Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with


RankGO TermAdjusted P value
1GO:0019447: D-cysteine catabolic process0.00E+00
2GO:1901333: positive regulation of lateral root development0.00E+00
3GO:0090610: bundle sheath cell fate specification1.54E-06
4GO:0050891: multicellular organismal water homeostasis1.54E-06
5GO:0010376: stomatal complex formation1.54E-06
6GO:0010424: DNA methylation on cytosine within a CG sequence4.37E-06
7GO:0061087: positive regulation of histone H3-K27 methylation4.37E-06
8GO:0010069: zygote asymmetric cytokinesis in embryo sac4.37E-06
9GO:0010235: guard mother cell cytokinesis4.37E-06
10GO:0009629: response to gravity4.37E-06
11GO:1902806: regulation of cell cycle G1/S phase transition8.33E-06
12GO:0090436: leaf pavement cell development8.33E-06
13GO:1902584: positive regulation of response to water deprivation1.91E-05
14GO:1901002: positive regulation of response to salt stress1.91E-05
15GO:0009554: megasporogenesis4.09E-05
16GO:2000037: regulation of stomatal complex patterning4.09E-05
17GO:0010444: guard mother cell differentiation4.94E-05
18GO:0032875: regulation of DNA endoreduplication5.85E-05
19GO:0010052: guard cell differentiation6.80E-05
20GO:0006349: regulation of gene expression by genetic imprinting8.84E-05
21GO:0010216: maintenance of DNA methylation1.11E-04
22GO:0009693: ethylene biosynthetic process2.39E-04
23GO:0009294: DNA mediated transformation2.39E-04
24GO:0080022: primary root development2.82E-04
25GO:0009910: negative regulation of flower development5.70E-04
26GO:0009926: auxin polar transport7.13E-04
27GO:0016569: covalent chromatin modification1.04E-03
28GO:0009553: embryo sac development1.06E-03
29GO:0048366: leaf development2.30E-03
30GO:0006357: regulation of transcription from RNA polymerase II promoter3.74E-03
31GO:0009734: auxin-activated signaling pathway3.90E-03
32GO:0009733: response to auxin8.07E-03
33GO:0005975: carbohydrate metabolic process9.97E-03
34GO:0046686: response to cadmium ion1.01E-02
35GO:0009737: response to abscisic acid1.27E-02
36GO:0006351: transcription, DNA-templated2.50E-02
37GO:0006355: regulation of transcription, DNA-templated3.77E-02
RankGO TermAdjusted P value
1GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity0.00E+00
2GO:0019148: D-cysteine desulfhydrase activity0.00E+00
3GO:0003886: DNA (cytosine-5-)-methyltransferase activity4.09E-05
4GO:0050897: cobalt ion binding5.70E-04
5GO:0004650: polygalacturonase activity1.02E-03
6GO:0016829: lyase activity1.31E-03
7GO:0008168: methyltransferase activity2.01E-03
8GO:0003682: chromatin binding2.14E-03
9GO:0043565: sequence-specific DNA binding2.28E-03
10GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.69E-03
11GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.89E-03
12GO:0005516: calmodulin binding6.06E-03
13GO:0044212: transcription regulatory region DNA binding7.44E-03
14GO:0003824: catalytic activity7.94E-03
15GO:0016757: transferase activity, transferring glycosyl groups1.77E-02
16GO:0003700: transcription factor activity, sequence-specific DNA binding2.43E-02
17GO:0003677: DNA binding2.84E-02
18GO:0005515: protein binding4.98E-02
RankGO TermAdjusted P value
1GO:0010008: endosome membrane9.79E-04
2GO:0005874: microtubule2.32E-03
3GO:0005802: trans-Golgi network6.32E-03
4GO:0005768: endosome6.91E-03
5GO:0000139: Golgi membrane9.20E-03
6GO:0005634: nucleus1.92E-02
Gene type

Gene DE type