co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G20110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process	0.00E+00
2	GO:0006511: ubiquitin-dependent protein catabolic process	1.39E-06
3	GO:0006461: protein complex assembly	2.26E-06
4	GO:1901430: positive regulation of syringal lignin biosynthetic process	3.25E-05
5	GO:0006996: organelle organization	8.18E-05
6	GO:2000072: regulation of defense response to fungus, incompatible interaction	8.18E-05
7	GO:0042147: retrograde transport, endosome to Golgi	1.23E-04
8	GO:0045039: protein import into mitochondrial inner membrane	1.42E-04
9	GO:0010498: proteasomal protein catabolic process	1.42E-04
10	GO:0030163: protein catabolic process	2.09E-04
11	GO:0010255: glucose mediated signaling pathway	2.11E-04
12	GO:0010363: regulation of plant-type hypersensitive response	2.85E-04
13	GO:0006221: pyrimidine nucleotide biosynthetic process	2.85E-04
14	GO:0051205: protein insertion into membrane	2.85E-04
15	GO:0006888: ER to Golgi vesicle-mediated transport	3.15E-04
16	GO:0098719: sodium ion import across plasma membrane	3.65E-04
17	GO:0018279: protein N-linked glycosylation via asparagine	3.65E-04
18	GO:0006564: L-serine biosynthetic process	3.65E-04
19	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.48E-04
20	GO:0042176: regulation of protein catabolic process	4.48E-04
21	GO:0048280: vesicle fusion with Golgi apparatus	5.36E-04
22	GO:0000338: protein deneddylation	6.27E-04
23	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	6.27E-04
24	GO:0051603: proteolysis involved in cellular protein catabolic process	7.76E-04
25	GO:0006972: hyperosmotic response	8.20E-04
26	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	8.20E-04
27	GO:0051453: regulation of intracellular pH	1.02E-03
28	GO:0006896: Golgi to vacuole transport	1.13E-03
29	GO:0006790: sulfur compound metabolic process	1.36E-03
30	GO:0046854: phosphatidylinositol phosphorylation	1.72E-03
31	GO:0009793: embryo development ending in seed dormancy	1.74E-03
32	GO:0010187: negative regulation of seed germination	1.99E-03
33	GO:0030433: ubiquitin-dependent ERAD pathway	2.40E-03
34	GO:0080092: regulation of pollen tube growth	2.40E-03
35	GO:0010089: xylem development	2.69E-03
36	GO:0009561: megagametogenesis	2.69E-03
37	GO:0009651: response to salt stress	3.06E-03
38	GO:0008360: regulation of cell shape	3.15E-03
39	GO:0006814: sodium ion transport	3.31E-03
40	GO:0009646: response to absence of light	3.31E-03
41	GO:0006623: protein targeting to vacuole	3.47E-03
42	GO:0010183: pollen tube guidance	3.47E-03
43	GO:0006891: intra-Golgi vesicle-mediated transport	3.63E-03
44	GO:0009630: gravitropism	3.80E-03
45	GO:0006914: autophagy	4.14E-03
46	GO:0071805: potassium ion transmembrane transport	4.32E-03
47	GO:0006950: response to stress	5.22E-03
48	GO:0010311: lateral root formation	5.80E-03
49	GO:0010043: response to zinc ion	6.19E-03
50	GO:0009867: jasmonic acid mediated signaling pathway	6.60E-03
51	GO:0045087: innate immune response	6.60E-03
52	GO:0009640: photomorphogenesis	7.87E-03
53	GO:0009555: pollen development	8.75E-03
54	GO:0009664: plant-type cell wall organization	9.22E-03
55	GO:0009809: lignin biosynthetic process	9.69E-03
56	GO:0009585: red, far-red light phototransduction	9.69E-03
57	GO:0006096: glycolytic process	1.09E-02
58	GO:0009553: embryo sac development	1.22E-02
59	GO:0042744: hydrogen peroxide catabolic process	1.60E-02
60	GO:0015031: protein transport	2.26E-02
61	GO:0009826: unidimensional cell growth	2.43E-02
62	GO:0009860: pollen tube growth	2.63E-02
63	GO:0046686: response to cadmium ion	2.77E-02
64	GO:0045454: cell redox homeostasis	3.31E-02
65	GO:0006886: intracellular protein transport	3.38E-02
66	GO:0009408: response to heat	3.84E-02
67	GO:0009734: auxin-activated signaling pathway	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	0.00E+00
2	GO:0004298: threonine-type endopeptidase activity	1.06E-06
3	GO:0019786: Atg8-specific protease activity	3.25E-05
4	GO:0004617: phosphoglycerate dehydrogenase activity	8.18E-05
5	GO:0004127: cytidylate kinase activity	8.18E-05
6	GO:0019779: Atg8 activating enzyme activity	8.18E-05
7	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.42E-04
8	GO:0009041: uridylate kinase activity	2.11E-04
9	GO:0019776: Atg8 ligase activity	2.85E-04
10	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.65E-04
11	GO:0008233: peptidase activity	3.67E-04
12	GO:0036402: proteasome-activating ATPase activity	4.48E-04
13	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.36E-04
14	GO:0003843: 1,3-beta-D-glucan synthase activity	8.20E-04
15	GO:0030955: potassium ion binding	1.02E-03
16	GO:0004743: pyruvate kinase activity	1.02E-03
17	GO:0030234: enzyme regulator activity	1.13E-03
18	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.13E-03
19	GO:0015386: potassium:proton antiporter activity	1.24E-03
20	GO:0017025: TBP-class protein binding	1.72E-03
21	GO:0047134: protein-disulfide reductase activity	2.84E-03
22	GO:0004791: thioredoxin-disulfide reductase activity	3.31E-03
23	GO:0004872: receptor activity	3.47E-03
24	GO:0015385: sodium:proton antiporter activity	3.97E-03
25	GO:0008237: metallopeptidase activity	4.32E-03
26	GO:0016597: amino acid binding	4.49E-03
27	GO:0016798: hydrolase activity, acting on glycosyl bonds	5.22E-03
28	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.60E-03
29	GO:0000149: SNARE binding	7.01E-03
30	GO:0005484: SNAP receptor activity	7.87E-03
31	GO:0016787: hydrolase activity	7.93E-03
32	GO:0000166: nucleotide binding	8.75E-03
33	GO:0051287: NAD binding	8.99E-03
34	GO:0008565: protein transporter activity	1.65E-02
35	GO:0000287: magnesium ion binding	2.46E-02
36	GO:0004601: peroxidase activity	2.50E-02
37	GO:0005524: ATP binding	2.75E-02
38	GO:0004722: protein serine/threonine phosphatase activity	3.53E-02
39	GO:0008289: lipid binding	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	1.83E-10
2	GO:0005839: proteasome core complex	1.06E-06
3	GO:0008541: proteasome regulatory particle, lid subcomplex	2.85E-05
4	GO:0005829: cytosol	3.67E-05
5	GO:0005775: vacuolar lumen	2.11E-04
6	GO:0005776: autophagosome	2.85E-04
7	GO:0008250: oligosaccharyltransferase complex	3.65E-04
8	GO:0030904: retromer complex	4.48E-04
9	GO:0030140: trans-Golgi network transport vesicle	4.48E-04
10	GO:0031902: late endosome membrane	5.22E-04
11	GO:0031597: cytosolic proteasome complex	5.36E-04
12	GO:0031595: nuclear proteasome complex	6.27E-04
13	GO:0012507: ER to Golgi transport vesicle membrane	7.22E-04
14	GO:0000421: autophagosome membrane	7.22E-04
15	GO:0019773: proteasome core complex, alpha-subunit complex	8.20E-04
16	GO:0000148: 1,3-beta-D-glucan synthase complex	8.20E-04
17	GO:0008180: COP9 signalosome	9.20E-04
18	GO:0008540: proteasome regulatory particle, base subcomplex	1.02E-03
19	GO:0031410: cytoplasmic vesicle	2.40E-03
20	GO:0005770: late endosome	3.15E-03
21	GO:0009504: cell plate	3.47E-03
22	GO:0032580: Golgi cisterna membrane	4.14E-03
23	GO:0019005: SCF ubiquitin ligase complex	5.60E-03
24	GO:0009707: chloroplast outer membrane	5.60E-03
25	GO:0000325: plant-type vacuole	6.19E-03
26	GO:0031201: SNARE complex	7.43E-03
27	GO:0022626: cytosolic ribosome	8.37E-03
28	GO:0010008: endosome membrane	1.11E-02
29	GO:0005802: trans-Golgi network	1.41E-02
30	GO:0005774: vacuolar membrane	1.46E-02
31	GO:0005623: cell	1.48E-02
32	GO:0005768: endosome	1.60E-02
33	GO:0005886: plasma membrane	1.69E-02
34	GO:0005773: vacuole	2.50E-02
35	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.67E-02
36	GO:0005789: endoplasmic reticulum membrane	2.72E-02
37	GO:0005874: microtubule	2.84E-02
38	GO:0005737: cytoplasm	3.41E-02
39	GO:0005743: mitochondrial inner membrane	3.65E-02
40	GO:0005794: Golgi apparatus	3.78E-02