GO Enrichment Analysis of Co-expressed Genes with
AT1G23400
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0098586: cellular response to virus | 0.00E+00 |
| 4 | GO:0010203: response to very low fluence red light stimulus | 0.00E+00 |
| 5 | GO:0007037: vacuolar phosphate transport | 0.00E+00 |
| 6 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 7 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.61E-07 |
| 8 | GO:0090351: seedling development | 1.67E-05 |
| 9 | GO:0071482: cellular response to light stimulus | 1.33E-04 |
| 10 | GO:0015798: myo-inositol transport | 1.50E-04 |
| 11 | GO:0010201: response to continuous far red light stimulus by the high-irradiance response system | 1.50E-04 |
| 12 | GO:0043087: regulation of GTPase activity | 1.50E-04 |
| 13 | GO:1902458: positive regulation of stomatal opening | 1.50E-04 |
| 14 | GO:0015969: guanosine tetraphosphate metabolic process | 1.50E-04 |
| 15 | GO:0006352: DNA-templated transcription, initiation | 2.70E-04 |
| 16 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 3.42E-04 |
| 17 | GO:0000256: allantoin catabolic process | 3.42E-04 |
| 18 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.42E-04 |
| 19 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.42E-04 |
| 20 | GO:0046741: transport of virus in host, tissue to tissue | 3.42E-04 |
| 21 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 5.61E-04 |
| 22 | GO:0010136: ureide catabolic process | 5.61E-04 |
| 23 | GO:0017006: protein-tetrapyrrole linkage | 5.61E-04 |
| 24 | GO:0005977: glycogen metabolic process | 5.61E-04 |
| 25 | GO:0000913: preprophase band assembly | 5.61E-04 |
| 26 | GO:0031022: nuclear migration along microfilament | 5.61E-04 |
| 27 | GO:0009658: chloroplast organization | 6.31E-04 |
| 28 | GO:0006730: one-carbon metabolic process | 7.29E-04 |
| 29 | GO:0042989: sequestering of actin monomers | 8.03E-04 |
| 30 | GO:0009226: nucleotide-sugar biosynthetic process | 8.03E-04 |
| 31 | GO:0043572: plastid fission | 8.03E-04 |
| 32 | GO:2001141: regulation of RNA biosynthetic process | 8.03E-04 |
| 33 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.03E-04 |
| 34 | GO:0009584: detection of visible light | 8.03E-04 |
| 35 | GO:0006145: purine nucleobase catabolic process | 8.03E-04 |
| 36 | GO:0009306: protein secretion | 8.59E-04 |
| 37 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 9.27E-04 |
| 38 | GO:0031122: cytoplasmic microtubule organization | 1.06E-03 |
| 39 | GO:0071483: cellular response to blue light | 1.06E-03 |
| 40 | GO:0010021: amylopectin biosynthetic process | 1.06E-03 |
| 41 | GO:0051322: anaphase | 1.06E-03 |
| 42 | GO:0006661: phosphatidylinositol biosynthetic process | 1.06E-03 |
| 43 | GO:0007018: microtubule-based movement | 1.15E-03 |
| 44 | GO:0007059: chromosome segregation | 1.15E-03 |
| 45 | GO:0080110: sporopollenin biosynthetic process | 1.35E-03 |
| 46 | GO:0030041: actin filament polymerization | 1.35E-03 |
| 47 | GO:0009904: chloroplast accumulation movement | 1.35E-03 |
| 48 | GO:0016123: xanthophyll biosynthetic process | 1.35E-03 |
| 49 | GO:0016032: viral process | 1.40E-03 |
| 50 | GO:0010190: cytochrome b6f complex assembly | 1.65E-03 |
| 51 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.65E-03 |
| 52 | GO:0006555: methionine metabolic process | 1.65E-03 |
| 53 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.65E-03 |
| 54 | GO:0000910: cytokinesis | 1.78E-03 |
| 55 | GO:0009612: response to mechanical stimulus | 1.98E-03 |
| 56 | GO:0017148: negative regulation of translation | 1.98E-03 |
| 57 | GO:0009903: chloroplast avoidance movement | 1.98E-03 |
| 58 | GO:0009645: response to low light intensity stimulus | 2.33E-03 |
| 59 | GO:0051510: regulation of unidimensional cell growth | 2.33E-03 |
| 60 | GO:0010161: red light signaling pathway | 2.33E-03 |
| 61 | GO:0009395: phospholipid catabolic process | 2.33E-03 |
| 62 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.33E-03 |
| 63 | GO:0042255: ribosome assembly | 2.70E-03 |
| 64 | GO:0006353: DNA-templated transcription, termination | 2.70E-03 |
| 65 | GO:0006605: protein targeting | 2.70E-03 |
| 66 | GO:2000070: regulation of response to water deprivation | 2.70E-03 |
| 67 | GO:0010492: maintenance of shoot apical meristem identity | 2.70E-03 |
| 68 | GO:0048507: meristem development | 3.49E-03 |
| 69 | GO:0009821: alkaloid biosynthetic process | 3.49E-03 |
| 70 | GO:0010206: photosystem II repair | 3.49E-03 |
| 71 | GO:0046685: response to arsenic-containing substance | 3.49E-03 |
| 72 | GO:0009793: embryo development ending in seed dormancy | 3.75E-03 |
| 73 | GO:0009638: phototropism | 3.91E-03 |
| 74 | GO:0035999: tetrahydrofolate interconversion | 3.91E-03 |
| 75 | GO:0009098: leucine biosynthetic process | 3.91E-03 |
| 76 | GO:0009086: methionine biosynthetic process | 3.91E-03 |
| 77 | GO:0042546: cell wall biogenesis | 4.14E-03 |
| 78 | GO:0019538: protein metabolic process | 4.35E-03 |
| 79 | GO:0043069: negative regulation of programmed cell death | 4.35E-03 |
| 80 | GO:0006259: DNA metabolic process | 4.35E-03 |
| 81 | GO:0006265: DNA topological change | 4.80E-03 |
| 82 | GO:0009684: indoleacetic acid biosynthetic process | 4.80E-03 |
| 83 | GO:0045037: protein import into chloroplast stroma | 5.27E-03 |
| 84 | GO:0009767: photosynthetic electron transport chain | 5.75E-03 |
| 85 | GO:0010020: chloroplast fission | 6.25E-03 |
| 86 | GO:0006096: glycolytic process | 6.32E-03 |
| 87 | GO:0006833: water transport | 7.30E-03 |
| 88 | GO:0007010: cytoskeleton organization | 7.84E-03 |
| 89 | GO:0006629: lipid metabolic process | 7.86E-03 |
| 90 | GO:0051302: regulation of cell division | 8.40E-03 |
| 91 | GO:0010431: seed maturation | 8.97E-03 |
| 92 | GO:0031348: negative regulation of defense response | 9.56E-03 |
| 93 | GO:0009737: response to abscisic acid | 1.06E-02 |
| 94 | GO:0019722: calcium-mediated signaling | 1.08E-02 |
| 95 | GO:0010584: pollen exine formation | 1.08E-02 |
| 96 | GO:0071555: cell wall organization | 1.09E-02 |
| 97 | GO:0016117: carotenoid biosynthetic process | 1.14E-02 |
| 98 | GO:0008033: tRNA processing | 1.20E-02 |
| 99 | GO:0034220: ion transmembrane transport | 1.20E-02 |
| 100 | GO:0006413: translational initiation | 1.23E-02 |
| 101 | GO:0048868: pollen tube development | 1.27E-02 |
| 102 | GO:0010268: brassinosteroid homeostasis | 1.27E-02 |
| 103 | GO:0045489: pectin biosynthetic process | 1.27E-02 |
| 104 | GO:0019252: starch biosynthetic process | 1.41E-02 |
| 105 | GO:0008654: phospholipid biosynthetic process | 1.41E-02 |
| 106 | GO:0000302: response to reactive oxygen species | 1.47E-02 |
| 107 | GO:0016132: brassinosteroid biosynthetic process | 1.47E-02 |
| 108 | GO:0010583: response to cyclopentenone | 1.55E-02 |
| 109 | GO:0019761: glucosinolate biosynthetic process | 1.55E-02 |
| 110 | GO:0032502: developmental process | 1.55E-02 |
| 111 | GO:0009630: gravitropism | 1.55E-02 |
| 112 | GO:0016125: sterol metabolic process | 1.69E-02 |
| 113 | GO:0007267: cell-cell signaling | 1.76E-02 |
| 114 | GO:0010027: thylakoid membrane organization | 1.92E-02 |
| 115 | GO:0016126: sterol biosynthetic process | 1.92E-02 |
| 116 | GO:0010029: regulation of seed germination | 1.99E-02 |
| 117 | GO:0010411: xyloglucan metabolic process | 2.15E-02 |
| 118 | GO:0055085: transmembrane transport | 2.20E-02 |
| 119 | GO:0016311: dephosphorylation | 2.23E-02 |
| 120 | GO:0018298: protein-chromophore linkage | 2.31E-02 |
| 121 | GO:0010218: response to far red light | 2.48E-02 |
| 122 | GO:0048527: lateral root development | 2.56E-02 |
| 123 | GO:0007568: aging | 2.56E-02 |
| 124 | GO:0045087: innate immune response | 2.74E-02 |
| 125 | GO:0009637: response to blue light | 2.74E-02 |
| 126 | GO:0009853: photorespiration | 2.74E-02 |
| 127 | GO:0055114: oxidation-reduction process | 2.94E-02 |
| 128 | GO:0006631: fatty acid metabolic process | 3.09E-02 |
| 129 | GO:0009640: photomorphogenesis | 3.28E-02 |
| 130 | GO:0010114: response to red light | 3.28E-02 |
| 131 | GO:0009644: response to high light intensity | 3.47E-02 |
| 132 | GO:0006855: drug transmembrane transport | 3.66E-02 |
| 133 | GO:0042538: hyperosmotic salinity response | 3.85E-02 |
| 134 | GO:0006364: rRNA processing | 4.05E-02 |
| 135 | GO:0009585: red, far-red light phototransduction | 4.05E-02 |
| 136 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.15E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 2 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 3 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 4 | GO:0005048: signal sequence binding | 0.00E+00 |
| 5 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 6 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0001053: plastid sigma factor activity | 1.80E-05 |
| 8 | GO:0016987: sigma factor activity | 1.80E-05 |
| 9 | GO:0043022: ribosome binding | 1.06E-04 |
| 10 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.50E-04 |
| 11 | GO:0008568: microtubule-severing ATPase activity | 1.50E-04 |
| 12 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 1.50E-04 |
| 13 | GO:0031516: far-red light photoreceptor activity | 1.50E-04 |
| 14 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.50E-04 |
| 15 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 1.50E-04 |
| 16 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.42E-04 |
| 17 | GO:0019156: isoamylase activity | 3.42E-04 |
| 18 | GO:0004802: transketolase activity | 3.42E-04 |
| 19 | GO:0008728: GTP diphosphokinase activity | 3.42E-04 |
| 20 | GO:0005366: myo-inositol:proton symporter activity | 3.42E-04 |
| 21 | GO:0010291: carotene beta-ring hydroxylase activity | 3.42E-04 |
| 22 | GO:0009883: red or far-red light photoreceptor activity | 3.42E-04 |
| 23 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 3.42E-04 |
| 24 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.42E-04 |
| 25 | GO:0003861: 3-isopropylmalate dehydratase activity | 5.61E-04 |
| 26 | GO:0008020: G-protein coupled photoreceptor activity | 5.61E-04 |
| 27 | GO:0004180: carboxypeptidase activity | 5.61E-04 |
| 28 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 8.03E-04 |
| 29 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.06E-03 |
| 30 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.06E-03 |
| 31 | GO:0016836: hydro-lyase activity | 1.06E-03 |
| 32 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.06E-03 |
| 33 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.06E-03 |
| 34 | GO:0048038: quinone binding | 1.31E-03 |
| 35 | GO:0003785: actin monomer binding | 1.35E-03 |
| 36 | GO:0004040: amidase activity | 1.35E-03 |
| 37 | GO:0008374: O-acyltransferase activity | 1.35E-03 |
| 38 | GO:0004556: alpha-amylase activity | 1.65E-03 |
| 39 | GO:0015144: carbohydrate transmembrane transporter activity | 1.75E-03 |
| 40 | GO:0005351: sugar:proton symporter activity | 2.04E-03 |
| 41 | GO:0008017: microtubule binding | 2.22E-03 |
| 42 | GO:0008236: serine-type peptidase activity | 2.33E-03 |
| 43 | GO:0008312: 7S RNA binding | 2.70E-03 |
| 44 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 3.08E-03 |
| 45 | GO:0030955: potassium ion binding | 3.91E-03 |
| 46 | GO:0016844: strictosidine synthase activity | 3.91E-03 |
| 47 | GO:0004743: pyruvate kinase activity | 3.91E-03 |
| 48 | GO:0004673: protein histidine kinase activity | 4.35E-03 |
| 49 | GO:0016491: oxidoreductase activity | 4.60E-03 |
| 50 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.35E-03 |
| 51 | GO:0008081: phosphoric diester hydrolase activity | 5.75E-03 |
| 52 | GO:0000155: phosphorelay sensor kinase activity | 5.75E-03 |
| 53 | GO:0003777: microtubule motor activity | 5.92E-03 |
| 54 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.25E-03 |
| 55 | GO:0004871: signal transducer activity | 6.39E-03 |
| 56 | GO:0016874: ligase activity | 7.17E-03 |
| 57 | GO:0005525: GTP binding | 7.95E-03 |
| 58 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.80E-03 |
| 59 | GO:0003727: single-stranded RNA binding | 1.08E-02 |
| 60 | GO:0003824: catalytic activity | 1.25E-02 |
| 61 | GO:0008080: N-acetyltransferase activity | 1.27E-02 |
| 62 | GO:0050662: coenzyme binding | 1.34E-02 |
| 63 | GO:0016887: ATPase activity | 1.37E-02 |
| 64 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.47E-02 |
| 65 | GO:0003743: translation initiation factor activity | 1.54E-02 |
| 66 | GO:0042802: identical protein binding | 1.68E-02 |
| 67 | GO:0015250: water channel activity | 1.92E-02 |
| 68 | GO:0004672: protein kinase activity | 1.94E-02 |
| 69 | GO:0016788: hydrolase activity, acting on ester bonds | 2.09E-02 |
| 70 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.15E-02 |
| 71 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.31E-02 |
| 72 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.31E-02 |
| 73 | GO:0015238: drug transmembrane transporter activity | 2.40E-02 |
| 74 | GO:0005096: GTPase activator activity | 2.40E-02 |
| 75 | GO:0003993: acid phosphatase activity | 2.83E-02 |
| 76 | GO:0004185: serine-type carboxypeptidase activity | 3.28E-02 |
| 77 | GO:0035091: phosphatidylinositol binding | 3.47E-02 |
| 78 | GO:0003924: GTPase activity | 3.74E-02 |
| 79 | GO:0005506: iron ion binding | 3.86E-02 |
| 80 | GO:0003690: double-stranded DNA binding | 4.15E-02 |
| 81 | GO:0004650: polygalacturonase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.77E-15 |
| 3 | GO:0080085: signal recognition particle, chloroplast targeting | 1.11E-06 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.47E-06 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.92E-06 |
| 6 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.33E-04 |
| 7 | GO:0009574: preprophase band | 3.54E-04 |
| 8 | GO:0033281: TAT protein transport complex | 5.61E-04 |
| 9 | GO:0009941: chloroplast envelope | 5.71E-04 |
| 10 | GO:0005871: kinesin complex | 9.27E-04 |
| 11 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 1.06E-03 |
| 12 | GO:0009512: cytochrome b6f complex | 1.35E-03 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 1.40E-03 |
| 14 | GO:0005623: cell | 1.45E-03 |
| 15 | GO:0046658: anchored component of plasma membrane | 2.99E-03 |
| 16 | GO:0016604: nuclear body | 3.91E-03 |
| 17 | GO:0005874: microtubule | 4.59E-03 |
| 18 | GO:0005938: cell cortex | 5.75E-03 |
| 19 | GO:0005773: vacuole | 6.75E-03 |
| 20 | GO:0030176: integral component of endoplasmic reticulum membrane | 6.77E-03 |
| 21 | GO:0042651: thylakoid membrane | 8.40E-03 |
| 22 | GO:0009654: photosystem II oxygen evolving complex | 8.40E-03 |
| 23 | GO:0009524: phragmoplast | 1.01E-02 |
| 24 | GO:0015629: actin cytoskeleton | 1.02E-02 |
| 25 | GO:0009570: chloroplast stroma | 1.06E-02 |
| 26 | GO:0009705: plant-type vacuole membrane | 1.32E-02 |
| 27 | GO:0009504: cell plate | 1.41E-02 |
| 28 | GO:0019898: extrinsic component of membrane | 1.41E-02 |
| 29 | GO:0009536: plastid | 1.48E-02 |
| 30 | GO:0005694: chromosome | 1.55E-02 |
| 31 | GO:0009295: nucleoid | 1.76E-02 |
| 32 | GO:0009579: thylakoid | 2.04E-02 |
| 33 | GO:0019005: SCF ubiquitin ligase complex | 2.31E-02 |
| 34 | GO:0009707: chloroplast outer membrane | 2.31E-02 |
| 35 | GO:0031969: chloroplast membrane | 2.54E-02 |
| 36 | GO:0031225: anchored component of membrane | 2.85E-02 |
| 37 | GO:0005819: spindle | 2.91E-02 |
| 38 | GO:0031977: thylakoid lumen | 3.09E-02 |
| 39 | GO:0005622: intracellular | 3.35E-02 |
| 40 | GO:0016607: nuclear speck | 4.67E-02 |