co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G22200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1902009: positive regulation of toxin transport	0.00E+00
2	GO:0051553: flavone biosynthetic process	0.00E+00
3	GO:0071985: multivesicular body sorting pathway	0.00E+00
4	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
5	GO:1902001: fatty acid transmembrane transport	0.00E+00
6	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
7	GO:0005993: trehalose catabolic process	0.00E+00
8	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
9	GO:0080149: sucrose induced translational repression	0.00E+00
10	GO:0018063: cytochrome c-heme linkage	0.00E+00
11	GO:0010407: non-classical arabinogalactan protein metabolic process	0.00E+00
12	GO:0016559: peroxisome fission	3.37E-06
13	GO:0015031: protein transport	5.19E-05
14	GO:0030150: protein import into mitochondrial matrix	5.24E-05
15	GO:0006605: protein targeting	1.82E-04
16	GO:0006102: isocitrate metabolic process	1.82E-04
17	GO:0006623: protein targeting to vacuole	1.83E-04
18	GO:0000077: DNA damage checkpoint	2.13E-04
19	GO:1990641: response to iron ion starvation	2.13E-04
20	GO:0043182: vacuolar sequestering of sodium ion	2.13E-04
21	GO:0010230: alternative respiration	2.13E-04
22	GO:0016192: vesicle-mediated transport	3.97E-04
23	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.76E-04
24	GO:0071668: plant-type cell wall assembly	4.76E-04
25	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.76E-04
26	GO:0055088: lipid homeostasis	4.76E-04
27	GO:0040020: regulation of meiotic nuclear division	4.76E-04
28	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	4.76E-04
29	GO:0015908: fatty acid transport	4.76E-04
30	GO:0006101: citrate metabolic process	4.76E-04
31	GO:0000266: mitochondrial fission	5.07E-04
32	GO:0006099: tricarboxylic acid cycle	6.72E-04
33	GO:0090351: seedling development	7.24E-04
34	GO:0044375: regulation of peroxisome size	7.74E-04
35	GO:0006065: UDP-glucuronate biosynthetic process	7.74E-04
36	GO:0009410: response to xenobiotic stimulus	7.74E-04
37	GO:0052546: cell wall pectin metabolic process	7.74E-04
38	GO:0080163: regulation of protein serine/threonine phosphatase activity	7.74E-04
39	GO:0051707: response to other organism	8.74E-04
40	GO:0071323: cellular response to chitin	1.10E-03
41	GO:0080024: indolebutyric acid metabolic process	1.10E-03
42	GO:0055070: copper ion homeostasis	1.10E-03
43	GO:0001676: long-chain fatty acid metabolic process	1.10E-03
44	GO:0055089: fatty acid homeostasis	1.10E-03
45	GO:0051639: actin filament network formation	1.10E-03
46	GO:0002239: response to oomycetes	1.10E-03
47	GO:0051764: actin crosslink formation	1.47E-03
48	GO:0006621: protein retention in ER lumen	1.47E-03
49	GO:0015867: ATP transport	1.47E-03
50	GO:1901002: positive regulation of response to salt stress	1.47E-03
51	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.87E-03
52	GO:0006097: glyoxylate cycle	1.87E-03
53	GO:0009229: thiamine diphosphate biosynthetic process	1.87E-03
54	GO:0006014: D-ribose metabolic process	2.31E-03
55	GO:0015866: ADP transport	2.31E-03
56	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.31E-03
57	GO:0009228: thiamine biosynthetic process	2.31E-03
58	GO:0045040: protein import into mitochondrial outer membrane	2.31E-03
59	GO:0047484: regulation of response to osmotic stress	2.31E-03
60	GO:1900425: negative regulation of defense response to bacterium	2.31E-03
61	GO:0017148: negative regulation of translation	2.77E-03
62	GO:0006333: chromatin assembly or disassembly	3.26E-03
63	GO:0010044: response to aluminum ion	3.26E-03
64	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.26E-03
65	GO:2000014: regulation of endosperm development	3.26E-03
66	GO:1900057: positive regulation of leaf senescence	3.26E-03
67	GO:0006888: ER to Golgi vesicle-mediated transport	3.61E-03
68	GO:0045010: actin nucleation	3.78E-03
69	GO:0031540: regulation of anthocyanin biosynthetic process	3.78E-03
70	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.78E-03
71	GO:0006997: nucleus organization	4.33E-03
72	GO:0017004: cytochrome complex assembly	4.33E-03
73	GO:0010208: pollen wall assembly	4.33E-03
74	GO:0010112: regulation of systemic acquired resistance	4.90E-03
75	GO:0000902: cell morphogenesis	4.90E-03
76	GO:0007338: single fertilization	4.90E-03
77	GO:0010332: response to gamma radiation	4.90E-03
78	GO:0008202: steroid metabolic process	5.50E-03
79	GO:0090332: stomatal closure	5.50E-03
80	GO:0009086: methionine biosynthetic process	5.50E-03
81	GO:0006631: fatty acid metabolic process	6.02E-03
82	GO:0000103: sulfate assimilation	6.12E-03
83	GO:0009688: abscisic acid biosynthetic process	6.12E-03
84	GO:0051555: flavonol biosynthetic process	6.12E-03
85	GO:0019684: photosynthesis, light reaction	6.77E-03
86	GO:0045037: protein import into chloroplast stroma	7.44E-03
87	GO:0006626: protein targeting to mitochondrion	8.13E-03
88	GO:0030036: actin cytoskeleton organization	8.13E-03
89	GO:2000012: regulation of auxin polar transport	8.13E-03
90	GO:0007015: actin filament organization	8.84E-03
91	GO:0002237: response to molecule of bacterial origin	8.84E-03
92	GO:0010224: response to UV-B	9.11E-03
93	GO:0007033: vacuole organization	9.58E-03
94	GO:0007031: peroxisome organization	9.58E-03
95	GO:0006636: unsaturated fatty acid biosynthetic process	1.03E-02
96	GO:0000162: tryptophan biosynthetic process	1.03E-02
97	GO:0051017: actin filament bundle assembly	1.11E-02
98	GO:0006289: nucleotide-excision repair	1.11E-02
99	GO:0000027: ribosomal large subunit assembly	1.11E-02
100	GO:0009863: salicylic acid mediated signaling pathway	1.11E-02
101	GO:0009620: response to fungus	1.15E-02
102	GO:0006886: intracellular protein transport	1.18E-02
103	GO:0006334: nucleosome assembly	1.27E-02
104	GO:0009269: response to desiccation	1.27E-02
105	GO:0007005: mitochondrion organization	1.36E-02
106	GO:0031348: negative regulation of defense response	1.36E-02
107	GO:0009814: defense response, incompatible interaction	1.36E-02
108	GO:0009411: response to UV	1.45E-02
109	GO:0010584: pollen exine formation	1.53E-02
110	GO:0010118: stomatal movement	1.72E-02
111	GO:0006662: glycerol ether metabolic process	1.81E-02
112	GO:0010182: sugar mediated signaling pathway	1.81E-02
113	GO:0009960: endosperm development	1.81E-02
114	GO:0019252: starch biosynthetic process	2.00E-02
115	GO:0006635: fatty acid beta-oxidation	2.10E-02
116	GO:0071554: cell wall organization or biogenesis	2.10E-02
117	GO:0002229: defense response to oomycetes	2.10E-02
118	GO:0010193: response to ozone	2.10E-02
119	GO:0010150: leaf senescence	2.18E-02
120	GO:0032502: developmental process	2.20E-02
121	GO:0006979: response to oxidative stress	2.33E-02
122	GO:0009567: double fertilization forming a zygote and endosperm	2.41E-02
123	GO:0006470: protein dephosphorylation	2.49E-02
124	GO:0008380: RNA splicing	2.60E-02
125	GO:0051607: defense response to virus	2.62E-02
126	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.84E-02
127	GO:0009816: defense response to bacterium, incompatible interaction	2.84E-02
128	GO:0009738: abscisic acid-activated signaling pathway	2.93E-02
129	GO:0009627: systemic acquired resistance	2.95E-02
130	GO:0009817: defense response to fungus, incompatible interaction	3.30E-02
131	GO:0048767: root hair elongation	3.42E-02
132	GO:0009813: flavonoid biosynthetic process	3.42E-02
133	GO:0006499: N-terminal protein myristoylation	3.54E-02
134	GO:0009860: pollen tube growth	3.63E-02
135	GO:0000724: double-strand break repair via homologous recombination	3.78E-02
136	GO:0045087: innate immune response	3.91E-02
137	GO:0034599: cellular response to oxidative stress	4.03E-02
138	GO:0006839: mitochondrial transport	4.29E-02
139	GO:0010114: response to red light	4.68E-02
140	GO:0009744: response to sucrose	4.68E-02
141	GO:0000209: protein polyubiquitination	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0005046: KDEL sequence binding	0.00E+00
3	GO:0034338: short-chain carboxylesterase activity	0.00E+00
4	GO:0033759: flavone synthase activity	0.00E+00
5	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
6	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
7	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
8	GO:0008320: protein transmembrane transporter activity	1.42E-04
9	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.13E-04
10	GO:0009000: selenocysteine lyase activity	2.13E-04
11	GO:0015245: fatty acid transporter activity	2.13E-04
12	GO:0016920: pyroglutamyl-peptidase activity	2.13E-04
13	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.13E-04
14	GO:0015927: trehalase activity	2.13E-04
15	GO:0030942: endoplasmic reticulum signal peptide binding	2.13E-04
16	GO:0032266: phosphatidylinositol-3-phosphate binding	2.13E-04
17	GO:0003994: aconitate hydratase activity	4.76E-04
18	GO:0000774: adenyl-nucleotide exchange factor activity	4.76E-04
19	GO:0032934: sterol binding	4.76E-04
20	GO:0050736: O-malonyltransferase activity	4.76E-04
21	GO:0048531: beta-1,3-galactosyltransferase activity	4.76E-04
22	GO:0003979: UDP-glucose 6-dehydrogenase activity	7.74E-04
23	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	7.74E-04
24	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.10E-03
25	GO:0035529: NADH pyrophosphatase activity	1.10E-03
26	GO:0030527: structural constituent of chromatin	1.10E-03
27	GO:0004834: tryptophan synthase activity	1.47E-03
28	GO:0046923: ER retention sequence binding	1.47E-03
29	GO:0047631: ADP-ribose diphosphatase activity	1.87E-03
30	GO:0030151: molybdenum ion binding	1.87E-03
31	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.87E-03
32	GO:0004623: phospholipase A2 activity	1.87E-03
33	GO:0000210: NAD+ diphosphatase activity	2.31E-03
34	GO:0042803: protein homodimerization activity	2.61E-03
35	GO:0005347: ATP transmembrane transporter activity	2.77E-03
36	GO:0004656: procollagen-proline 4-dioxygenase activity	2.77E-03
37	GO:0015217: ADP transmembrane transporter activity	2.77E-03
38	GO:0102391: decanoate--CoA ligase activity	2.77E-03
39	GO:0004747: ribokinase activity	2.77E-03
40	GO:0004467: long-chain fatty acid-CoA ligase activity	3.26E-03
41	GO:0004806: triglyceride lipase activity	3.61E-03
42	GO:0008312: 7S RNA binding	3.78E-03
43	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.78E-03
44	GO:0008865: fructokinase activity	3.78E-03
45	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.78E-03
46	GO:0052747: sinapyl alcohol dehydrogenase activity	3.78E-03
47	GO:0008142: oxysterol binding	4.33E-03
48	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	4.90E-03
49	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.07E-03
50	GO:0030234: enzyme regulator activity	6.12E-03
51	GO:0004864: protein phosphatase inhibitor activity	6.12E-03
52	GO:0003682: chromatin binding	7.38E-03
53	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.44E-03
54	GO:0008378: galactosyltransferase activity	7.44E-03
55	GO:0051287: NAD binding	7.91E-03
56	GO:0004022: alcohol dehydrogenase (NAD) activity	8.13E-03
57	GO:0015266: protein channel activity	8.13E-03
58	GO:0008061: chitin binding	9.58E-03
59	GO:0003712: transcription cofactor activity	9.58E-03
60	GO:0004725: protein tyrosine phosphatase activity	1.03E-02
61	GO:0051536: iron-sulfur cluster binding	1.11E-02
62	GO:0031418: L-ascorbic acid binding	1.11E-02
63	GO:0043130: ubiquitin binding	1.11E-02
64	GO:0051087: chaperone binding	1.19E-02
65	GO:0035251: UDP-glucosyltransferase activity	1.27E-02
66	GO:0015035: protein disulfide oxidoreductase activity	1.29E-02
67	GO:0016758: transferase activity, transferring hexosyl groups	1.53E-02
68	GO:0047134: protein-disulfide reductase activity	1.62E-02
69	GO:0005102: receptor binding	1.62E-02
70	GO:0030170: pyridoxal phosphate binding	1.75E-02
71	GO:0004791: thioredoxin-disulfide reductase activity	1.91E-02
72	GO:0050662: coenzyme binding	1.91E-02
73	GO:0004872: receptor activity	2.00E-02
74	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.31E-02
75	GO:0051015: actin filament binding	2.31E-02
76	GO:0016413: O-acetyltransferase activity	2.62E-02
77	GO:0042802: identical protein binding	2.77E-02
78	GO:0030247: polysaccharide binding	3.07E-02
79	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.30E-02
80	GO:0046982: protein heterodimerization activity	3.31E-02
81	GO:0016740: transferase activity	3.90E-02
82	GO:0042393: histone binding	4.29E-02
83	GO:0051539: 4 iron, 4 sulfur cluster binding	4.29E-02

Rank	GO Term	Adjusted P value
1	GO:0005801: cis-Golgi network	1.08E-04
2	GO:0001405: presequence translocase-associated import motor	2.13E-04
3	GO:0045252: oxoglutarate dehydrogenase complex	2.13E-04
4	GO:0005779: integral component of peroxisomal membrane	2.25E-04
5	GO:0005778: peroxisomal membrane	2.85E-04
6	GO:0030665: clathrin-coated vesicle membrane	3.26E-04
7	GO:0017119: Golgi transport complex	3.82E-04
8	GO:0005789: endoplasmic reticulum membrane	3.94E-04
9	GO:0000814: ESCRT II complex	4.76E-04
10	GO:0030134: ER to Golgi transport vesicle	4.76E-04
11	GO:0005829: cytosol	5.61E-04
12	GO:0042406: extrinsic component of endoplasmic reticulum membrane	7.74E-04
13	GO:0031902: late endosome membrane	7.90E-04
14	GO:0005741: mitochondrial outer membrane	1.07E-03
15	GO:0032432: actin filament bundle	1.10E-03
16	GO:0030658: transport vesicle membrane	1.10E-03
17	GO:0005794: Golgi apparatus	1.16E-03
18	GO:0000164: protein phosphatase type 1 complex	1.87E-03
19	GO:0005777: peroxisome	2.53E-03
20	GO:0005885: Arp2/3 protein complex	2.77E-03
21	GO:0005743: mitochondrial inner membrane	2.99E-03
22	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.26E-03
23	GO:0000139: Golgi membrane	3.53E-03
24	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.33E-03
25	GO:0005742: mitochondrial outer membrane translocase complex	4.33E-03
26	GO:0008540: proteasome regulatory particle, base subcomplex	5.50E-03
27	GO:0005884: actin filament	6.77E-03
28	GO:0031307: integral component of mitochondrial outer membrane	7.44E-03
29	GO:0016021: integral component of membrane	8.56E-03
30	GO:0005769: early endosome	1.03E-02
31	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.53E-02
32	GO:0009543: chloroplast thylakoid lumen	1.58E-02
33	GO:0005623: cell	1.62E-02
34	GO:0005770: late endosome	1.81E-02
35	GO:0019898: extrinsic component of membrane	2.00E-02
36	GO:0009504: cell plate	2.00E-02
37	GO:0031965: nuclear membrane	2.00E-02
38	GO:0000785: chromatin	2.20E-02
39	GO:0032580: Golgi cisterna membrane	2.41E-02
40	GO:0000325: plant-type vacuole	3.66E-02
41	GO:0005737: cytoplasm	4.45E-02