GO Enrichment Analysis of Co-expressed Genes with
AT1G22170
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 2 | GO:0010392: galactoglucomannan metabolic process | 0.00E+00 |
| 3 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 4 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 5 | GO:0051070: galactomannan biosynthetic process | 0.00E+00 |
| 6 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 7 | GO:0042407: cristae formation | 0.00E+00 |
| 8 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 9 | GO:0005983: starch catabolic process | 2.57E-05 |
| 10 | GO:0042793: transcription from plastid promoter | 9.17E-05 |
| 11 | GO:0010442: guard cell morphogenesis | 2.36E-04 |
| 12 | GO:0010480: microsporocyte differentiation | 2.36E-04 |
| 13 | GO:0042759: long-chain fatty acid biosynthetic process | 2.36E-04 |
| 14 | GO:0000025: maltose catabolic process | 2.36E-04 |
| 15 | GO:0005980: glycogen catabolic process | 2.36E-04 |
| 16 | GO:0030198: extracellular matrix organization | 2.36E-04 |
| 17 | GO:0019388: galactose catabolic process | 5.24E-04 |
| 18 | GO:0018026: peptidyl-lysine monomethylation | 5.24E-04 |
| 19 | GO:1900033: negative regulation of trichome patterning | 5.24E-04 |
| 20 | GO:0009786: regulation of asymmetric cell division | 5.24E-04 |
| 21 | GO:0031648: protein destabilization | 5.24E-04 |
| 22 | GO:2000123: positive regulation of stomatal complex development | 5.24E-04 |
| 23 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 5.24E-04 |
| 24 | GO:0052541: plant-type cell wall cellulose metabolic process | 5.24E-04 |
| 25 | GO:0006423: cysteinyl-tRNA aminoacylation | 5.24E-04 |
| 26 | GO:0006006: glucose metabolic process | 6.63E-04 |
| 27 | GO:0010020: chloroplast fission | 7.46E-04 |
| 28 | GO:0006696: ergosterol biosynthetic process | 8.52E-04 |
| 29 | GO:0006631: fatty acid metabolic process | 9.48E-04 |
| 30 | GO:0009640: photomorphogenesis | 1.05E-03 |
| 31 | GO:0010731: protein glutathionylation | 1.21E-03 |
| 32 | GO:0046739: transport of virus in multicellular host | 1.21E-03 |
| 33 | GO:0009590: detection of gravity | 1.21E-03 |
| 34 | GO:0007231: osmosensory signaling pathway | 1.21E-03 |
| 35 | GO:0009102: biotin biosynthetic process | 1.21E-03 |
| 36 | GO:0006241: CTP biosynthetic process | 1.21E-03 |
| 37 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.21E-03 |
| 38 | GO:0006165: nucleoside diphosphate phosphorylation | 1.21E-03 |
| 39 | GO:0006228: UTP biosynthetic process | 1.21E-03 |
| 40 | GO:0009647: skotomorphogenesis | 1.21E-03 |
| 41 | GO:2000038: regulation of stomatal complex development | 1.62E-03 |
| 42 | GO:0006808: regulation of nitrogen utilization | 1.62E-03 |
| 43 | GO:0048629: trichome patterning | 1.62E-03 |
| 44 | GO:0006183: GTP biosynthetic process | 1.62E-03 |
| 45 | GO:0033500: carbohydrate homeostasis | 1.62E-03 |
| 46 | GO:0009658: chloroplast organization | 1.67E-03 |
| 47 | GO:0048497: maintenance of floral organ identity | 2.07E-03 |
| 48 | GO:0007094: mitotic spindle assembly checkpoint | 2.07E-03 |
| 49 | GO:0010375: stomatal complex patterning | 2.07E-03 |
| 50 | GO:0019252: starch biosynthetic process | 2.31E-03 |
| 51 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.47E-03 |
| 52 | GO:0033365: protein localization to organelle | 2.55E-03 |
| 53 | GO:0010405: arabinogalactan protein metabolic process | 2.55E-03 |
| 54 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.55E-03 |
| 55 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.55E-03 |
| 56 | GO:0009913: epidermal cell differentiation | 2.55E-03 |
| 57 | GO:1902456: regulation of stomatal opening | 2.55E-03 |
| 58 | GO:0009742: brassinosteroid mediated signaling pathway | 2.56E-03 |
| 59 | GO:0006508: proteolysis | 3.04E-03 |
| 60 | GO:0006458: 'de novo' protein folding | 3.06E-03 |
| 61 | GO:0030488: tRNA methylation | 3.06E-03 |
| 62 | GO:0042026: protein refolding | 3.06E-03 |
| 63 | GO:0010027: thylakoid membrane organization | 3.56E-03 |
| 64 | GO:0010444: guard mother cell differentiation | 3.61E-03 |
| 65 | GO:0048437: floral organ development | 3.61E-03 |
| 66 | GO:0016042: lipid catabolic process | 4.01E-03 |
| 67 | GO:0000105: histidine biosynthetic process | 4.19E-03 |
| 68 | GO:0009231: riboflavin biosynthetic process | 4.19E-03 |
| 69 | GO:0005978: glycogen biosynthetic process | 4.19E-03 |
| 70 | GO:0015995: chlorophyll biosynthetic process | 4.19E-03 |
| 71 | GO:0006633: fatty acid biosynthetic process | 4.23E-03 |
| 72 | GO:0040008: regulation of growth | 4.49E-03 |
| 73 | GO:0009817: defense response to fungus, incompatible interaction | 4.64E-03 |
| 74 | GO:0006526: arginine biosynthetic process | 4.79E-03 |
| 75 | GO:0032544: plastid translation | 4.79E-03 |
| 76 | GO:0010497: plasmodesmata-mediated intercellular transport | 4.79E-03 |
| 77 | GO:0000160: phosphorelay signal transduction system | 4.87E-03 |
| 78 | GO:0009813: flavonoid biosynthetic process | 4.87E-03 |
| 79 | GO:0010206: photosystem II repair | 5.43E-03 |
| 80 | GO:0000902: cell morphogenesis | 5.43E-03 |
| 81 | GO:0051865: protein autoubiquitination | 5.43E-03 |
| 82 | GO:0007346: regulation of mitotic cell cycle | 6.09E-03 |
| 83 | GO:0043067: regulation of programmed cell death | 6.09E-03 |
| 84 | GO:0048829: root cap development | 6.78E-03 |
| 85 | GO:0009641: shade avoidance | 6.78E-03 |
| 86 | GO:0006949: syncytium formation | 6.78E-03 |
| 87 | GO:0010192: mucilage biosynthetic process | 6.78E-03 |
| 88 | GO:0009073: aromatic amino acid family biosynthetic process | 7.50E-03 |
| 89 | GO:0048229: gametophyte development | 7.50E-03 |
| 90 | GO:0006816: calcium ion transport | 7.50E-03 |
| 91 | GO:0012501: programmed cell death | 8.25E-03 |
| 92 | GO:0010628: positive regulation of gene expression | 9.02E-03 |
| 93 | GO:0050826: response to freezing | 9.02E-03 |
| 94 | GO:0010075: regulation of meristem growth | 9.02E-03 |
| 95 | GO:2000012: regulation of auxin polar transport | 9.02E-03 |
| 96 | GO:0010102: lateral root morphogenesis | 9.02E-03 |
| 97 | GO:0007034: vacuolar transport | 9.82E-03 |
| 98 | GO:0009266: response to temperature stimulus | 9.82E-03 |
| 99 | GO:0009934: regulation of meristem structural organization | 9.82E-03 |
| 100 | GO:0009736: cytokinin-activated signaling pathway | 1.02E-02 |
| 101 | GO:0090351: seedling development | 1.06E-02 |
| 102 | GO:0070588: calcium ion transmembrane transport | 1.06E-02 |
| 103 | GO:0010025: wax biosynthetic process | 1.15E-02 |
| 104 | GO:0006071: glycerol metabolic process | 1.15E-02 |
| 105 | GO:0000162: tryptophan biosynthetic process | 1.15E-02 |
| 106 | GO:0019953: sexual reproduction | 1.32E-02 |
| 107 | GO:0010026: trichome differentiation | 1.32E-02 |
| 108 | GO:0009793: embryo development ending in seed dormancy | 1.34E-02 |
| 109 | GO:0009740: gibberellic acid mediated signaling pathway | 1.37E-02 |
| 110 | GO:0048511: rhythmic process | 1.42E-02 |
| 111 | GO:0061077: chaperone-mediated protein folding | 1.42E-02 |
| 112 | GO:0048278: vesicle docking | 1.42E-02 |
| 113 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.51E-02 |
| 114 | GO:0030245: cellulose catabolic process | 1.51E-02 |
| 115 | GO:0009411: response to UV | 1.61E-02 |
| 116 | GO:0010214: seed coat development | 1.70E-02 |
| 117 | GO:0006629: lipid metabolic process | 1.79E-02 |
| 118 | GO:0000413: protein peptidyl-prolyl isomerization | 1.91E-02 |
| 119 | GO:0010118: stomatal movement | 1.91E-02 |
| 120 | GO:0048653: anther development | 1.91E-02 |
| 121 | GO:0009058: biosynthetic process | 1.93E-02 |
| 122 | GO:0010197: polar nucleus fusion | 2.01E-02 |
| 123 | GO:0009741: response to brassinosteroid | 2.01E-02 |
| 124 | GO:0006520: cellular amino acid metabolic process | 2.01E-02 |
| 125 | GO:0048544: recognition of pollen | 2.12E-02 |
| 126 | GO:0061025: membrane fusion | 2.12E-02 |
| 127 | GO:0042752: regulation of circadian rhythm | 2.12E-02 |
| 128 | GO:0009790: embryo development | 2.14E-02 |
| 129 | GO:0048825: cotyledon development | 2.23E-02 |
| 130 | GO:0032502: developmental process | 2.45E-02 |
| 131 | GO:0010583: response to cyclopentenone | 2.45E-02 |
| 132 | GO:0007623: circadian rhythm | 2.53E-02 |
| 133 | GO:0030163: protein catabolic process | 2.56E-02 |
| 134 | GO:0009828: plant-type cell wall loosening | 2.68E-02 |
| 135 | GO:0009567: double fertilization forming a zygote and endosperm | 2.68E-02 |
| 136 | GO:0007267: cell-cell signaling | 2.80E-02 |
| 137 | GO:0030154: cell differentiation | 3.26E-02 |
| 138 | GO:0009735: response to cytokinin | 3.28E-02 |
| 139 | GO:0006906: vesicle fusion | 3.29E-02 |
| 140 | GO:0009826: unidimensional cell growth | 3.76E-02 |
| 141 | GO:0010311: lateral root formation | 3.80E-02 |
| 142 | GO:0009723: response to ethylene | 4.51E-02 |
| 143 | GO:0006839: mitochondrial transport | 4.76E-02 |
| 144 | GO:0030001: metal ion transport | 4.76E-02 |
| 145 | GO:0006887: exocytosis | 4.90E-02 |
| 146 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 2 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 3 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 4 | GO:0005201: extracellular matrix structural constituent | 0.00E+00 |
| 5 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 6 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 7 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 8 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 9 | GO:0051060: pullulanase activity | 0.00E+00 |
| 10 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 11 | GO:0005504: fatty acid binding | 9.47E-06 |
| 12 | GO:0045430: chalcone isomerase activity | 3.91E-05 |
| 13 | GO:0004645: phosphorylase activity | 2.36E-04 |
| 14 | GO:0009374: biotin binding | 2.36E-04 |
| 15 | GO:0019203: carbohydrate phosphatase activity | 2.36E-04 |
| 16 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.36E-04 |
| 17 | GO:0050139: nicotinate-N-glucosyltransferase activity | 2.36E-04 |
| 18 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 2.36E-04 |
| 19 | GO:0008184: glycogen phosphorylase activity | 2.36E-04 |
| 20 | GO:0050308: sugar-phosphatase activity | 2.36E-04 |
| 21 | GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity | 2.36E-04 |
| 22 | GO:0004134: 4-alpha-glucanotransferase activity | 2.36E-04 |
| 23 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 5.24E-04 |
| 24 | GO:0004614: phosphoglucomutase activity | 5.24E-04 |
| 25 | GO:0004817: cysteine-tRNA ligase activity | 5.24E-04 |
| 26 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.24E-04 |
| 27 | GO:0016630: protochlorophyllide reductase activity | 5.24E-04 |
| 28 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 8.52E-04 |
| 29 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 8.52E-04 |
| 30 | GO:0070330: aromatase activity | 8.52E-04 |
| 31 | GO:0017150: tRNA dihydrouridine synthase activity | 8.52E-04 |
| 32 | GO:0004550: nucleoside diphosphate kinase activity | 1.21E-03 |
| 33 | GO:0043023: ribosomal large subunit binding | 1.21E-03 |
| 34 | GO:0016851: magnesium chelatase activity | 1.21E-03 |
| 35 | GO:0004176: ATP-dependent peptidase activity | 1.23E-03 |
| 36 | GO:0016279: protein-lysine N-methyltransferase activity | 1.62E-03 |
| 37 | GO:0019199: transmembrane receptor protein kinase activity | 1.62E-03 |
| 38 | GO:0001085: RNA polymerase II transcription factor binding | 2.00E-03 |
| 39 | GO:0018685: alkane 1-monooxygenase activity | 2.07E-03 |
| 40 | GO:0003989: acetyl-CoA carboxylase activity | 2.07E-03 |
| 41 | GO:0004556: alpha-amylase activity | 2.55E-03 |
| 42 | GO:2001070: starch binding | 2.55E-03 |
| 43 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.55E-03 |
| 44 | GO:0000156: phosphorelay response regulator activity | 2.81E-03 |
| 45 | GO:0008237: metallopeptidase activity | 3.17E-03 |
| 46 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.73E-03 |
| 47 | GO:0030674: protein binding, bridging | 4.19E-03 |
| 48 | GO:0046983: protein dimerization activity | 4.60E-03 |
| 49 | GO:0009055: electron carrier activity | 4.66E-03 |
| 50 | GO:0008173: RNA methyltransferase activity | 4.79E-03 |
| 51 | GO:0005507: copper ion binding | 4.80E-03 |
| 52 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 5.36E-03 |
| 53 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 5.43E-03 |
| 54 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 5.43E-03 |
| 55 | GO:0044183: protein binding involved in protein folding | 7.50E-03 |
| 56 | GO:0047372: acylglycerol lipase activity | 7.50E-03 |
| 57 | GO:0043621: protein self-association | 8.19E-03 |
| 58 | GO:0008378: galactosyltransferase activity | 8.25E-03 |
| 59 | GO:0005198: structural molecule activity | 8.51E-03 |
| 60 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.84E-03 |
| 61 | GO:0005262: calcium channel activity | 9.02E-03 |
| 62 | GO:0015266: protein channel activity | 9.02E-03 |
| 63 | GO:0004190: aspartic-type endopeptidase activity | 1.06E-02 |
| 64 | GO:0016298: lipase activity | 1.06E-02 |
| 65 | GO:0052689: carboxylic ester hydrolase activity | 1.24E-02 |
| 66 | GO:0005528: FK506 binding | 1.24E-02 |
| 67 | GO:0043424: protein histidine kinase binding | 1.32E-02 |
| 68 | GO:0033612: receptor serine/threonine kinase binding | 1.42E-02 |
| 69 | GO:0008810: cellulase activity | 1.61E-02 |
| 70 | GO:0003727: single-stranded RNA binding | 1.70E-02 |
| 71 | GO:0019901: protein kinase binding | 2.23E-02 |
| 72 | GO:0016757: transferase activity, transferring glycosyl groups | 2.78E-02 |
| 73 | GO:0005200: structural constituent of cytoskeleton | 2.80E-02 |
| 74 | GO:0016597: amino acid binding | 2.92E-02 |
| 75 | GO:0005515: protein binding | 2.94E-02 |
| 76 | GO:0016887: ATPase activity | 3.10E-02 |
| 77 | GO:0008236: serine-type peptidase activity | 3.54E-02 |
| 78 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.67E-02 |
| 79 | GO:0005096: GTPase activator activity | 3.80E-02 |
| 80 | GO:0000287: magnesium ion binding | 3.83E-02 |
| 81 | GO:0004222: metalloendopeptidase activity | 3.93E-02 |
| 82 | GO:0016788: hydrolase activity, acting on ester bonds | 3.98E-02 |
| 83 | GO:0003682: chromatin binding | 4.12E-02 |
| 84 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4.34E-02 |
| 85 | GO:0000149: SNARE binding | 4.62E-02 |
| 86 | GO:0016740: transferase activity | 4.68E-02 |
| 87 | GO:0008233: peptidase activity | 4.74E-02 |
| 88 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.24E-10 |
| 2 | GO:0009570: chloroplast stroma | 2.10E-10 |
| 3 | GO:0009534: chloroplast thylakoid | 5.58E-08 |
| 4 | GO:0009941: chloroplast envelope | 2.37E-07 |
| 5 | GO:0046658: anchored component of plasma membrane | 2.37E-04 |
| 6 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 5.24E-04 |
| 7 | GO:0009508: plastid chromosome | 6.63E-04 |
| 8 | GO:0010007: magnesium chelatase complex | 8.52E-04 |
| 9 | GO:0030139: endocytic vesicle | 8.52E-04 |
| 10 | GO:0009317: acetyl-CoA carboxylase complex | 8.52E-04 |
| 11 | GO:0009536: plastid | 1.16E-03 |
| 12 | GO:0032585: multivesicular body membrane | 1.21E-03 |
| 13 | GO:0031225: anchored component of membrane | 1.55E-03 |
| 14 | GO:0005828: kinetochore microtubule | 1.62E-03 |
| 15 | GO:0000776: kinetochore | 2.07E-03 |
| 16 | GO:0000777: condensed chromosome kinetochore | 3.06E-03 |
| 17 | GO:0000815: ESCRT III complex | 3.06E-03 |
| 18 | GO:0010369: chromocenter | 3.06E-03 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 3.16E-03 |
| 20 | GO:0009295: nucleoid | 3.17E-03 |
| 21 | GO:0009986: cell surface | 3.61E-03 |
| 22 | GO:0009533: chloroplast stromal thylakoid | 3.61E-03 |
| 23 | GO:0005667: transcription factor complex | 3.97E-03 |
| 24 | GO:0009501: amyloplast | 4.19E-03 |
| 25 | GO:0005876: spindle microtubule | 6.09E-03 |
| 26 | GO:0031977: thylakoid lumen | 6.98E-03 |
| 27 | GO:0090404: pollen tube tip | 7.50E-03 |
| 28 | GO:0009579: thylakoid | 1.31E-02 |
| 29 | GO:0042651: thylakoid membrane | 1.32E-02 |
| 30 | GO:0009532: plastid stroma | 1.42E-02 |
| 31 | GO:0015629: actin cytoskeleton | 1.61E-02 |
| 32 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.70E-02 |
| 33 | GO:0010319: stromule | 2.80E-02 |
| 34 | GO:0031201: SNARE complex | 4.90E-02 |