GO Enrichment Analysis of Co-expressed Genes with
AT1G21400
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 2 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 2.89E-06 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.69E-05 |
| 4 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 2.88E-05 |
| 5 | GO:0035494: SNARE complex disassembly | 2.88E-05 |
| 6 | GO:0006144: purine nucleobase metabolic process | 2.88E-05 |
| 7 | GO:0080120: CAAX-box protein maturation | 2.88E-05 |
| 8 | GO:0071586: CAAX-box protein processing | 2.88E-05 |
| 9 | GO:0019628: urate catabolic process | 2.88E-05 |
| 10 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.80E-05 |
| 11 | GO:0090630: activation of GTPase activity | 1.27E-04 |
| 12 | GO:0010363: regulation of plant-type hypersensitive response | 2.57E-04 |
| 13 | GO:0006564: L-serine biosynthetic process | 3.30E-04 |
| 14 | GO:0006461: protein complex assembly | 3.30E-04 |
| 15 | GO:0010555: response to mannitol | 4.86E-04 |
| 16 | GO:0000338: protein deneddylation | 5.68E-04 |
| 17 | GO:0051603: proteolysis involved in cellular protein catabolic process | 6.71E-04 |
| 18 | GO:0006526: arginine biosynthetic process | 7.44E-04 |
| 19 | GO:0006972: hyperosmotic response | 7.44E-04 |
| 20 | GO:0009821: alkaloid biosynthetic process | 8.35E-04 |
| 21 | GO:0005982: starch metabolic process | 9.29E-04 |
| 22 | GO:0090332: stomatal closure | 9.29E-04 |
| 23 | GO:0006820: anion transport | 1.23E-03 |
| 24 | GO:0005986: sucrose biosynthetic process | 1.34E-03 |
| 25 | GO:0007031: peroxisome organization | 1.56E-03 |
| 26 | GO:0005985: sucrose metabolic process | 1.56E-03 |
| 27 | GO:0015992: proton transport | 2.04E-03 |
| 28 | GO:0010431: seed maturation | 2.04E-03 |
| 29 | GO:0010227: floral organ abscission | 2.30E-03 |
| 30 | GO:0010089: xylem development | 2.43E-03 |
| 31 | GO:0009561: megagametogenesis | 2.43E-03 |
| 32 | GO:0051028: mRNA transport | 2.57E-03 |
| 33 | GO:0061025: membrane fusion | 2.99E-03 |
| 34 | GO:0009646: response to absence of light | 2.99E-03 |
| 35 | GO:0016579: protein deubiquitination | 4.05E-03 |
| 36 | GO:0009751: response to salicylic acid | 4.19E-03 |
| 37 | GO:0009615: response to virus | 4.21E-03 |
| 38 | GO:0009753: response to jasmonic acid | 4.55E-03 |
| 39 | GO:0010311: lateral root formation | 5.22E-03 |
| 40 | GO:0006811: ion transport | 5.40E-03 |
| 41 | GO:0010043: response to zinc ion | 5.58E-03 |
| 42 | GO:0009640: photomorphogenesis | 7.08E-03 |
| 43 | GO:0009809: lignin biosynthetic process | 8.71E-03 |
| 44 | GO:0009585: red, far-red light phototransduction | 8.71E-03 |
| 45 | GO:0009620: response to fungus | 1.05E-02 |
| 46 | GO:0009651: response to salt stress | 1.15E-02 |
| 47 | GO:0009058: biosynthetic process | 1.36E-02 |
| 48 | GO:0042744: hydrogen peroxide catabolic process | 1.43E-02 |
| 49 | GO:0040008: regulation of growth | 1.59E-02 |
| 50 | GO:0009739: response to gibberellin | 1.78E-02 |
| 51 | GO:0009617: response to bacterium | 1.86E-02 |
| 52 | GO:0009723: response to ethylene | 2.48E-02 |
| 53 | GO:0006886: intracellular protein transport | 3.04E-02 |
| 54 | GO:0009793: embryo development ending in seed dormancy | 3.53E-02 |
| 55 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 4.21E-02 |
| 56 | GO:0006508: proteolysis | 4.67E-02 |
| 57 | GO:0009735: response to cytokinin | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 3 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 4 | GO:0036402: proteasome-activating ATPase activity | 2.89E-06 |
| 5 | GO:0017025: TBP-class protein binding | 4.35E-05 |
| 6 | GO:0004298: threonine-type endopeptidase activity | 7.03E-05 |
| 7 | GO:0004617: phosphoglycerate dehydrogenase activity | 7.28E-05 |
| 8 | GO:0052692: raffinose alpha-galactosidase activity | 1.27E-04 |
| 9 | GO:0005483: soluble NSF attachment protein activity | 1.27E-04 |
| 10 | GO:0004848: ureidoglycolate hydrolase activity | 1.27E-04 |
| 11 | GO:0004557: alpha-galactosidase activity | 1.27E-04 |
| 12 | GO:0019905: syntaxin binding | 2.57E-04 |
| 13 | GO:0016157: sucrose synthase activity | 4.86E-04 |
| 14 | GO:0015288: porin activity | 6.55E-04 |
| 15 | GO:0008308: voltage-gated anion channel activity | 7.44E-04 |
| 16 | GO:0016844: strictosidine synthase activity | 9.29E-04 |
| 17 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 1.03E-03 |
| 18 | GO:0004175: endopeptidase activity | 1.45E-03 |
| 19 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.04E-03 |
| 20 | GO:0008233: peptidase activity | 2.84E-03 |
| 21 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 3.28E-03 |
| 22 | GO:0008237: metallopeptidase activity | 3.89E-03 |
| 23 | GO:0016597: amino acid binding | 4.05E-03 |
| 24 | GO:0005096: GTPase activator activity | 5.22E-03 |
| 25 | GO:0004222: metalloendopeptidase activity | 5.40E-03 |
| 26 | GO:0016887: ATPase activity | 6.56E-03 |
| 27 | GO:0000166: nucleotide binding | 7.51E-03 |
| 28 | GO:0051287: NAD binding | 8.09E-03 |
| 29 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.71E-03 |
| 30 | GO:0046872: metal ion binding | 1.05E-02 |
| 31 | GO:0008194: UDP-glycosyltransferase activity | 1.78E-02 |
| 32 | GO:0004601: peroxidase activity | 2.24E-02 |
| 33 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 2.97E-02 |
| 34 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 3.20E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 7.03E-07 |
| 2 | GO:0031597: cytosolic proteasome complex | 4.23E-06 |
| 3 | GO:0031595: nuclear proteasome complex | 5.90E-06 |
| 4 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.62E-05 |
| 5 | GO:0005839: proteasome core complex | 7.03E-05 |
| 6 | GO:0005838: proteasome regulatory particle | 1.27E-04 |
| 7 | GO:0005773: vacuole | 2.22E-04 |
| 8 | GO:0005829: cytosol | 3.31E-04 |
| 9 | GO:0046930: pore complex | 7.44E-04 |
| 10 | GO:0008180: COP9 signalosome | 8.35E-04 |
| 11 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.23E-03 |
| 12 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.56E-03 |
| 13 | GO:0000419: DNA-directed RNA polymerase V complex | 1.67E-03 |
| 14 | GO:0005741: mitochondrial outer membrane | 2.04E-03 |
| 15 | GO:0005774: vacuolar membrane | 2.54E-03 |
| 16 | GO:0005643: nuclear pore | 5.05E-03 |
| 17 | GO:0031201: SNARE complex | 6.69E-03 |
| 18 | GO:0005635: nuclear envelope | 9.14E-03 |
| 19 | GO:0005834: heterotrimeric G-protein complex | 1.02E-02 |
| 20 | GO:0005634: nucleus | 1.28E-02 |
| 21 | GO:0048046: apoplast | 1.28E-02 |
| 22 | GO:0005618: cell wall | 1.43E-02 |
| 23 | GO:0009536: plastid | 1.87E-02 |
| 24 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.39E-02 |