co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G24610

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006114: glycerol biosynthetic process	0.00E+00
2	GO:0043087: regulation of GTPase activity	0.00E+00
3	GO:2000505: regulation of energy homeostasis	0.00E+00
4	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.15E-05
5	GO:0042547: cell wall modification involved in multidimensional cell growth	9.69E-05
6	GO:0006436: tryptophanyl-tRNA aminoacylation	9.69E-05
7	GO:0000066: mitochondrial ornithine transport	9.69E-05
8	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	9.69E-05
9	GO:0045037: protein import into chloroplast stroma	1.68E-04
10	GO:0006435: threonyl-tRNA aminoacylation	2.28E-04
11	GO:0080005: photosystem stoichiometry adjustment	2.28E-04
12	GO:0010289: homogalacturonan biosynthetic process	2.28E-04
13	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	3.80E-04
14	GO:0006730: one-carbon metabolic process	4.10E-04
15	GO:0010239: chloroplast mRNA processing	5.46E-04
16	GO:1901332: negative regulation of lateral root development	5.46E-04
17	GO:0006183: GTP biosynthetic process	7.26E-04
18	GO:0015846: polyamine transport	7.26E-04
19	GO:0051781: positive regulation of cell division	7.26E-04
20	GO:0051322: anaphase	7.26E-04
21	GO:0010158: abaxial cell fate specification	9.17E-04
22	GO:0010236: plastoquinone biosynthetic process	9.17E-04
23	GO:0045038: protein import into chloroplast thylakoid membrane	9.17E-04
24	GO:1902183: regulation of shoot apical meristem development	9.17E-04
25	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.12E-03
26	GO:0006555: methionine metabolic process	1.12E-03
27	GO:0009793: embryo development ending in seed dormancy	1.13E-03
28	GO:1901259: chloroplast rRNA processing	1.34E-03
29	GO:0042372: phylloquinone biosynthetic process	1.34E-03
30	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.57E-03
31	GO:0007568: aging	1.57E-03
32	GO:0006353: DNA-templated transcription, termination	1.81E-03
33	GO:0009704: de-etiolation	1.81E-03
34	GO:0045010: actin nucleation	1.81E-03
35	GO:0010492: maintenance of shoot apical meristem identity	1.81E-03
36	GO:0048564: photosystem I assembly	1.81E-03
37	GO:0022900: electron transport chain	2.07E-03
38	GO:0048507: meristem development	2.33E-03
39	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.33E-03
40	GO:0010206: photosystem II repair	2.33E-03
41	GO:2000024: regulation of leaf development	2.33E-03
42	GO:0000373: Group II intron splicing	2.33E-03
43	GO:0035999: tetrahydrofolate interconversion	2.61E-03
44	GO:0009086: methionine biosynthetic process	2.61E-03
45	GO:0006417: regulation of translation	3.28E-03
46	GO:0006096: glycolytic process	3.50E-03
47	GO:0030036: actin cytoskeleton organization	3.82E-03
48	GO:0006094: gluconeogenesis	3.82E-03
49	GO:0010207: photosystem II assembly	4.15E-03
50	GO:0090351: seedling development	4.49E-03
51	GO:0009944: polarity specification of adaxial/abaxial axis	5.19E-03
52	GO:0006289: nucleotide-excision repair	5.19E-03
53	GO:0006418: tRNA aminoacylation for protein translation	5.55E-03
54	GO:0048511: rhythmic process	5.93E-03
55	GO:0010431: seed maturation	5.93E-03
56	GO:0035428: hexose transmembrane transport	6.31E-03
57	GO:0009814: defense response, incompatible interaction	6.31E-03
58	GO:0019722: calcium-mediated signaling	7.10E-03
59	GO:0045490: pectin catabolic process	7.24E-03
60	GO:0016117: carotenoid biosynthetic process	7.51E-03
61	GO:0010154: fruit development	8.35E-03
62	GO:0048868: pollen tube development	8.35E-03
63	GO:0046323: glucose import	8.35E-03
64	GO:0007059: chromosome segregation	8.79E-03
65	GO:0016032: viral process	1.01E-02
66	GO:0007264: small GTPase mediated signal transduction	1.01E-02
67	GO:0010090: trichome morphogenesis	1.06E-02
68	GO:0009658: chloroplast organization	1.12E-02
69	GO:0007267: cell-cell signaling	1.16E-02
70	GO:0000910: cytokinesis	1.20E-02
71	GO:0016126: sterol biosynthetic process	1.25E-02
72	GO:0080167: response to karrikin	1.39E-02
73	GO:0010411: xyloglucan metabolic process	1.41E-02
74	GO:0016311: dephosphorylation	1.46E-02
75	GO:0009817: defense response to fungus, incompatible interaction	1.51E-02
76	GO:0048481: plant ovule development	1.51E-02
77	GO:0018298: protein-chromophore linkage	1.51E-02
78	GO:0010311: lateral root formation	1.57E-02
79	GO:0016051: carbohydrate biosynthetic process	1.79E-02
80	GO:0009853: photorespiration	1.79E-02
81	GO:0006839: mitochondrial transport	1.96E-02
82	GO:0051707: response to other organism	2.14E-02
83	GO:0042546: cell wall biogenesis	2.20E-02
84	GO:0009664: plant-type cell wall organization	2.52E-02
85	GO:0006364: rRNA processing	2.65E-02
86	GO:0009734: auxin-activated signaling pathway	2.90E-02
87	GO:0048316: seed development	3.05E-02
88	GO:0042744: hydrogen peroxide catabolic process	4.38E-02
89	GO:0009790: embryo development	4.46E-02
90	GO:0007165: signal transduction	4.63E-02
91	GO:0006413: translational initiation	4.78E-02
92	GO:0016036: cellular response to phosphate starvation	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
2	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
3	GO:0019808: polyamine binding	0.00E+00
4	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
5	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
6	GO:0005048: signal sequence binding	0.00E+00
7	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
8	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
9	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
10	GO:0005290: L-histidine transmembrane transporter activity	9.69E-05
11	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	9.69E-05
12	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	9.69E-05
13	GO:0004830: tryptophan-tRNA ligase activity	9.69E-05
14	GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity	9.69E-05
15	GO:0000064: L-ornithine transmembrane transporter activity	2.28E-04
16	GO:0004829: threonine-tRNA ligase activity	2.28E-04
17	GO:0004802: transketolase activity	2.28E-04
18	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	2.28E-04
19	GO:0003938: IMP dehydrogenase activity	2.28E-04
20	GO:0003913: DNA photolyase activity	3.80E-04
21	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	3.80E-04
22	GO:0030570: pectate lyase activity	4.47E-04
23	GO:0000254: C-4 methylsterol oxidase activity	5.46E-04
24	GO:0015181: arginine transmembrane transporter activity	5.46E-04
25	GO:0015189: L-lysine transmembrane transporter activity	5.46E-04
26	GO:0070628: proteasome binding	7.26E-04
27	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	7.26E-04
28	GO:0031593: polyubiquitin binding	1.12E-03
29	GO:0004017: adenylate kinase activity	1.34E-03
30	GO:0005096: GTPase activator activity	1.44E-03
31	GO:0009881: photoreceptor activity	1.57E-03
32	GO:0008312: 7S RNA binding	1.81E-03
33	GO:0043022: ribosome binding	1.81E-03
34	GO:0035091: phosphatidylinositol binding	2.39E-03
35	GO:0030955: potassium ion binding	2.61E-03
36	GO:0004743: pyruvate kinase activity	2.61E-03
37	GO:0004161: dimethylallyltranstransferase activity	3.20E-03
38	GO:0031072: heat shock protein binding	3.82E-03
39	GO:0043130: ubiquitin binding	5.19E-03
40	GO:0016829: lyase activity	5.68E-03
41	GO:0008565: protein transporter activity	6.28E-03
42	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.31E-03
43	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.75E-03
44	GO:0004812: aminoacyl-tRNA ligase activity	7.51E-03
45	GO:0010181: FMN binding	8.79E-03
46	GO:0005355: glucose transmembrane transporter activity	8.79E-03
47	GO:0019901: protein kinase binding	9.23E-03
48	GO:0016762: xyloglucan:xyloglucosyl transferase activity	9.68E-03
49	GO:0004518: nuclease activity	1.01E-02
50	GO:0003684: damaged DNA binding	1.11E-02
51	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.16E-02
52	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.41E-02
53	GO:0005525: GTP binding	1.43E-02
54	GO:0008236: serine-type peptidase activity	1.46E-02
55	GO:0003924: GTPase activity	2.06E-02
56	GO:0043621: protein self-association	2.27E-02
57	GO:0051537: 2 iron, 2 sulfur cluster binding	2.27E-02
58	GO:0016874: ligase activity	3.26E-02
59	GO:0051082: unfolded protein binding	3.41E-02
60	GO:0019843: rRNA binding	4.00E-02
61	GO:0004252: serine-type endopeptidase activity	4.30E-02
62	GO:0005515: protein binding	4.33E-02
63	GO:0015144: carbohydrate transmembrane transporter activity	4.54E-02
64	GO:0046872: metal ion binding	4.70E-02
65	GO:0016787: hydrolase activity	4.79E-02
66	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.80E-02
67	GO:0005351: sugar:proton symporter activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0009507: chloroplast	1.49E-12
3	GO:0009570: chloroplast stroma	1.78E-06
4	GO:0009574: preprophase band	4.03E-06
5	GO:0080085: signal recognition particle, chloroplast targeting	2.28E-04
6	GO:0009535: chloroplast thylakoid membrane	1.06E-03
7	GO:0031209: SCAR complex	1.12E-03
8	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.07E-03
9	GO:0000311: plastid large ribosomal subunit	3.50E-03
10	GO:0005578: proteinaceous extracellular matrix	3.82E-03
11	GO:0009706: chloroplast inner membrane	4.20E-03
12	GO:0009941: chloroplast envelope	4.58E-03
13	GO:0005623: cell	5.39E-03
14	GO:0009536: plastid	5.97E-03
15	GO:0009505: plant-type cell wall	6.16E-03
16	GO:0009579: thylakoid	9.56E-03
17	GO:0030529: intracellular ribonucleoprotein complex	1.25E-02
18	GO:0031225: anchored component of membrane	1.34E-02
19	GO:0019005: SCF ubiquitin ligase complex	1.51E-02
20	GO:0015934: large ribosomal subunit	1.68E-02
21	GO:0031977: thylakoid lumen	2.02E-02
22	GO:0048046: apoplast	3.04E-02
23	GO:0010287: plastoglobule	3.85E-02
24	GO:0009543: chloroplast thylakoid lumen	4.00E-02
25	GO:0009524: phragmoplast	4.15E-02
26	GO:0005759: mitochondrial matrix	4.70E-02