GO Enrichment Analysis of Co-expressed Genes with
AT1G20470
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 5 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 6 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 7 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 8 | GO:0009773: photosynthetic electron transport in photosystem I | 4.34E-07 |
| 9 | GO:0015979: photosynthesis | 1.81E-05 |
| 10 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.46E-05 |
| 11 | GO:0006810: transport | 4.28E-05 |
| 12 | GO:0010207: photosystem II assembly | 4.63E-05 |
| 13 | GO:0042549: photosystem II stabilization | 1.04E-04 |
| 14 | GO:0009955: adaxial/abaxial pattern specification | 1.43E-04 |
| 15 | GO:0010114: response to red light | 1.52E-04 |
| 16 | GO:0043953: protein transport by the Tat complex | 2.55E-04 |
| 17 | GO:0000476: maturation of 4.5S rRNA | 2.55E-04 |
| 18 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.55E-04 |
| 19 | GO:0000967: rRNA 5'-end processing | 2.55E-04 |
| 20 | GO:0071277: cellular response to calcium ion | 2.55E-04 |
| 21 | GO:0046467: membrane lipid biosynthetic process | 2.55E-04 |
| 22 | GO:0015671: oxygen transport | 2.55E-04 |
| 23 | GO:0065002: intracellular protein transmembrane transport | 2.55E-04 |
| 24 | GO:0019252: starch biosynthetic process | 2.61E-04 |
| 25 | GO:0009657: plastid organization | 2.94E-04 |
| 26 | GO:0032544: plastid translation | 2.94E-04 |
| 27 | GO:0006098: pentose-phosphate shunt | 3.55E-04 |
| 28 | GO:0090333: regulation of stomatal closure | 3.55E-04 |
| 29 | GO:0034470: ncRNA processing | 5.64E-04 |
| 30 | GO:0080029: cellular response to boron-containing substance levels | 5.64E-04 |
| 31 | GO:0034755: iron ion transmembrane transport | 5.64E-04 |
| 32 | GO:0071457: cellular response to ozone | 5.64E-04 |
| 33 | GO:0015995: chlorophyll biosynthetic process | 5.73E-04 |
| 34 | GO:0006094: gluconeogenesis | 7.37E-04 |
| 35 | GO:0009767: photosynthetic electron transport chain | 7.37E-04 |
| 36 | GO:0006954: inflammatory response | 9.15E-04 |
| 37 | GO:0090391: granum assembly | 9.15E-04 |
| 38 | GO:0005977: glycogen metabolic process | 9.15E-04 |
| 39 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.25E-03 |
| 40 | GO:0006166: purine ribonucleoside salvage | 1.31E-03 |
| 41 | GO:0006020: inositol metabolic process | 1.31E-03 |
| 42 | GO:0071484: cellular response to light intensity | 1.31E-03 |
| 43 | GO:0009152: purine ribonucleotide biosynthetic process | 1.31E-03 |
| 44 | GO:0046653: tetrahydrofolate metabolic process | 1.31E-03 |
| 45 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.31E-03 |
| 46 | GO:0006168: adenine salvage | 1.31E-03 |
| 47 | GO:0071786: endoplasmic reticulum tubular network organization | 1.31E-03 |
| 48 | GO:0046713: borate transport | 1.31E-03 |
| 49 | GO:1902358: sulfate transmembrane transport | 1.31E-03 |
| 50 | GO:0071486: cellular response to high light intensity | 1.75E-03 |
| 51 | GO:0009765: photosynthesis, light harvesting | 1.75E-03 |
| 52 | GO:0015994: chlorophyll metabolic process | 1.75E-03 |
| 53 | GO:0010107: potassium ion import | 1.75E-03 |
| 54 | GO:0006021: inositol biosynthetic process | 1.75E-03 |
| 55 | GO:0010021: amylopectin biosynthetic process | 1.75E-03 |
| 56 | GO:0044209: AMP salvage | 2.23E-03 |
| 57 | GO:0006465: signal peptide processing | 2.23E-03 |
| 58 | GO:0071493: cellular response to UV-B | 2.23E-03 |
| 59 | GO:0098719: sodium ion import across plasma membrane | 2.23E-03 |
| 60 | GO:0006564: L-serine biosynthetic process | 2.23E-03 |
| 61 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.75E-03 |
| 62 | GO:0009228: thiamine biosynthetic process | 2.75E-03 |
| 63 | GO:0046855: inositol phosphate dephosphorylation | 2.75E-03 |
| 64 | GO:1902456: regulation of stomatal opening | 2.75E-03 |
| 65 | GO:0010190: cytochrome b6f complex assembly | 2.75E-03 |
| 66 | GO:0032502: developmental process | 2.94E-03 |
| 67 | GO:1901657: glycosyl compound metabolic process | 3.13E-03 |
| 68 | GO:1901259: chloroplast rRNA processing | 3.30E-03 |
| 69 | GO:0008272: sulfate transport | 3.89E-03 |
| 70 | GO:0009769: photosynthesis, light harvesting in photosystem II | 3.89E-03 |
| 71 | GO:0009645: response to low light intensity stimulus | 3.89E-03 |
| 72 | GO:0010027: thylakoid membrane organization | 3.97E-03 |
| 73 | GO:0055114: oxidation-reduction process | 4.27E-03 |
| 74 | GO:0052543: callose deposition in cell wall | 4.52E-03 |
| 75 | GO:0016559: peroxisome fission | 4.52E-03 |
| 76 | GO:0048564: photosystem I assembly | 4.52E-03 |
| 77 | GO:0042255: ribosome assembly | 4.52E-03 |
| 78 | GO:0006353: DNA-templated transcription, termination | 4.52E-03 |
| 79 | GO:0010078: maintenance of root meristem identity | 4.52E-03 |
| 80 | GO:0009704: de-etiolation | 4.52E-03 |
| 81 | GO:0055075: potassium ion homeostasis | 4.52E-03 |
| 82 | GO:0019430: removal of superoxide radicals | 5.18E-03 |
| 83 | GO:0018298: protein-chromophore linkage | 5.18E-03 |
| 84 | GO:0043562: cellular response to nitrogen levels | 5.18E-03 |
| 85 | GO:0017004: cytochrome complex assembly | 5.18E-03 |
| 86 | GO:0010218: response to far red light | 5.71E-03 |
| 87 | GO:0019432: triglyceride biosynthetic process | 5.86E-03 |
| 88 | GO:0009821: alkaloid biosynthetic process | 5.86E-03 |
| 89 | GO:0009637: response to blue light | 6.56E-03 |
| 90 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.58E-03 |
| 91 | GO:0051453: regulation of intracellular pH | 6.58E-03 |
| 92 | GO:0005982: starch metabolic process | 6.58E-03 |
| 93 | GO:0006949: syncytium formation | 7.33E-03 |
| 94 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.33E-03 |
| 95 | GO:0006535: cysteine biosynthetic process from serine | 7.33E-03 |
| 96 | GO:0009684: indoleacetic acid biosynthetic process | 8.11E-03 |
| 97 | GO:0006415: translational termination | 8.11E-03 |
| 98 | GO:0019684: photosynthesis, light reaction | 8.11E-03 |
| 99 | GO:0006879: cellular iron ion homeostasis | 8.11E-03 |
| 100 | GO:0006790: sulfur compound metabolic process | 8.92E-03 |
| 101 | GO:0009658: chloroplast organization | 9.58E-03 |
| 102 | GO:0010588: cotyledon vascular tissue pattern formation | 9.75E-03 |
| 103 | GO:0048467: gynoecium development | 1.06E-02 |
| 104 | GO:0010143: cutin biosynthetic process | 1.06E-02 |
| 105 | GO:0010020: chloroplast fission | 1.06E-02 |
| 106 | GO:0046854: phosphatidylinositol phosphorylation | 1.15E-02 |
| 107 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.24E-02 |
| 108 | GO:0019344: cysteine biosynthetic process | 1.34E-02 |
| 109 | GO:0006096: glycolytic process | 1.35E-02 |
| 110 | GO:0019915: lipid storage | 1.53E-02 |
| 111 | GO:0009269: response to desiccation | 1.53E-02 |
| 112 | GO:0016114: terpenoid biosynthetic process | 1.53E-02 |
| 113 | GO:0016226: iron-sulfur cluster assembly | 1.64E-02 |
| 114 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.64E-02 |
| 115 | GO:0019748: secondary metabolic process | 1.64E-02 |
| 116 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.74E-02 |
| 117 | GO:0009306: protein secretion | 1.85E-02 |
| 118 | GO:0016117: carotenoid biosynthetic process | 1.95E-02 |
| 119 | GO:0080022: primary root development | 2.07E-02 |
| 120 | GO:0000413: protein peptidyl-prolyl isomerization | 2.07E-02 |
| 121 | GO:0010087: phloem or xylem histogenesis | 2.07E-02 |
| 122 | GO:0009058: biosynthetic process | 2.16E-02 |
| 123 | GO:0071472: cellular response to salt stress | 2.18E-02 |
| 124 | GO:0009958: positive gravitropism | 2.18E-02 |
| 125 | GO:0006885: regulation of pH | 2.18E-02 |
| 126 | GO:0006520: cellular amino acid metabolic process | 2.18E-02 |
| 127 | GO:0005975: carbohydrate metabolic process | 2.20E-02 |
| 128 | GO:0006814: sodium ion transport | 2.29E-02 |
| 129 | GO:0009791: post-embryonic development | 2.41E-02 |
| 130 | GO:0048825: cotyledon development | 2.41E-02 |
| 131 | GO:0009851: auxin biosynthetic process | 2.41E-02 |
| 132 | GO:0071554: cell wall organization or biogenesis | 2.53E-02 |
| 133 | GO:0006413: translational initiation | 2.64E-02 |
| 134 | GO:0009567: double fertilization forming a zygote and endosperm | 2.90E-02 |
| 135 | GO:0009828: plant-type cell wall loosening | 2.90E-02 |
| 136 | GO:0008380: RNA splicing | 3.37E-02 |
| 137 | GO:0042128: nitrate assimilation | 3.56E-02 |
| 138 | GO:0009735: response to cytokinin | 3.77E-02 |
| 139 | GO:0016311: dephosphorylation | 3.83E-02 |
| 140 | GO:0009817: defense response to fungus, incompatible interaction | 3.97E-02 |
| 141 | GO:0048527: lateral root development | 4.41E-02 |
| 142 | GO:0009853: photorespiration | 4.70E-02 |
| 143 | GO:0034599: cellular response to oxidative stress | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 2 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 3 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 6 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 7 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 8 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.46E-05 |
| 9 | GO:0009011: starch synthase activity | 4.46E-05 |
| 10 | GO:0004332: fructose-bisphosphate aldolase activity | 1.04E-04 |
| 11 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.43E-04 |
| 12 | GO:0035671: enone reductase activity | 2.55E-04 |
| 13 | GO:0015168: glycerol transmembrane transporter activity | 2.55E-04 |
| 14 | GO:0005344: oxygen transporter activity | 2.55E-04 |
| 15 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 5.64E-04 |
| 16 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 5.64E-04 |
| 17 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.64E-04 |
| 18 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 5.64E-04 |
| 19 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.64E-04 |
| 20 | GO:0033201: alpha-1,4-glucan synthase activity | 5.64E-04 |
| 21 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 5.64E-04 |
| 22 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.64E-04 |
| 23 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.64E-04 |
| 24 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 5.64E-04 |
| 25 | GO:0019172: glyoxalase III activity | 5.64E-04 |
| 26 | GO:0019156: isoamylase activity | 5.64E-04 |
| 27 | GO:0047746: chlorophyllase activity | 5.64E-04 |
| 28 | GO:0004373: glycogen (starch) synthase activity | 9.15E-04 |
| 29 | GO:0050734: hydroxycinnamoyltransferase activity | 9.15E-04 |
| 30 | GO:0004751: ribose-5-phosphate isomerase activity | 9.15E-04 |
| 31 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 9.15E-04 |
| 32 | GO:0070402: NADPH binding | 9.15E-04 |
| 33 | GO:0008864: formyltetrahydrofolate deformylase activity | 9.15E-04 |
| 34 | GO:0031409: pigment binding | 1.03E-03 |
| 35 | GO:0001872: (1->3)-beta-D-glucan binding | 1.31E-03 |
| 36 | GO:0016851: magnesium chelatase activity | 1.31E-03 |
| 37 | GO:0003999: adenine phosphoribosyltransferase activity | 1.31E-03 |
| 38 | GO:0016149: translation release factor activity, codon specific | 1.31E-03 |
| 39 | GO:0046715: borate transmembrane transporter activity | 1.31E-03 |
| 40 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.75E-03 |
| 41 | GO:0015204: urea transmembrane transporter activity | 1.75E-03 |
| 42 | GO:0003727: single-stranded RNA binding | 1.77E-03 |
| 43 | GO:0016846: carbon-sulfur lyase activity | 2.23E-03 |
| 44 | GO:0048038: quinone binding | 2.75E-03 |
| 45 | GO:0004784: superoxide dismutase activity | 2.75E-03 |
| 46 | GO:0004556: alpha-amylase activity | 2.75E-03 |
| 47 | GO:0004462: lactoylglutathione lyase activity | 2.75E-03 |
| 48 | GO:0015081: sodium ion transmembrane transporter activity | 2.75E-03 |
| 49 | GO:0004124: cysteine synthase activity | 3.30E-03 |
| 50 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.30E-03 |
| 51 | GO:0016168: chlorophyll binding | 4.20E-03 |
| 52 | GO:0004033: aldo-keto reductase (NADP) activity | 4.52E-03 |
| 53 | GO:0102483: scopolin beta-glucosidase activity | 4.68E-03 |
| 54 | GO:0008135: translation factor activity, RNA binding | 5.18E-03 |
| 55 | GO:0008271: secondary active sulfate transmembrane transporter activity | 5.18E-03 |
| 56 | GO:0016491: oxidoreductase activity | 5.59E-03 |
| 57 | GO:0003747: translation release factor activity | 5.86E-03 |
| 58 | GO:0005381: iron ion transmembrane transporter activity | 6.58E-03 |
| 59 | GO:0016844: strictosidine synthase activity | 6.58E-03 |
| 60 | GO:0008422: beta-glucosidase activity | 7.17E-03 |
| 61 | GO:0047372: acylglycerol lipase activity | 8.11E-03 |
| 62 | GO:0015386: potassium:proton antiporter activity | 8.11E-03 |
| 63 | GO:0008559: xenobiotic-transporting ATPase activity | 8.11E-03 |
| 64 | GO:0015116: sulfate transmembrane transporter activity | 8.92E-03 |
| 65 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.16E-03 |
| 66 | GO:0005509: calcium ion binding | 9.36E-03 |
| 67 | GO:0003725: double-stranded RNA binding | 9.75E-03 |
| 68 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.75E-03 |
| 69 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.06E-02 |
| 70 | GO:0051536: iron-sulfur cluster binding | 1.34E-02 |
| 71 | GO:0030570: pectate lyase activity | 1.74E-02 |
| 72 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.80E-02 |
| 73 | GO:0019843: rRNA binding | 2.05E-02 |
| 74 | GO:0003713: transcription coactivator activity | 2.18E-02 |
| 75 | GO:0009055: electron carrier activity | 2.25E-02 |
| 76 | GO:0015385: sodium:proton antiporter activity | 2.78E-02 |
| 77 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.03E-02 |
| 78 | GO:0016413: O-acetyltransferase activity | 3.16E-02 |
| 79 | GO:0016597: amino acid binding | 3.16E-02 |
| 80 | GO:0015250: water channel activity | 3.29E-02 |
| 81 | GO:0003743: translation initiation factor activity | 3.30E-02 |
| 82 | GO:0030247: polysaccharide binding | 3.70E-02 |
| 83 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 3.83E-02 |
| 84 | GO:0003824: catalytic activity | 3.87E-02 |
| 85 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.41E-02 |
| 86 | GO:0016788: hydrolase activity, acting on ester bonds | 4.44E-02 |
| 87 | GO:0003746: translation elongation factor activity | 4.70E-02 |
| 88 | GO:0003993: acid phosphatase activity | 4.85E-02 |
| 89 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.08E-33 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 3.26E-22 |
| 5 | GO:0009579: thylakoid | 1.18E-14 |
| 6 | GO:0009570: chloroplast stroma | 1.42E-12 |
| 7 | GO:0009534: chloroplast thylakoid | 3.48E-12 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 3.26E-11 |
| 9 | GO:0009941: chloroplast envelope | 2.44E-10 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 8.13E-10 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.07E-09 |
| 12 | GO:0031977: thylakoid lumen | 1.37E-08 |
| 13 | GO:0019898: extrinsic component of membrane | 4.67E-07 |
| 14 | GO:0010287: plastoglobule | 6.40E-06 |
| 15 | GO:0033281: TAT protein transport complex | 1.09E-05 |
| 16 | GO:0030095: chloroplast photosystem II | 4.63E-05 |
| 17 | GO:0009522: photosystem I | 2.37E-04 |
| 18 | GO:0031361: integral component of thylakoid membrane | 2.55E-04 |
| 19 | GO:0005787: signal peptidase complex | 2.55E-04 |
| 20 | GO:0010007: magnesium chelatase complex | 9.15E-04 |
| 21 | GO:0030076: light-harvesting complex | 9.26E-04 |
| 22 | GO:0071782: endoplasmic reticulum tubular network | 1.31E-03 |
| 23 | GO:0009517: PSII associated light-harvesting complex II | 1.75E-03 |
| 24 | GO:0009523: photosystem II | 2.57E-03 |
| 25 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 4.52E-03 |
| 26 | GO:0009501: amyloplast | 4.52E-03 |
| 27 | GO:0009539: photosystem II reaction center | 5.18E-03 |
| 28 | GO:0005763: mitochondrial small ribosomal subunit | 5.86E-03 |
| 29 | GO:0009508: plastid chromosome | 9.75E-03 |
| 30 | GO:0031969: chloroplast membrane | 1.26E-02 |
| 31 | GO:0042651: thylakoid membrane | 1.43E-02 |
| 32 | GO:0048046: apoplast | 1.55E-02 |
| 33 | GO:0010319: stromule | 3.03E-02 |
| 34 | GO:0009295: nucleoid | 3.03E-02 |
| 35 | GO:0030529: intracellular ribonucleoprotein complex | 3.29E-02 |
| 36 | GO:0005840: ribosome | 3.62E-02 |
| 37 | GO:0009707: chloroplast outer membrane | 3.97E-02 |
| 38 | GO:0000325: plant-type vacuole | 4.41E-02 |