009106: lipoate metabolic process0.00E+00
5GO:0048657: anther wall tapetum cell differentiation3.90E-05
6GO:0042547: cell wall modification involved in multidimensional cell growth3.90E-05
7GO:0010729: positive regulation of hydrogen peroxide biosynthetic process3.90E-05
8GO:0051171: regulation of nitrogen compound metabolic process3.90E-05
9GO:0010275: NAD(P)H dehydrogenase complex assembly9.72E-05
10GO:0006013: mannose metabolic process1.68E-04
11GO:0001578: microtubule bundle formation1.68E-04
12GO:0010255: glucose mediated signaling pathway2.48E-04
13GO:0007020: microtubule nucleation3.33E-04
14GO:0015846: polyamine transport3.33E-04
15GO:0051322: anaphase3.33E-04
16GO:0006552: leucine catabolic process3.33E-04
17GO:0046785: microtubule polymerization4.25E-04
18GO:0009107: lipoate biosynthetic process4.25E-04
19GO:0042549: photosystem II stabilization5.22E-04
20GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity6.22E-04
21GO:0046835: carbohydrate phosphorylation6.22E-04
22GO:0022904: respiratory electron transport chain7.28E-04
23GO:0048528: post-embryonic root development7.28E-04
24GO:0009704: de-etiolation8.37E-04
25GO:0007389: pattern specification process9.50E-04
26GO:0006002: fructose 6-phosphate metabolic process9.50E-04
27GO:0022900: electron transport chain9.50E-04
28GO:0010380: regulation of chlorophyll biosynthetic process1.19E-03
29GO:0009740: gibberellic acid mediated signaling pathway1.23E-03
30GO:0009750: response to fructose1.44E-03
31GO:0007623: circadian rhythm2.23E-03
32GO:0010187: negative regulation of seed germination2.32E-03
33GO:0043622: cortical microtubule organization2.48E-03
34GO:0048511: rhythmic process2.64E-03
35GO:0009814: defense response, incompatible interaction2.80E-03
36GO:0080092: regulation of pollen tube growth2.80E-03
37GO:0006012: galactose metabolic process2.97E-03
38GO:0010584: pollen exine formation3.15E-03
39GO:0010268: brassinosteroid homeostasis3.69E-03
40GO:0009646: response to absence of light3.87E-03
41GO:0009749: response to glucose4.06E-03
42GO:0080167: response to karrikin4.23E-03
43GO:0002229: defense response to oomycetes4.26E-03
44GO:0016132: brassinosteroid biosynthetic process4.26E-03
45GO:0071281: cellular response to iron ion4.65E-03
46GO:0016125: sterol metabolic process4.85E-03
47GO:0010252: auxin homeostasis4.85E-03
48GO:0000910: cytokinesis5.26E-03
49GO:0009911: positive regulation of flower development5.47E-03
50GO:0006811: ion transport7.04E-03
51GO:0007568: aging7.27E-03
52GO:0009910: negative regulation of flower development7.27E-03
53GO:0009853: photorespiration7.75E-03
54GO:0008283: cell proliferation9.25E-03
55GO:0009926: auxin polar transport9.25E-03
56GO:0009744: response to sucrose9.25E-03
57GO:0009664: plant-type cell wall organization1.09E-02
58GO:0009416: response to light stimulus1.11E-02
59GO:0010224: response to UV-B1.17E-02
60GO:0051603: proteolysis involved in cellular protein catabolic process1.17E-02
61GO:0006417: regulation of translation1.23E-02
62GO:0006096: glycolytic process1.28E-02
63GO:0043086: negative regulation of catalytic activity1.28E-02
64GO:0051726: regulation of cell cycle1.52E-02
65GO:0042744: hydrogen peroxide catabolic process1.88E-02
66GO:0045490: pectin catabolic process2.16E-02
67GO:0010228: vegetative to reproductive phase transition of meristem2.23E-02
68GO:0006979: response to oxidative stress2.26E-02
69GO:0009739: response to gibberellin2.34E-02
70GO:0010468: regulation of gene expression2.45E-02
71GO:0009826: unidimensional cell growth2.86E-02
72GO:0009658: chloroplast organization2.94E-02
73GO:0009860: pollen tube growth3.10E-02
74GO:0007049: cell cycle3.18E-02
75GO:0009723: response to ethylene3.27E-02
76GO:0048364: root development4.66E-02
RankGO TermAdjusted P value
1GO:0004174: electron-transferring-flavoprotein dehydrogenase activity0.00E+00
2GO:0047912: galacturonokinase activity0.00E+00
3GO:0019808: polyamine binding0.00E+00
4GO:0048039: ubiquinone binding0.00E+00
5GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
6GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor0.00E+00
7GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
8GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity9.72E-05
9GO:0017118: lipoyltransferase activity9.72E-05
10GO:0016415: octanoyltransferase activity9.72E-05
11GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity9.72E-05
12GO:0030267: glyoxylate reductase (NADP) activity1.68E-04
13GO:0004335: galactokinase activity3.33E-04
14GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.22E-04
15GO:0004559: alpha-mannosidase activity6.22E-04
16GO:0003872: 6-phosphofructokinase activity7.28E-04
17GO:0051537: 2 iron, 2 sulfur cluster binding7.60E-04
18GO:0009672: auxin:proton symporter activity1.19E-03
19GO:0005089: Rho guanyl-nucleotide exchange factor activity1.44E-03
20GO:0010329: auxin efflux transmembrane transporter activity1.72E-03
21GO:0004857: enzyme inhibitor activity2.32E-03
22GO:0008017: microtubule binding2.33E-03
23GO:0046872: metal ion binding2.77E-03
24GO:0030570: pectate lyase activity2.97E-03
25GO:0001085: RNA polymerase II transcription factor binding3.69E-03
26GO:0019901: protein kinase binding4.06E-03
27GO:0009055: electron carrier activity6.68E-03
28GO:0004693: cyclin-dependent protein serine/threonine kinase activity7.04E-03
29GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding7.27E-03
30GO:0051539: 4 iron, 4 sulfur cluster binding8.48E-03
31GO:0004185: serine-type carboxypeptidase activity9.25E-03
32GO:0051287: NAD binding1.06E-02
33GO:0003777: microtubule motor activity1.23E-02
34GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.75E-02
35GO:0016829: lyase activity1.81E-02
36GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.88E-02
37GO:0015144: carbohydrate transmembrane transporter activity1.95E-02
38GO:0046910: pectinesterase inhibitor activity2.05E-02
39GO:0005351: sugar:proton symporter activity2.12E-02
40GO:0008168: methyltransferase activity2.86E-02
41GO:0046982: protein heterodimerization activity2.90E-02
42GO:0004601: peroxidase activity2.94E-02
43GO:0046983: protein dimerization activity3.00E-02
44GO:0003682: chromatin binding3.06E-02
45GO:0004672: protein kinase activity3.30E-02
46GO:0004497: monooxygenase activity3.43E-02
47GO:0020037: heme binding3.54E-02
48GO:0052689: carboxylic ester hydrolase activity3.68E-02
49GO:0004871: signal transducer activity4.03E-02
RankGO TermAdjusted P value
1GO:0042597: periplasmic space0.00E+00
2GO:0017133: mitochondrial electron transfer flavoprotein complex0.00E+00
3GO:0072686: mitotic spindle4.25E-04
4GO:0005945: 6-phosphofructokinase complex4.25E-04
5GO:0005819: spindle6.02E-04
6GO:0010005: cortical microtubule, transverse to long axis6.22E-04
7GO:0031305: integral component of mitochondrial inner membrane8.37E-04
8GO:0055028: cortical microtubule1.31E-03
9GO:0005740: mitochondrial envelope1.31E-03
10GO:0016324: apical plasma membrane1.31E-03
11GO:0005938: cell cortex1.72E-03
12GO:0009574: preprophase band1.72E-03
13GO:0045271: respiratory chain complex I2.48E-03
14GO:0005874: microtubule4.09E-03
15GO:0005667: transcription factor complex5.91E-03
16GO:0009707: chloroplast outer membrane6.58E-03
17GO:0005773: vacuole8.81E-03
18GO:0031966: mitochondrial membrane1.09E-02
19GO:0005747: mitochondrial respiratory chain complex I1.31E-02
20GO:0031225: anchored component of membrane1.73E-02
21GO:0009524: phragmoplast1.78E-02
22GO:0046658: anchored component of plasma membrane2.63E-02
23GO:0009536: plastid2.76E-02
24GO:0009505: plant-type cell wall2.82E-02
25GO:0009507: chloroplast2.85E-02
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Gene type



Gene DE type