Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G21520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0071985: multivesicular body sorting pathway0.00E+00
3GO:0010055: atrichoblast differentiation0.00E+00
4GO:1902001: fatty acid transmembrane transport0.00E+00
5GO:1902289: negative regulation of defense response to oomycetes0.00E+00
6GO:0006216: cytidine catabolic process0.00E+00
7GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
8GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
9GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
10GO:0090400: stress-induced premature senescence0.00E+00
11GO:0010793: regulation of mRNA export from nucleus0.00E+00
12GO:1902009: positive regulation of toxin transport0.00E+00
13GO:0051553: flavone biosynthetic process0.00E+00
14GO:0018063: cytochrome c-heme linkage0.00E+00
15GO:1904250: positive regulation of age-related resistance0.00E+00
16GO:0010398: xylogalacturonan metabolic process0.00E+00
17GO:0009407: toxin catabolic process9.48E-07
18GO:0009636: response to toxic substance4.56E-06
19GO:0000162: tryptophan biosynthetic process6.81E-06
20GO:1900057: positive regulation of leaf senescence9.71E-06
21GO:0009617: response to bacterium1.76E-05
22GO:0016192: vesicle-mediated transport8.20E-05
23GO:0042742: defense response to bacterium9.61E-05
24GO:0051607: defense response to virus1.01E-04
25GO:0046283: anthocyanin-containing compound metabolic process1.39E-04
26GO:0006564: L-serine biosynthetic process1.39E-04
27GO:0006012: galactose metabolic process3.10E-04
28GO:0032107: regulation of response to nutrient levels3.84E-04
29GO:0010482: regulation of epidermal cell division3.84E-04
30GO:0006680: glucosylceramide catabolic process3.84E-04
31GO:0010230: alternative respiration3.84E-04
32GO:1900384: regulation of flavonol biosynthetic process3.84E-04
33GO:0042964: thioredoxin reduction3.84E-04
34GO:0051707: response to other organism4.07E-04
35GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.35E-04
36GO:0043068: positive regulation of programmed cell death4.35E-04
37GO:0006605: protein targeting4.35E-04
38GO:0055114: oxidation-reduction process4.46E-04
39GO:0009851: auxin biosynthetic process5.67E-04
40GO:0006623: protein targeting to vacuole5.67E-04
41GO:0010112: regulation of systemic acquired resistance6.38E-04
42GO:0015031: protein transport6.96E-04
43GO:0015709: thiosulfate transport8.33E-04
44GO:0071422: succinate transmembrane transport8.33E-04
45GO:0080151: positive regulation of salicylic acid mediated signaling pathway8.33E-04
46GO:0055088: lipid homeostasis8.33E-04
47GO:0050684: regulation of mRNA processing8.33E-04
48GO:1902000: homogentisate catabolic process8.33E-04
49GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine8.33E-04
50GO:0015908: fatty acid transport8.33E-04
51GO:0051252: regulation of RNA metabolic process8.33E-04
52GO:0071668: plant-type cell wall assembly8.33E-04
53GO:0009620: response to fungus9.63E-04
54GO:0052544: defense response by callose deposition in cell wall1.01E-03
55GO:0009627: systemic acquired resistance1.13E-03
56GO:0046686: response to cadmium ion1.18E-03
57GO:0010102: lateral root morphogenesis1.31E-03
58GO:0071398: cellular response to fatty acid1.35E-03
59GO:0072661: protein targeting to plasma membrane1.35E-03
60GO:0010366: negative regulation of ethylene biosynthetic process1.35E-03
61GO:0010476: gibberellin mediated signaling pathway1.35E-03
62GO:0010325: raffinose family oligosaccharide biosynthetic process1.35E-03
63GO:0010272: response to silver ion1.35E-03
64GO:0009072: aromatic amino acid family metabolic process1.35E-03
65GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity1.35E-03
66GO:0032784: regulation of DNA-templated transcription, elongation1.35E-03
67GO:0061158: 3'-UTR-mediated mRNA destabilization1.35E-03
68GO:0006591: ornithine metabolic process1.35E-03
69GO:0002230: positive regulation of defense response to virus by host1.35E-03
70GO:0006556: S-adenosylmethionine biosynthetic process1.35E-03
71GO:0044375: regulation of peroxisome size1.35E-03
72GO:0002237: response to molecule of bacterial origin1.47E-03
73GO:0090351: seedling development1.65E-03
74GO:0070301: cellular response to hydrogen peroxide1.95E-03
75GO:0015729: oxaloacetate transport1.95E-03
76GO:0002239: response to oomycetes1.95E-03
77GO:1902290: positive regulation of defense response to oomycetes1.95E-03
78GO:0080024: indolebutyric acid metabolic process1.95E-03
79GO:0001676: long-chain fatty acid metabolic process1.95E-03
80GO:0006886: intracellular protein transport2.42E-03
81GO:0042542: response to hydrogen peroxide2.43E-03
82GO:0016998: cell wall macromolecule catabolic process2.47E-03
83GO:0010150: leaf senescence2.54E-03
84GO:0045227: capsule polysaccharide biosynthetic process2.62E-03
85GO:0009939: positive regulation of gibberellic acid mediated signaling pathway2.62E-03
86GO:0048830: adventitious root development2.62E-03
87GO:1901002: positive regulation of response to salt stress2.62E-03
88GO:0033358: UDP-L-arabinose biosynthetic process2.62E-03
89GO:0010600: regulation of auxin biosynthetic process2.62E-03
90GO:0051567: histone H3-K9 methylation2.62E-03
91GO:0010188: response to microbial phytotoxin2.62E-03
92GO:0015867: ATP transport2.62E-03
93GO:0009693: ethylene biosynthetic process2.95E-03
94GO:0009751: response to salicylic acid3.23E-03
95GO:0031365: N-terminal protein amino acid modification3.35E-03
96GO:0071423: malate transmembrane transport3.35E-03
97GO:0097428: protein maturation by iron-sulfur cluster transfer3.35E-03
98GO:0015866: ADP transport4.14E-03
99GO:0010256: endomembrane system organization4.14E-03
100GO:1900425: negative regulation of defense response to bacterium4.14E-03
101GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.14E-03
102GO:0002238: response to molecule of fungal origin4.14E-03
103GO:0009972: cytidine deamination4.14E-03
104GO:0035435: phosphate ion transmembrane transport4.14E-03
105GO:0009759: indole glucosinolate biosynthetic process4.14E-03
106GO:0048444: floral organ morphogenesis4.99E-03
107GO:0009082: branched-chain amino acid biosynthetic process4.99E-03
108GO:0009099: valine biosynthetic process4.99E-03
109GO:0010193: response to ozone5.00E-03
110GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.89E-03
111GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.89E-03
112GO:0071669: plant-type cell wall organization or biogenesis5.89E-03
113GO:0008272: sulfate transport5.89E-03
114GO:0050829: defense response to Gram-negative bacterium5.89E-03
115GO:1902074: response to salt5.89E-03
116GO:0050832: defense response to fungus6.15E-03
117GO:0006102: isocitrate metabolic process6.85E-03
118GO:0016559: peroxisome fission6.85E-03
119GO:0009819: drought recovery6.85E-03
120GO:0009615: response to virus7.24E-03
121GO:0017004: cytochrome complex assembly7.86E-03
122GO:0010208: pollen wall assembly7.86E-03
123GO:0022900: electron transport chain7.86E-03
124GO:0019430: removal of superoxide radicals7.86E-03
125GO:0009097: isoleucine biosynthetic process7.86E-03
126GO:0010497: plasmodesmata-mediated intercellular transport7.86E-03
127GO:0006997: nucleus organization7.86E-03
128GO:0010204: defense response signaling pathway, resistance gene-independent7.86E-03
129GO:0009651: response to salt stress8.35E-03
130GO:0006888: ER to Golgi vesicle-mediated transport8.53E-03
131GO:0009056: catabolic process8.92E-03
132GO:0009835: fruit ripening8.92E-03
133GO:0046685: response to arsenic-containing substance8.92E-03
134GO:0051865: protein autoubiquitination8.92E-03
135GO:0045454: cell redox homeostasis9.03E-03
136GO:0010311: lateral root formation9.95E-03
137GO:1900426: positive regulation of defense response to bacterium1.00E-02
138GO:0009098: leucine biosynthetic process1.00E-02
139GO:2000280: regulation of root development1.00E-02
140GO:0006979: response to oxidative stress1.08E-02
141GO:0010043: response to zinc ion1.10E-02
142GO:0048527: lateral root development1.10E-02
143GO:0009641: shade avoidance1.12E-02
144GO:0009870: defense response signaling pathway, resistance gene-dependent1.12E-02
145GO:0006032: chitin catabolic process1.12E-02
146GO:0009688: abscisic acid biosynthetic process1.12E-02
147GO:0048765: root hair cell differentiation1.24E-02
148GO:0009684: indoleacetic acid biosynthetic process1.24E-02
149GO:0009682: induced systemic resistance1.24E-02
150GO:0000272: polysaccharide catabolic process1.24E-02
151GO:0006099: tricarboxylic acid cycle1.26E-02
152GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.37E-02
153GO:0071365: cellular response to auxin stimulus1.37E-02
154GO:0012501: programmed cell death1.37E-02
155GO:0006839: mitochondrial transport1.37E-02
156GO:0006631: fatty acid metabolic process1.43E-02
157GO:0008152: metabolic process1.44E-02
158GO:0055046: microgametogenesis1.49E-02
159GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.49E-02
160GO:2000012: regulation of auxin polar transport1.49E-02
161GO:0000209: protein polyubiquitination1.62E-02
162GO:0007033: vacuole organization1.77E-02
163GO:0009225: nucleotide-sugar metabolic process1.77E-02
164GO:0007031: peroxisome organization1.77E-02
165GO:0007030: Golgi organization1.77E-02
166GO:0031347: regulation of defense response1.88E-02
167GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.88E-02
168GO:0034976: response to endoplasmic reticulum stress1.91E-02
169GO:0080147: root hair cell development2.05E-02
170GO:0030150: protein import into mitochondrial matrix2.05E-02
171GO:0010073: meristem maintenance2.20E-02
172GO:0051302: regulation of cell division2.20E-02
173GO:0006874: cellular calcium ion homeostasis2.20E-02
174GO:0010026: trichome differentiation2.20E-02
175GO:0043622: cortical microtubule organization2.20E-02
176GO:0006417: regulation of translation2.32E-02
177GO:0009269: response to desiccation2.36E-02
178GO:0071456: cellular response to hypoxia2.51E-02
179GO:0030433: ubiquitin-dependent ERAD pathway2.51E-02
180GO:0006730: one-carbon metabolic process2.51E-02
181GO:0031348: negative regulation of defense response2.51E-02
182GO:0009626: plant-type hypersensitive response2.65E-02
183GO:0010227: floral organ abscission2.67E-02
184GO:0006952: defense response2.84E-02
185GO:0009561: megagametogenesis2.84E-02
186GO:0009306: protein secretion2.84E-02
187GO:0009611: response to wounding3.01E-02
188GO:0042147: retrograde transport, endosome to Golgi3.01E-02
189GO:0042631: cellular response to water deprivation3.18E-02
190GO:0006520: cellular amino acid metabolic process3.35E-02
191GO:0045489: pectin biosynthetic process3.35E-02
192GO:0006662: glycerol ether metabolic process3.35E-02
193GO:0006814: sodium ion transport3.53E-02
194GO:0048544: recognition of pollen3.53E-02
195GO:0000302: response to reactive oxygen species3.89E-02
196GO:0006891: intra-Golgi vesicle-mediated transport3.89E-02
197GO:0002229: defense response to oomycetes3.89E-02
198GO:0006635: fatty acid beta-oxidation3.89E-02
199GO:0009630: gravitropism4.08E-02
200GO:1901657: glycosyl compound metabolic process4.27E-02
201GO:0071281: cellular response to iron ion4.27E-02
202GO:0006464: cellular protein modification process4.46E-02
203GO:0009409: response to cold4.95E-02
RankGO TermAdjusted P value
1GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
2GO:0016229: steroid dehydrogenase activity0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:0033759: flavone synthase activity0.00E+00
5GO:0051670: inulinase activity0.00E+00
6GO:0070401: NADP+ binding0.00E+00
7GO:0047844: deoxycytidine deaminase activity0.00E+00
8GO:0008320: protein transmembrane transporter activity1.07E-07
9GO:0004364: glutathione transferase activity2.83E-06
10GO:0102391: decanoate--CoA ligase activity2.69E-04
11GO:0004656: procollagen-proline 4-dioxygenase activity2.69E-04
12GO:0003978: UDP-glucose 4-epimerase activity2.69E-04
13GO:0043295: glutathione binding3.47E-04
14GO:0004467: long-chain fatty acid-CoA ligase activity3.47E-04
15GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity3.84E-04
16GO:0010179: IAA-Ala conjugate hydrolase activity3.84E-04
17GO:2001227: quercitrin binding3.84E-04
18GO:0004425: indole-3-glycerol-phosphate synthase activity3.84E-04
19GO:0033984: indole-3-glycerol-phosphate lyase activity3.84E-04
20GO:0032266: phosphatidylinositol-3-phosphate binding3.84E-04
21GO:0051669: fructan beta-fructosidase activity3.84E-04
22GO:0004348: glucosylceramidase activity3.84E-04
23GO:0031219: levanase activity3.84E-04
24GO:2001147: camalexin binding3.84E-04
25GO:0030942: endoplasmic reticulum signal peptide binding3.84E-04
26GO:0015245: fatty acid transporter activity3.84E-04
27GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.84E-04
28GO:0004649: poly(ADP-ribose) glycohydrolase activity3.84E-04
29GO:0004033: aldo-keto reductase (NADP) activity4.35E-04
30GO:0010331: gibberellin binding8.33E-04
31GO:0004617: phosphoglycerate dehydrogenase activity8.33E-04
32GO:0008428: ribonuclease inhibitor activity8.33E-04
33GO:1901677: phosphate transmembrane transporter activity8.33E-04
34GO:0050736: O-malonyltransferase activity8.33E-04
35GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity8.33E-04
36GO:0015117: thiosulfate transmembrane transporter activity8.33E-04
37GO:0004049: anthranilate synthase activity1.35E-03
38GO:0004478: methionine adenosyltransferase activity1.35E-03
39GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.35E-03
40GO:0043169: cation binding1.35E-03
41GO:0005310: dicarboxylic acid transmembrane transporter activity1.35E-03
42GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.35E-03
43GO:0015141: succinate transmembrane transporter activity1.35E-03
44GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.85E-03
45GO:0017077: oxidative phosphorylation uncoupler activity1.95E-03
46GO:0052655: L-valine transaminase activity1.95E-03
47GO:0015131: oxaloacetate transmembrane transporter activity1.95E-03
48GO:0035529: NADH pyrophosphatase activity1.95E-03
49GO:0010178: IAA-amino acid conjugate hydrolase activity1.95E-03
50GO:0016656: monodehydroascorbate reductase (NADH) activity1.95E-03
51GO:0052656: L-isoleucine transaminase activity1.95E-03
52GO:0004449: isocitrate dehydrogenase (NAD+) activity1.95E-03
53GO:0005432: calcium:sodium antiporter activity1.95E-03
54GO:0008106: alcohol dehydrogenase (NADP+) activity1.95E-03
55GO:0052654: L-leucine transaminase activity1.95E-03
56GO:0031418: L-ascorbic acid binding2.04E-03
57GO:0050373: UDP-arabinose 4-epimerase activity2.62E-03
58GO:0004834: tryptophan synthase activity2.62E-03
59GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.62E-03
60GO:0004031: aldehyde oxidase activity2.62E-03
61GO:0004084: branched-chain-amino-acid transaminase activity2.62E-03
62GO:0050302: indole-3-acetaldehyde oxidase activity2.62E-03
63GO:0005198: structural molecule activity2.97E-03
64GO:0004499: N,N-dimethylaniline monooxygenase activity3.20E-03
65GO:0008948: oxaloacetate decarboxylase activity3.35E-03
66GO:0047631: ADP-ribose diphosphatase activity3.35E-03
67GO:0008200: ion channel inhibitor activity4.14E-03
68GO:0000210: NAD+ diphosphatase activity4.14E-03
69GO:0035252: UDP-xylosyltransferase activity4.14E-03
70GO:0004791: thioredoxin-disulfide reductase activity4.35E-03
71GO:0004601: peroxidase activity4.95E-03
72GO:0015217: ADP transmembrane transporter activity4.99E-03
73GO:0051920: peroxiredoxin activity4.99E-03
74GO:0004126: cytidine deaminase activity4.99E-03
75GO:0004602: glutathione peroxidase activity4.99E-03
76GO:0005347: ATP transmembrane transporter activity4.99E-03
77GO:0008235: metalloexopeptidase activity5.89E-03
78GO:0008121: ubiquinol-cytochrome-c reductase activity5.89E-03
79GO:0015140: malate transmembrane transporter activity5.89E-03
80GO:0050660: flavin adenine dinucleotide binding6.18E-03
81GO:0008483: transaminase activity6.44E-03
82GO:0008237: metallopeptidase activity6.44E-03
83GO:0004714: transmembrane receptor protein tyrosine kinase activity6.85E-03
84GO:0016209: antioxidant activity6.85E-03
85GO:0008312: 7S RNA binding6.85E-03
86GO:0004034: aldose 1-epimerase activity6.85E-03
87GO:0052747: sinapyl alcohol dehydrogenase activity6.85E-03
88GO:0015491: cation:cation antiporter activity6.85E-03
89GO:0004806: triglyceride lipase activity8.53E-03
90GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity8.92E-03
91GO:0015297: antiporter activity1.11E-02
92GO:0004568: chitinase activity1.12E-02
93GO:0004177: aminopeptidase activity1.24E-02
94GO:0050661: NADP binding1.37E-02
95GO:0015116: sulfate transmembrane transporter activity1.37E-02
96GO:0045551: cinnamyl-alcohol dehydrogenase activity1.37E-02
97GO:0031072: heat shock protein binding1.49E-02
98GO:0031624: ubiquitin conjugating enzyme binding1.63E-02
99GO:0004867: serine-type endopeptidase inhibitor activity1.77E-02
100GO:0008061: chitin binding1.77E-02
101GO:0003712: transcription cofactor activity1.77E-02
102GO:0004970: ionotropic glutamate receptor activity1.77E-02
103GO:0005217: intracellular ligand-gated ion channel activity1.77E-02
104GO:0051287: NAD binding1.88E-02
105GO:0051536: iron-sulfur cluster binding2.05E-02
106GO:0043130: ubiquitin binding2.05E-02
107GO:0001046: core promoter sequence-specific DNA binding2.05E-02
108GO:0005509: calcium ion binding2.64E-02
109GO:0003756: protein disulfide isomerase activity2.84E-02
110GO:0003727: single-stranded RNA binding2.84E-02
111GO:0061630: ubiquitin protein ligase activity2.87E-02
112GO:0047134: protein-disulfide reductase activity3.01E-02
113GO:0015035: protein disulfide oxidoreductase activity3.08E-02
114GO:0016746: transferase activity, transferring acyl groups3.08E-02
115GO:0008080: N-acetyltransferase activity3.35E-02
116GO:0001085: RNA polymerase II transcription factor binding3.35E-02
117GO:0004527: exonuclease activity3.35E-02
118GO:0016853: isomerase activity3.53E-02
119GO:0010181: FMN binding3.53E-02
120GO:0042803: protein homodimerization activity3.57E-02
121GO:0016740: transferase activity3.90E-02
122GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.27E-02
123GO:0030246: carbohydrate binding4.49E-02
124GO:0016722: oxidoreductase activity, oxidizing metal ions4.66E-02
125GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.66E-02
126GO:0016597: amino acid binding4.85E-02
RankGO TermAdjusted P value
1GO:0005794: Golgi apparatus5.54E-06
2GO:0005789: endoplasmic reticulum membrane2.55E-05
3GO:0005829: cytosol1.21E-04
4GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane3.47E-04
5GO:0045252: oxoglutarate dehydrogenase complex3.84E-04
6GO:0005779: integral component of peroxisomal membrane5.32E-04
7GO:0031901: early endosome membrane6.38E-04
8GO:0032580: Golgi cisterna membrane7.90E-04
9GO:0000814: ESCRT II complex8.33E-04
10GO:0005950: anthranilate synthase complex8.33E-04
11GO:0030134: ER to Golgi transport vesicle8.33E-04
12GO:0017119: Golgi transport complex8.76E-04
13GO:0005768: endosome9.07E-04
14GO:0005788: endoplasmic reticulum lumen1.05E-03
15GO:0042406: extrinsic component of endoplasmic reticulum membrane1.35E-03
16GO:0030658: transport vesicle membrane1.95E-03
17GO:0005802: trans-Golgi network2.15E-03
18GO:0005783: endoplasmic reticulum2.21E-03
19GO:0005886: plasma membrane2.34E-03
20GO:0009504: cell plate4.67E-03
21GO:0031965: nuclear membrane4.67E-03
22GO:0030173: integral component of Golgi membrane4.99E-03
23GO:0005801: cis-Golgi network4.99E-03
24GO:0005786: signal recognition particle, endoplasmic reticulum targeting7.86E-03
25GO:0005737: cytoplasm8.39E-03
26GO:0030665: clathrin-coated vesicle membrane1.00E-02
27GO:0005743: mitochondrial inner membrane1.11E-02
28GO:0005750: mitochondrial respiratory chain complex III1.63E-02
29GO:0009505: plant-type cell wall1.64E-02
30GO:0016021: integral component of membrane1.73E-02
31GO:0005769: early endosome1.91E-02
32GO:0000139: Golgi membrane1.91E-02
33GO:0005622: intracellular2.43E-02
34GO:0005744: mitochondrial inner membrane presequence translocase complex2.84E-02
35GO:0005770: late endosome3.35E-02
36GO:0019898: extrinsic component of membrane3.71E-02
37GO:0005623: cell3.84E-02
38GO:0016592: mediator complex4.08E-02
39GO:0071944: cell periphery4.27E-02
40GO:0005778: peroxisomal membrane4.66E-02
41GO:0005774: vacuolar membrane4.81E-02
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Gene type



Gene DE type