co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G23840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071985: multivesicular body sorting pathway	0.00E+00
2	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
3	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
4	GO:0005993: trehalose catabolic process	0.00E+00
5	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
6	GO:0080149: sucrose induced translational repression	0.00E+00
7	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
8	GO:0018063: cytochrome c-heme linkage	0.00E+00
9	GO:1902009: positive regulation of toxin transport	0.00E+00
10	GO:0051553: flavone biosynthetic process	0.00E+00
11	GO:0006605: protein targeting	1.09E-05
12	GO:0006623: protein targeting to vacuole	3.54E-05
13	GO:0015031: protein transport	1.21E-04
14	GO:0051707: response to other organism	3.10E-04
15	GO:0000077: DNA damage checkpoint	3.42E-04
16	GO:0042350: GDP-L-fucose biosynthetic process	3.42E-04
17	GO:1990641: response to iron ion starvation	3.42E-04
18	GO:0006680: glucosylceramide catabolic process	3.42E-04
19	GO:1903648: positive regulation of chlorophyll catabolic process	3.42E-04
20	GO:0016559: peroxisome fission	3.67E-04
21	GO:0006102: isocitrate metabolic process	3.67E-04
22	GO:0006886: intracellular protein transport	4.23E-04
23	GO:0008202: steroid metabolic process	6.39E-04
24	GO:0051607: defense response to virus	7.42E-04
25	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	7.45E-04
26	GO:0042853: L-alanine catabolic process	7.45E-04
27	GO:0040020: regulation of meiotic nuclear division	7.45E-04
28	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	7.45E-04
29	GO:0006101: citrate metabolic process	7.45E-04
30	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	7.45E-04
31	GO:0009816: defense response to bacterium, incompatible interaction	8.55E-04
32	GO:0000266: mitochondrial fission	9.79E-04
33	GO:0045037: protein import into chloroplast stroma	9.79E-04
34	GO:0010476: gibberellin mediated signaling pathway	1.21E-03
35	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.21E-03
36	GO:0009410: response to xenobiotic stimulus	1.21E-03
37	GO:0052546: cell wall pectin metabolic process	1.21E-03
38	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.21E-03
39	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.21E-03
40	GO:0071398: cellular response to fatty acid	1.21E-03
41	GO:0006065: UDP-glucuronate biosynthetic process	1.21E-03
42	GO:0007275: multicellular organism development	1.37E-03
43	GO:0090351: seedling development	1.39E-03
44	GO:0006099: tricarboxylic acid cycle	1.58E-03
45	GO:0030150: protein import into mitochondrial matrix	1.72E-03
46	GO:0070301: cellular response to hydrogen peroxide	1.74E-03
47	GO:0051639: actin filament network formation	1.74E-03
48	GO:0002239: response to oomycetes	1.74E-03
49	GO:0009226: nucleotide-sugar biosynthetic process	1.74E-03
50	GO:0071323: cellular response to chitin	1.74E-03
51	GO:0080024: indolebutyric acid metabolic process	1.74E-03
52	GO:0055070: copper ion homeostasis	1.74E-03
53	GO:0001676: long-chain fatty acid metabolic process	1.74E-03
54	GO:0055089: fatty acid homeostasis	1.74E-03
55	GO:0006631: fatty acid metabolic process	1.86E-03
56	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	2.33E-03
57	GO:0051764: actin crosslink formation	2.33E-03
58	GO:1902584: positive regulation of response to water deprivation	2.33E-03
59	GO:0006621: protein retention in ER lumen	2.33E-03
60	GO:1901002: positive regulation of response to salt stress	2.33E-03
61	GO:0015867: ATP transport	2.33E-03
62	GO:0009617: response to bacterium	2.56E-03
63	GO:0045927: positive regulation of growth	2.98E-03
64	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.98E-03
65	GO:0006097: glyoxylate cycle	2.98E-03
66	GO:0009229: thiamine diphosphate biosynthetic process	2.98E-03
67	GO:0015866: ADP transport	3.68E-03
68	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	3.68E-03
69	GO:0010256: endomembrane system organization	3.68E-03
70	GO:0009228: thiamine biosynthetic process	3.68E-03
71	GO:1900425: negative regulation of defense response to bacterium	3.68E-03
72	GO:0006014: D-ribose metabolic process	3.68E-03
73	GO:0009620: response to fungus	4.21E-03
74	GO:0030643: cellular phosphate ion homeostasis	4.43E-03
75	GO:0034389: lipid particle organization	4.43E-03
76	GO:0017148: negative regulation of translation	4.43E-03
77	GO:0048444: floral organ morphogenesis	4.43E-03
78	GO:0080186: developmental vegetative growth	5.23E-03
79	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	5.23E-03
80	GO:2000014: regulation of endosperm development	5.23E-03
81	GO:1900057: positive regulation of leaf senescence	5.23E-03
82	GO:0010044: response to aluminum ion	5.23E-03
83	GO:0016192: vesicle-mediated transport	5.72E-03
84	GO:0007155: cell adhesion	6.08E-03
85	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	6.08E-03
86	GO:0009850: auxin metabolic process	6.08E-03
87	GO:0045010: actin nucleation	6.08E-03
88	GO:0031540: regulation of anthocyanin biosynthetic process	6.08E-03
89	GO:0006002: fructose 6-phosphate metabolic process	6.98E-03
90	GO:0017004: cytochrome complex assembly	6.98E-03
91	GO:0009835: fruit ripening	7.91E-03
92	GO:0007338: single fertilization	7.91E-03
93	GO:0010332: response to gamma radiation	7.91E-03
94	GO:0010112: regulation of systemic acquired resistance	7.91E-03
95	GO:0009056: catabolic process	7.91E-03
96	GO:0000902: cell morphogenesis	7.91E-03
97	GO:0009086: methionine biosynthetic process	8.89E-03
98	GO:0016441: posttranscriptional gene silencing	9.92E-03
99	GO:0051555: flavonol biosynthetic process	9.92E-03
100	GO:0000103: sulfate assimilation	9.92E-03
101	GO:0009688: abscisic acid biosynthetic process	9.92E-03
102	GO:0019684: photosynthesis, light reaction	1.10E-02
103	GO:2000012: regulation of auxin polar transport	1.32E-02
104	GO:0030036: actin cytoskeleton organization	1.32E-02
105	GO:0034605: cellular response to heat	1.44E-02
106	GO:0002237: response to molecule of bacterial origin	1.44E-02
107	GO:0007015: actin filament organization	1.44E-02
108	GO:0007033: vacuole organization	1.56E-02
109	GO:0010053: root epidermal cell differentiation	1.56E-02
110	GO:0000162: tryptophan biosynthetic process	1.69E-02
111	GO:0006636: unsaturated fatty acid biosynthetic process	1.69E-02
112	GO:0009863: salicylic acid mediated signaling pathway	1.82E-02
113	GO:0051017: actin filament bundle assembly	1.82E-02
114	GO:0006289: nucleotide-excision repair	1.82E-02
115	GO:0051302: regulation of cell division	1.95E-02
116	GO:0006874: cellular calcium ion homeostasis	1.95E-02
117	GO:0006334: nucleosome assembly	2.08E-02
118	GO:0019915: lipid storage	2.08E-02
119	GO:0009269: response to desiccation	2.08E-02
120	GO:0006096: glycolytic process	2.09E-02
121	GO:0009738: abscisic acid-activated signaling pathway	2.16E-02
122	GO:0009814: defense response, incompatible interaction	2.22E-02
123	GO:0030433: ubiquitin-dependent ERAD pathway	2.22E-02
124	GO:0007005: mitochondrion organization	2.22E-02
125	GO:0031348: negative regulation of defense response	2.22E-02
126	GO:0042742: defense response to bacterium	2.26E-02
127	GO:0009693: ethylene biosynthetic process	2.37E-02
128	GO:0009411: response to UV	2.37E-02
129	GO:0006508: proteolysis	2.69E-02
130	GO:0010118: stomatal movement	2.81E-02
131	GO:0009960: endosperm development	2.96E-02
132	GO:0006662: glycerol ether metabolic process	2.96E-02
133	GO:0010182: sugar mediated signaling pathway	2.96E-02
134	GO:0019252: starch biosynthetic process	3.28E-02
135	GO:0071554: cell wall organization or biogenesis	3.44E-02
136	GO:0002229: defense response to oomycetes	3.44E-02
137	GO:0010193: response to ozone	3.44E-02
138	GO:0006891: intra-Golgi vesicle-mediated transport	3.44E-02
139	GO:0006635: fatty acid beta-oxidation	3.44E-02
140	GO:0009751: response to salicylic acid	3.47E-02
141	GO:0016032: viral process	3.61E-02
142	GO:0009567: double fertilization forming a zygote and endosperm	3.95E-02
143	GO:0006633: fatty acid biosynthetic process	3.95E-02
144	GO:0071805: potassium ion transmembrane transport	4.12E-02
145	GO:0010150: leaf senescence	4.34E-02
146	GO:0001666: response to hypoxia	4.47E-02
147	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.65E-02
148	GO:0046686: response to cadmium ion	4.70E-02
149	GO:0006906: vesicle fusion	4.84E-02
150	GO:0009739: response to gibberellin	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
3	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
4	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
5	GO:0050334: thiaminase activity	0.00E+00
6	GO:0005046: KDEL sequence binding	0.00E+00
7	GO:0061133: endopeptidase activator activity	0.00E+00
8	GO:0034338: short-chain carboxylesterase activity	0.00E+00
9	GO:0102391: decanoate--CoA ligase activity	2.25E-04
10	GO:0008320: protein transmembrane transporter activity	2.93E-04
11	GO:0004467: long-chain fatty acid-CoA ligase activity	2.93E-04
12	GO:0050577: GDP-L-fucose synthase activity	3.42E-04
13	GO:0015927: trehalase activity	3.42E-04
14	GO:0032266: phosphatidylinositol-3-phosphate binding	3.42E-04
15	GO:0030942: endoplasmic reticulum signal peptide binding	3.42E-04
16	GO:0004348: glucosylceramidase activity	3.42E-04
17	GO:0047150: betaine-homocysteine S-methyltransferase activity	3.42E-04
18	GO:0009000: selenocysteine lyase activity	3.42E-04
19	GO:0016920: pyroglutamyl-peptidase activity	3.42E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.42E-04
21	GO:0008142: oxysterol binding	4.51E-04
22	GO:0004630: phospholipase D activity	4.51E-04
23	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.51E-04
24	GO:0003994: aconitate hydratase activity	7.45E-04
25	GO:0000774: adenyl-nucleotide exchange factor activity	7.45E-04
26	GO:0032934: sterol binding	7.45E-04
27	GO:0050736: O-malonyltransferase activity	7.45E-04
28	GO:0010331: gibberellin binding	7.45E-04
29	GO:0003979: UDP-glucose 6-dehydrogenase activity	1.21E-03
30	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	1.21E-03
31	GO:0000975: regulatory region DNA binding	1.21E-03
32	GO:0031418: L-ascorbic acid binding	1.72E-03
33	GO:0043130: ubiquitin binding	1.72E-03
34	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.74E-03
35	GO:0035529: NADH pyrophosphatase activity	1.74E-03
36	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.74E-03
37	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.74E-03
38	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.74E-03
39	GO:0004834: tryptophan synthase activity	2.33E-03
40	GO:0046923: ER retention sequence binding	2.33E-03
41	GO:0070628: proteasome binding	2.33E-03
42	GO:0005198: structural molecule activity	2.39E-03
43	GO:0030151: molybdenum ion binding	2.98E-03
44	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.98E-03
45	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.98E-03
46	GO:0004623: phospholipase A2 activity	2.98E-03
47	GO:0047631: ADP-ribose diphosphatase activity	2.98E-03
48	GO:0050662: coenzyme binding	3.67E-03
49	GO:0000210: NAD+ diphosphatase activity	3.68E-03
50	GO:0015217: ADP transmembrane transporter activity	4.43E-03
51	GO:0004747: ribokinase activity	4.43E-03
52	GO:0005347: ATP transmembrane transporter activity	4.43E-03
53	GO:0004656: procollagen-proline 4-dioxygenase activity	4.43E-03
54	GO:0003872: 6-phosphofructokinase activity	5.23E-03
55	GO:0008312: 7S RNA binding	6.08E-03
56	GO:0047893: flavonol 3-O-glucosyltransferase activity	6.08E-03
57	GO:0052747: sinapyl alcohol dehydrogenase activity	6.08E-03
58	GO:0004869: cysteine-type endopeptidase inhibitor activity	6.08E-03
59	GO:0008865: fructokinase activity	6.08E-03
60	GO:0004806: triglyceride lipase activity	7.19E-03
61	GO:0030247: polysaccharide binding	7.19E-03
62	GO:0030170: pyridoxal phosphate binding	7.20E-03
63	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	7.91E-03
64	GO:0004743: pyruvate kinase activity	8.89E-03
65	GO:0045309: protein phosphorylated amino acid binding	8.89E-03
66	GO:0030955: potassium ion binding	8.89E-03
67	GO:0030234: enzyme regulator activity	9.92E-03
68	GO:0004864: protein phosphatase inhibitor activity	9.92E-03
69	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.01E-02
70	GO:0019904: protein domain specific binding	1.10E-02
71	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.21E-02
72	GO:0004022: alcohol dehydrogenase (NAD) activity	1.32E-02
73	GO:0004867: serine-type endopeptidase inhibitor activity	1.56E-02
74	GO:0008061: chitin binding	1.56E-02
75	GO:0003712: transcription cofactor activity	1.56E-02
76	GO:0005217: intracellular ligand-gated ion channel activity	1.56E-02
77	GO:0004970: ionotropic glutamate receptor activity	1.56E-02
78	GO:0051287: NAD binding	1.59E-02
79	GO:0051536: iron-sulfur cluster binding	1.82E-02
80	GO:0016887: ATPase activity	1.85E-02
81	GO:0051087: chaperone binding	1.95E-02
82	GO:0015079: potassium ion transmembrane transporter activity	1.95E-02
83	GO:0035251: UDP-glucosyltransferase activity	2.08E-02
84	GO:0008810: cellulase activity	2.37E-02
85	GO:0015035: protein disulfide oxidoreductase activity	2.59E-02
86	GO:0005102: receptor binding	2.66E-02
87	GO:0047134: protein-disulfide reductase activity	2.66E-02
88	GO:0042803: protein homodimerization activity	2.89E-02
89	GO:0004791: thioredoxin-disulfide reductase activity	3.12E-02
90	GO:0016853: isomerase activity	3.12E-02
91	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.24E-02
92	GO:0004872: receptor activity	3.28E-02
93	GO:0008565: protein transporter activity	3.77E-02
94	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.78E-02
95	GO:0051015: actin filament binding	3.78E-02
96	GO:0016791: phosphatase activity	3.95E-02
97	GO:0008237: metallopeptidase activity	4.12E-02
98	GO:0016413: O-acetyltransferase activity	4.30E-02

Rank	GO Term	Adjusted P value
1	GO:0017119: Golgi transport complex	3.77E-05
2	GO:0005794: Golgi apparatus	4.77E-05
3	GO:0005789: endoplasmic reticulum membrane	5.62E-05
4	GO:0005801: cis-Golgi network	2.25E-04
5	GO:0045252: oxoglutarate dehydrogenase complex	3.42E-04
6	GO:0001405: presequence translocase-associated import motor	3.42E-04
7	GO:0016021: integral component of membrane	5.26E-04
8	GO:0030665: clathrin-coated vesicle membrane	6.39E-04
9	GO:0030134: ER to Golgi transport vesicle	7.45E-04
10	GO:0000814: ESCRT II complex	7.45E-04
11	GO:0042406: extrinsic component of endoplasmic reticulum membrane	1.21E-03
12	GO:0005829: cytosol	1.23E-03
13	GO:0005783: endoplasmic reticulum	1.25E-03
14	GO:0032432: actin filament bundle	1.74E-03
15	GO:0030658: transport vesicle membrane	1.74E-03
16	GO:0031902: late endosome membrane	1.86E-03
17	GO:0005741: mitochondrial outer membrane	2.09E-03
18	GO:0005945: 6-phosphofructokinase complex	2.98E-03
19	GO:0000164: protein phosphatase type 1 complex	2.98E-03
20	GO:0005885: Arp2/3 protein complex	4.43E-03
21	GO:0009506: plasmodesma	4.63E-03
22	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	5.23E-03
23	GO:0009986: cell surface	5.23E-03
24	GO:0005778: peroxisomal membrane	5.43E-03
25	GO:0005774: vacuolar membrane	5.85E-03
26	GO:0005623: cell	6.52E-03
27	GO:0005779: integral component of peroxisomal membrane	6.98E-03
28	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	6.98E-03
29	GO:0005811: lipid particle	6.98E-03
30	GO:0005743: mitochondrial inner membrane	8.57E-03
31	GO:0008540: proteasome regulatory particle, base subcomplex	8.89E-03
32	GO:0008541: proteasome regulatory particle, lid subcomplex	1.10E-02
33	GO:0005884: actin filament	1.10E-02
34	GO:0046658: anchored component of plasma membrane	1.36E-02
35	GO:0005795: Golgi stack	1.56E-02
36	GO:0005886: plasma membrane	1.66E-02
37	GO:0005769: early endosome	1.69E-02
38	GO:0005737: cytoplasm	2.06E-02
39	GO:0031410: cytoplasmic vesicle	2.22E-02
40	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.51E-02
41	GO:0005777: peroxisome	2.78E-02
42	GO:0005770: late endosome	2.96E-02
43	GO:0009543: chloroplast thylakoid lumen	3.15E-02
44	GO:0019898: extrinsic component of membrane	3.28E-02
45	GO:0031965: nuclear membrane	3.28E-02
46	GO:0032580: Golgi cisterna membrane	3.95E-02
47	GO:0005802: trans-Golgi network	4.50E-02
48	GO:0005615: extracellular space	4.84E-02