Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G22400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046865: terpenoid transport0.00E+00
2GO:0033587: shikimate biosynthetic process0.00E+00
3GO:0010324: membrane invagination0.00E+00
4GO:0071327: cellular response to trehalose stimulus0.00E+00
5GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
6GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
7GO:0015690: aluminum cation transport0.00E+00
8GO:1900367: positive regulation of defense response to insect0.00E+00
9GO:0009312: oligosaccharide biosynthetic process0.00E+00
10GO:0009751: response to salicylic acid3.76E-07
11GO:0006979: response to oxidative stress4.20E-07
12GO:0060548: negative regulation of cell death7.62E-07
13GO:0051707: response to other organism2.83E-06
14GO:0009753: response to jasmonic acid5.20E-06
15GO:0019725: cellular homeostasis6.25E-06
16GO:0006952: defense response1.09E-05
17GO:0009737: response to abscisic acid2.10E-05
18GO:0010186: positive regulation of cellular defense response2.19E-05
19GO:0010112: regulation of systemic acquired resistance2.67E-05
20GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway3.56E-05
21GO:0010200: response to chitin6.99E-05
22GO:0010150: leaf senescence7.98E-05
23GO:0045227: capsule polysaccharide biosynthetic process8.50E-05
24GO:0033358: UDP-L-arabinose biosynthetic process8.50E-05
25GO:0009626: plant-type hypersensitive response1.34E-04
26GO:0009611: response to wounding1.88E-04
27GO:0002238: response to molecule of fungal origin1.90E-04
28GO:0009643: photosynthetic acclimation1.90E-04
29GO:0031348: negative regulation of defense response2.60E-04
30GO:0071456: cellular response to hypoxia2.60E-04
31GO:0009625: response to insect2.93E-04
32GO:0009414: response to water deprivation3.03E-04
33GO:0042742: defense response to bacterium3.25E-04
34GO:1900056: negative regulation of leaf senescence3.33E-04
35GO:1901183: positive regulation of camalexin biosynthetic process3.73E-04
36GO:0009270: response to humidity3.73E-04
37GO:0050691: regulation of defense response to virus by host3.73E-04
38GO:0034214: protein hexamerization3.73E-04
39GO:0032491: detection of molecule of fungal origin3.73E-04
40GO:0042759: long-chain fatty acid biosynthetic process3.73E-04
41GO:1990542: mitochondrial transmembrane transport3.73E-04
42GO:0048508: embryonic meristem development3.73E-04
43GO:0015760: glucose-6-phosphate transport3.73E-04
44GO:0019567: arabinose biosynthetic process3.73E-04
45GO:0009609: response to symbiotic bacterium3.73E-04
46GO:0033306: phytol metabolic process3.73E-04
47GO:0009700: indole phytoalexin biosynthetic process3.73E-04
48GO:0042391: regulation of membrane potential4.05E-04
49GO:0030091: protein repair4.18E-04
50GO:0009646: response to absence of light4.92E-04
51GO:0010120: camalexin biosynthetic process5.11E-04
52GO:0010204: defense response signaling pathway, resistance gene-independent5.11E-04
53GO:2000031: regulation of salicylic acid mediated signaling pathway5.11E-04
54GO:0031347: regulation of defense response5.15E-04
55GO:0010193: response to ozone5.87E-04
56GO:0006098: pentose-phosphate shunt6.13E-04
57GO:0007166: cell surface receptor signaling pathway6.24E-04
58GO:0044419: interspecies interaction between organisms8.10E-04
59GO:0009945: radial axis specification8.10E-04
60GO:0010271: regulation of chlorophyll catabolic process8.10E-04
61GO:0015712: hexose phosphate transport8.10E-04
62GO:0051258: protein polymerization8.10E-04
63GO:0015012: heparan sulfate proteoglycan biosynthetic process8.10E-04
64GO:0009446: putrescine biosynthetic process8.10E-04
65GO:0015914: phospholipid transport8.10E-04
66GO:0010155: regulation of proton transport8.10E-04
67GO:0080151: positive regulation of salicylic acid mediated signaling pathway8.10E-04
68GO:0009838: abscission8.10E-04
69GO:0010618: aerenchyma formation8.10E-04
70GO:0006527: arginine catabolic process8.10E-04
71GO:0080181: lateral root branching8.10E-04
72GO:0006024: glycosaminoglycan biosynthetic process8.10E-04
73GO:0010115: regulation of abscisic acid biosynthetic process8.10E-04
74GO:0002240: response to molecule of oomycetes origin8.10E-04
75GO:0050832: defense response to fungus8.24E-04
76GO:0006468: protein phosphorylation1.17E-03
77GO:0034051: negative regulation of plant-type hypersensitive response1.31E-03
78GO:0080163: regulation of protein serine/threonine phosphatase activity1.31E-03
79GO:0035436: triose phosphate transmembrane transport1.31E-03
80GO:0045793: positive regulation of cell size1.31E-03
81GO:0015692: lead ion transport1.31E-03
82GO:0015695: organic cation transport1.31E-03
83GO:0015714: phosphoenolpyruvate transport1.31E-03
84GO:0080168: abscisic acid transport1.31E-03
85GO:0010498: proteasomal protein catabolic process1.31E-03
86GO:0006954: inflammatory response1.31E-03
87GO:0009266: response to temperature stimulus1.41E-03
88GO:0002237: response to molecule of bacterial origin1.41E-03
89GO:0009225: nucleotide-sugar metabolic process1.58E-03
90GO:0009867: jasmonic acid mediated signaling pathway1.76E-03
91GO:0010731: protein glutathionylation1.89E-03
92GO:0015696: ammonium transport1.89E-03
93GO:0051289: protein homotetramerization1.89E-03
94GO:0046513: ceramide biosynthetic process1.89E-03
95GO:0046836: glycolipid transport1.89E-03
96GO:0010116: positive regulation of abscisic acid biosynthetic process1.89E-03
97GO:0048194: Golgi vesicle budding1.89E-03
98GO:0043207: response to external biotic stimulus1.89E-03
99GO:0072583: clathrin-dependent endocytosis1.89E-03
100GO:0080147: root hair cell development1.95E-03
101GO:0015713: phosphoglycerate transport2.54E-03
102GO:0008295: spermidine biosynthetic process2.54E-03
103GO:0080142: regulation of salicylic acid biosynthetic process2.54E-03
104GO:0009694: jasmonic acid metabolic process2.54E-03
105GO:1901141: regulation of lignin biosynthetic process2.54E-03
106GO:0010109: regulation of photosynthesis2.54E-03
107GO:0009652: thigmotropism2.54E-03
108GO:0072488: ammonium transmembrane transport2.54E-03
109GO:0010107: potassium ion import2.54E-03
110GO:2000022: regulation of jasmonic acid mediated signaling pathway2.59E-03
111GO:0006012: galactose metabolic process2.83E-03
112GO:0006855: drug transmembrane transport2.96E-03
113GO:0009617: response to bacterium3.12E-03
114GO:0009435: NAD biosynthetic process3.25E-03
115GO:0018344: protein geranylgeranylation3.25E-03
116GO:0010225: response to UV-C3.25E-03
117GO:0009697: salicylic acid biosynthetic process3.25E-03
118GO:0034052: positive regulation of plant-type hypersensitive response3.25E-03
119GO:0009164: nucleoside catabolic process3.25E-03
120GO:0006486: protein glycosylation3.56E-03
121GO:0033365: protein localization to organelle4.02E-03
122GO:0006596: polyamine biosynthetic process4.02E-03
123GO:0018258: protein O-linked glycosylation via hydroxyproline4.02E-03
124GO:0006574: valine catabolic process4.02E-03
125GO:0009759: indole glucosinolate biosynthetic process4.02E-03
126GO:0010942: positive regulation of cell death4.02E-03
127GO:0010405: arabinogalactan protein metabolic process4.02E-03
128GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.02E-03
129GO:0010256: endomembrane system organization4.02E-03
130GO:0009942: longitudinal axis specification4.85E-03
131GO:0010310: regulation of hydrogen peroxide metabolic process4.85E-03
132GO:0042372: phylloquinone biosynthetic process4.85E-03
133GO:0045926: negative regulation of growth4.85E-03
134GO:0009612: response to mechanical stimulus4.85E-03
135GO:0009620: response to fungus4.97E-03
136GO:0006970: response to osmotic stress5.20E-03
137GO:0009624: response to nematode5.58E-03
138GO:1900057: positive regulation of leaf senescence5.73E-03
139GO:1902074: response to salt5.73E-03
140GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.73E-03
141GO:0009610: response to symbiotic fungus5.73E-03
142GO:0043090: amino acid import5.73E-03
143GO:0071446: cellular response to salicylic acid stimulus5.73E-03
144GO:0009723: response to ethylene5.80E-03
145GO:0009409: response to cold6.31E-03
146GO:0080167: response to karrikin6.45E-03
147GO:0043068: positive regulation of programmed cell death6.65E-03
148GO:0009787: regulation of abscisic acid-activated signaling pathway6.65E-03
149GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.65E-03
150GO:0009819: drought recovery6.65E-03
151GO:0009788: negative regulation of abscisic acid-activated signaling pathway7.34E-03
152GO:0009627: systemic acquired resistance7.76E-03
153GO:0009738: abscisic acid-activated signaling pathway7.94E-03
154GO:0019432: triglyceride biosynthetic process8.66E-03
155GO:0046916: cellular transition metal ion homeostasis8.66E-03
156GO:1900426: positive regulation of defense response to bacterium9.74E-03
157GO:0090332: stomatal closure9.74E-03
158GO:0048268: clathrin coat assembly9.74E-03
159GO:0048354: mucilage biosynthetic process involved in seed coat development9.74E-03
160GO:0010380: regulation of chlorophyll biosynthetic process9.74E-03
161GO:0009407: toxin catabolic process1.00E-02
162GO:0010119: regulation of stomatal movement1.05E-02
163GO:0019538: protein metabolic process1.09E-02
164GO:0009870: defense response signaling pathway, resistance gene-dependent1.09E-02
165GO:0006032: chitin catabolic process1.09E-02
166GO:0010629: negative regulation of gene expression1.09E-02
167GO:1903507: negative regulation of nucleic acid-templated transcription1.20E-02
168GO:0019684: photosynthesis, light reaction1.20E-02
169GO:0009089: lysine biosynthetic process via diaminopimelate1.20E-02
170GO:0072593: reactive oxygen species metabolic process1.20E-02
171GO:0006470: protein dephosphorylation1.33E-02
172GO:0010105: negative regulation of ethylene-activated signaling pathway1.33E-02
173GO:0000266: mitochondrial fission1.33E-02
174GO:0002213: defense response to insect1.33E-02
175GO:0006897: endocytosis1.37E-02
176GO:0055046: microgametogenesis1.45E-02
177GO:0034605: cellular response to heat1.58E-02
178GO:0007165: signal transduction1.58E-02
179GO:0009636: response to toxic substance1.68E-02
180GO:2000377: regulation of reactive oxygen species metabolic process1.99E-02
181GO:0009863: salicylic acid mediated signaling pathway1.99E-02
182GO:0016998: cell wall macromolecule catabolic process2.29E-02
183GO:0019722: calcium-mediated signaling2.76E-02
184GO:0009561: megagametogenesis2.76E-02
185GO:0070417: cellular response to cold2.92E-02
186GO:0000271: polysaccharide biosynthetic process3.08E-02
187GO:0000413: protein peptidyl-prolyl isomerization3.08E-02
188GO:0010118: stomatal movement3.08E-02
189GO:0042631: cellular response to water deprivation3.08E-02
190GO:0055114: oxidation-reduction process3.16E-02
191GO:0045489: pectin biosynthetic process3.25E-02
192GO:0006885: regulation of pH3.25E-02
193GO:0006520: cellular amino acid metabolic process3.25E-02
194GO:0016567: protein ubiquitination3.43E-02
195GO:0009749: response to glucose3.60E-02
196GO:0002229: defense response to oomycetes3.78E-02
197GO:0000302: response to reactive oxygen species3.78E-02
198GO:0071554: cell wall organization or biogenesis3.78E-02
199GO:0019761: glucosinolate biosynthetic process3.96E-02
200GO:0009408: response to heat4.15E-02
201GO:0009651: response to salt stress4.17E-02
202GO:0009790: embryo development4.18E-02
203GO:0006904: vesicle docking involved in exocytosis4.52E-02
204GO:0001666: response to hypoxia4.91E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0005212: structural constituent of eye lens0.00E+00
3GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
4GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
5GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
6GO:0008734: L-aspartate oxidase activity0.00E+00
7GO:0080131: hydroxyjasmonate sulfotransferase activity0.00E+00
8GO:0050373: UDP-arabinose 4-epimerase activity8.50E-05
9GO:0030552: cAMP binding1.27E-04
10GO:0030553: cGMP binding1.27E-04
11GO:0016301: kinase activity1.86E-04
12GO:0005216: ion channel activity2.01E-04
13GO:0003978: UDP-glucose 4-epimerase activity2.57E-04
14GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.57E-04
15GO:0004012: phospholipid-translocating ATPase activity2.57E-04
16GO:0005509: calcium ion binding2.58E-04
17GO:2001147: camalexin binding3.73E-04
18GO:0008792: arginine decarboxylase activity3.73E-04
19GO:0010285: L,L-diaminopimelate aminotransferase activity3.73E-04
20GO:0032050: clathrin heavy chain binding3.73E-04
21GO:2001227: quercitrin binding3.73E-04
22GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.73E-04
23GO:0004662: CAAX-protein geranylgeranyltransferase activity3.73E-04
24GO:0005249: voltage-gated potassium channel activity4.05E-04
25GO:0030551: cyclic nucleotide binding4.05E-04
26GO:0005544: calcium-dependent phospholipid binding4.18E-04
27GO:0019901: protein kinase binding5.38E-04
28GO:0015036: disulfide oxidoreductase activity8.10E-04
29GO:0048531: beta-1,3-galactosyltransferase activity8.10E-04
30GO:0050291: sphingosine N-acyltransferase activity8.10E-04
31GO:0047364: desulfoglucosinolate sulfotransferase activity8.10E-04
32GO:0015152: glucose-6-phosphate transmembrane transporter activity8.10E-04
33GO:0004568: chitinase activity8.43E-04
34GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.25E-03
35GO:0071917: triose-phosphate transmembrane transporter activity1.31E-03
36GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.31E-03
37GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.31E-03
38GO:0008146: sulfotransferase activity1.58E-03
39GO:0017077: oxidative phosphorylation uncoupler activity1.89E-03
40GO:0017089: glycolipid transporter activity1.89E-03
41GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.14E-03
42GO:0015120: phosphoglycerate transmembrane transporter activity2.54E-03
43GO:0051861: glycolipid binding2.54E-03
44GO:0004499: N,N-dimethylaniline monooxygenase activity3.07E-03
45GO:0005496: steroid binding3.25E-03
46GO:0047631: ADP-ribose diphosphatase activity3.25E-03
47GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.25E-03
48GO:0008519: ammonium transmembrane transporter activity4.02E-03
49GO:1990714: hydroxyproline O-galactosyltransferase activity4.02E-03
50GO:0000210: NAD+ diphosphatase activity4.02E-03
51GO:0005261: cation channel activity4.85E-03
52GO:0004144: diacylglycerol O-acyltransferase activity4.85E-03
53GO:0004656: procollagen-proline 4-dioxygenase activity4.85E-03
54GO:0019900: kinase binding4.85E-03
55GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.85E-03
56GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides4.85E-03
57GO:0003950: NAD+ ADP-ribosyltransferase activity4.85E-03
58GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.85E-03
59GO:0043295: glutathione binding5.73E-03
60GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity6.18E-03
61GO:0008483: transaminase activity6.18E-03
62GO:0004842: ubiquitin-protein transferase activity6.59E-03
63GO:0004033: aldo-keto reductase (NADP) activity6.65E-03
64GO:0004714: transmembrane receptor protein tyrosine kinase activity6.65E-03
65GO:0008271: secondary active sulfate transmembrane transporter activity7.64E-03
66GO:0030247: polysaccharide binding8.18E-03
67GO:0004674: protein serine/threonine kinase activity8.49E-03
68GO:0043565: sequence-specific DNA binding9.39E-03
69GO:0015238: drug transmembrane transporter activity9.54E-03
70GO:0047617: acyl-CoA hydrolase activity9.74E-03
71GO:0015297: antiporter activity1.06E-02
72GO:0005545: 1-phosphatidylinositol binding1.09E-02
73GO:0004864: protein phosphatase inhibitor activity1.09E-02
74GO:0016740: transferase activity1.19E-02
75GO:0008559: xenobiotic-transporting ATPase activity1.20E-02
76GO:0050661: NADP binding1.32E-02
77GO:0015116: sulfate transmembrane transporter activity1.33E-02
78GO:0008378: galactosyltransferase activity1.33E-02
79GO:0004364: glutathione transferase activity1.43E-02
80GO:0005315: inorganic phosphate transmembrane transporter activity1.45E-02
81GO:0015293: symporter activity1.68E-02
82GO:0005516: calmodulin binding1.70E-02
83GO:0004190: aspartic-type endopeptidase activity1.71E-02
84GO:0001046: core promoter sequence-specific DNA binding1.99E-02
85GO:0003714: transcription corepressor activity1.99E-02
86GO:0031418: L-ascorbic acid binding1.99E-02
87GO:0003954: NADH dehydrogenase activity1.99E-02
88GO:0005524: ATP binding2.05E-02
89GO:0033612: receptor serine/threonine kinase binding2.29E-02
90GO:0050660: flavin adenine dinucleotide binding2.35E-02
91GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.44E-02
92GO:0004497: monooxygenase activity2.56E-02
93GO:0005515: protein binding2.77E-02
94GO:0005451: monovalent cation:proton antiporter activity3.08E-02
95GO:0030276: clathrin binding3.25E-02
96GO:0003824: catalytic activity3.29E-02
97GO:0015299: solute:proton antiporter activity3.42E-02
98GO:0016758: transferase activity, transferring hexosyl groups3.49E-02
99GO:0004722: protein serine/threonine phosphatase activity3.59E-02
100GO:0004197: cysteine-type endopeptidase activity3.96E-02
101GO:0030170: pyridoxal phosphate binding3.98E-02
102GO:0015385: sodium:proton antiporter activity4.14E-02
103GO:0016757: transferase activity, transferring glycosyl groups4.28E-02
104GO:0009055: electron carrier activity4.52E-02
105GO:0016413: O-acetyltransferase activity4.71E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane1.08E-08
2GO:0005886: plasma membrane3.15E-06
3GO:0005953: CAAX-protein geranylgeranyltransferase complex3.73E-04
4GO:0031314: extrinsic component of mitochondrial inner membrane8.10E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane8.10E-04
6GO:0005901: caveola8.10E-04
7GO:0008287: protein serine/threonine phosphatase complex1.31E-03
8GO:0070062: extracellular exosome1.89E-03
9GO:0000164: protein phosphatase type 1 complex3.25E-03
10GO:0016363: nuclear matrix4.85E-03
11GO:0005887: integral component of plasma membrane5.27E-03
12GO:0032580: Golgi cisterna membrane5.81E-03
13GO:0005789: endoplasmic reticulum membrane8.18E-03
14GO:0005777: peroxisome1.07E-02
15GO:0030125: clathrin vesicle coat1.09E-02
16GO:0005795: Golgi stack1.71E-02
17GO:0000139: Golgi membrane1.76E-02
18GO:0005794: Golgi apparatus1.90E-02
19GO:0005741: mitochondrial outer membrane2.29E-02
20GO:0005905: clathrin-coated pit2.29E-02
21GO:0030136: clathrin-coated vesicle2.92E-02
22GO:0005770: late endosome3.25E-02
23GO:0005743: mitochondrial inner membrane3.79E-02
24GO:0000145: exocyst3.96E-02
25GO:0005737: cytoplasm4.40E-02
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Gene type



Gene DE type