Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G21750

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006511: ubiquitin-dependent protein catabolic process2.46E-09
2GO:0042176: regulation of protein catabolic process3.75E-06
3GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.75E-06
4GO:0030163: protein catabolic process5.18E-06
5GO:0007292: female gamete generation3.37E-05
6GO:1900424: regulation of defense response to bacterium3.37E-05
7GO:0035266: meristem growth3.37E-05
8GO:0051788: response to misfolded protein8.48E-05
9GO:0050688: regulation of defense response to virus8.48E-05
10GO:0009156: ribonucleoside monophosphate biosynthetic process8.48E-05
11GO:0030433: ubiquitin-dependent ERAD pathway9.77E-05
12GO:0060968: regulation of gene silencing1.47E-04
13GO:0002679: respiratory burst involved in defense response2.18E-04
14GO:0048577: negative regulation of short-day photoperiodism, flowering2.18E-04
15GO:0033320: UDP-D-xylose biosynthetic process2.95E-04
16GO:0033356: UDP-L-arabinose metabolic process2.95E-04
17GO:0009165: nucleotide biosynthetic process2.95E-04
18GO:0048232: male gamete generation4.63E-04
19GO:0043248: proteasome assembly4.63E-04
20GO:0042732: D-xylose metabolic process4.63E-04
21GO:0048827: phyllome development4.63E-04
22GO:0009612: response to mechanical stimulus5.53E-04
23GO:0009651: response to salt stress7.04E-04
24GO:0010078: maintenance of root meristem identity7.44E-04
25GO:0050821: protein stabilization7.44E-04
26GO:0046686: response to cadmium ion1.04E-03
27GO:0048829: root cap development1.17E-03
28GO:0010015: root morphogenesis1.28E-03
29GO:0006913: nucleocytoplasmic transport1.28E-03
30GO:0072593: reactive oxygen species metabolic process1.28E-03
31GO:0006790: sulfur compound metabolic process1.40E-03
32GO:0009933: meristem structural organization1.65E-03
33GO:0009225: nucleotide-sugar metabolic process1.78E-03
34GO:0090351: seedling development1.78E-03
35GO:0046854: phosphatidylinositol phosphorylation1.78E-03
36GO:0009116: nucleoside metabolic process2.05E-03
37GO:0000027: ribosomal large subunit assembly2.05E-03
38GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.07E-03
39GO:0010431: seed maturation2.33E-03
40GO:0080092: regulation of pollen tube growth2.48E-03
41GO:0010154: fruit development3.25E-03
42GO:0010183: pollen tube guidance3.59E-03
43GO:0000302: response to reactive oxygen species3.76E-03
44GO:0009816: defense response to bacterium, incompatible interaction5.02E-03
45GO:0009817: defense response to fungus, incompatible interaction5.79E-03
46GO:0030244: cellulose biosynthetic process5.79E-03
47GO:0010311: lateral root formation5.99E-03
48GO:0009832: plant-type cell wall biogenesis5.99E-03
49GO:0006499: N-terminal protein myristoylation6.20E-03
50GO:0009910: negative regulation of flower development6.40E-03
51GO:0045087: innate immune response6.82E-03
52GO:0034599: cellular response to oxidative stress7.04E-03
53GO:0009926: auxin polar transport8.14E-03
54GO:0009965: leaf morphogenesis8.82E-03
55GO:0000165: MAPK cascade9.30E-03
56GO:0051603: proteolysis involved in cellular protein catabolic process1.03E-02
57GO:0048367: shoot system development1.15E-02
58GO:0009626: plant-type hypersensitive response1.18E-02
59GO:0009553: embryo sac development1.26E-02
60GO:0042744: hydrogen peroxide catabolic process1.65E-02
61GO:0006470: protein dephosphorylation2.08E-02
62GO:0009617: response to bacterium2.15E-02
63GO:0045944: positive regulation of transcription from RNA polymerase II promoter2.45E-02
64GO:0009860: pollen tube growth2.72E-02
65GO:0006952: defense response2.81E-02
66GO:0045454: cell redox homeostasis3.42E-02
67GO:0007165: signal transduction3.89E-02
68GO:0009408: response to heat3.97E-02
69GO:0048364: root development4.10E-02
70GO:0009793: embryo development ending in seed dormancy4.31E-02
71GO:0016310: phosphorylation4.57E-02
RankGO TermAdjusted P value
1GO:0036402: proteasome-activating ATPase activity3.75E-06
2GO:0030234: enzyme regulator activity2.52E-05
3GO:0017025: TBP-class protein binding5.51E-05
4GO:0051879: Hsp90 protein binding8.48E-05
5GO:0004298: threonine-type endopeptidase activity8.81E-05
6GO:0016887: ATPase activity1.36E-04
7GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.47E-04
8GO:0004749: ribose phosphate diphosphokinase activity2.18E-04
9GO:0004130: cytochrome-c peroxidase activity4.63E-04
10GO:0031593: polyubiquitin binding4.63E-04
11GO:0016688: L-ascorbate peroxidase activity4.63E-04
12GO:0048040: UDP-glucuronate decarboxylase activity4.63E-04
13GO:0070403: NAD+ binding5.53E-04
14GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.53E-04
15GO:0004190: aspartic-type endopeptidase activity1.78E-03
16GO:0004725: protein tyrosine phosphatase activity1.91E-03
17GO:0043130: ubiquitin binding2.05E-03
18GO:0047134: protein-disulfide reductase activity2.94E-03
19GO:0004791: thioredoxin-disulfide reductase activity3.42E-03
20GO:0008233: peptidase activity3.47E-03
21GO:0008237: metallopeptidase activity4.46E-03
22GO:0004722: protein serine/threonine phosphatase activity4.61E-03
23GO:0004721: phosphoprotein phosphatase activity5.40E-03
24GO:0005096: GTPase activator activity5.99E-03
25GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.65E-02
26GO:0000287: magnesium ion binding2.55E-02
27GO:0004601: peroxidase activity2.58E-02
28GO:0005524: ATP binding3.05E-02
29GO:0016301: kinase activity3.70E-02
RankGO TermAdjusted P value
1GO:0000502: proteasome complex1.38E-16
2GO:0008541: proteasome regulatory particle, lid subcomplex8.26E-10
3GO:0031597: cytosolic proteasome complex5.48E-06
4GO:0031595: nuclear proteasome complex7.64E-06
5GO:0005829: cytosol8.99E-06
6GO:0008540: proteasome regulatory particle, base subcomplex2.07E-05
7GO:0005839: proteasome core complex8.81E-05
8GO:0005838: proteasome regulatory particle1.47E-04
9GO:0000813: ESCRT I complex3.77E-04
10GO:0019773: proteasome core complex, alpha-subunit complex8.45E-04
11GO:0031307: integral component of mitochondrial outer membrane1.40E-03
12GO:0031965: nuclear membrane3.59E-03
13GO:0005819: spindle7.25E-03
14GO:0031966: mitochondrial membrane9.54E-03
15GO:0005635: nuclear envelope1.05E-02
16GO:0009543: chloroplast thylakoid lumen1.51E-02
17GO:0009524: phragmoplast1.56E-02
18GO:0005886: plasma membrane1.96E-02
19GO:0005634: nucleus2.09E-02
20GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.76E-02
21GO:0005783: endoplasmic reticulum3.74E-02
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Gene type



Gene DE type