co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G19720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process	0.00E+00
2	GO:0015843: methylammonium transport	0.00E+00
3	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
4	GO:0009657: plastid organization	4.70E-05
5	GO:0000476: maturation of 4.5S rRNA	7.58E-05
6	GO:0000967: rRNA 5'-end processing	7.58E-05
7	GO:0046467: membrane lipid biosynthetic process	7.58E-05
8	GO:0030048: actin filament-based movement	1.36E-04
9	GO:0071457: cellular response to ozone	1.81E-04
10	GO:0010541: acropetal auxin transport	1.81E-04
11	GO:0060151: peroxisome localization	1.81E-04
12	GO:0000256: allantoin catabolic process	1.81E-04
13	GO:0034470: ncRNA processing	1.81E-04
14	GO:0051645: Golgi localization	1.81E-04
15	GO:0005975: carbohydrate metabolic process	2.43E-04
16	GO:0009405: pathogenesis	3.05E-04
17	GO:0051646: mitochondrion localization	3.05E-04
18	GO:0010160: formation of animal organ boundary	3.05E-04
19	GO:0010136: ureide catabolic process	3.05E-04
20	GO:0090436: leaf pavement cell development	3.05E-04
21	GO:0005977: glycogen metabolic process	3.05E-04
22	GO:0015696: ammonium transport	4.41E-04
23	GO:0071484: cellular response to light intensity	4.41E-04
24	GO:0009152: purine ribonucleotide biosynthetic process	4.41E-04
25	GO:0046653: tetrahydrofolate metabolic process	4.41E-04
26	GO:0043481: anthocyanin accumulation in tissues in response to UV light	4.41E-04
27	GO:0006145: purine nucleobase catabolic process	4.41E-04
28	GO:2000122: negative regulation of stomatal complex development	5.87E-04
29	GO:0006021: inositol biosynthetic process	5.87E-04
30	GO:0010021: amylopectin biosynthetic process	5.87E-04
31	GO:0010037: response to carbon dioxide	5.87E-04
32	GO:0015976: carbon utilization	5.87E-04
33	GO:0071486: cellular response to high light intensity	5.87E-04
34	GO:0072488: ammonium transmembrane transport	5.87E-04
35	GO:0006564: L-serine biosynthetic process	7.44E-04
36	GO:0071493: cellular response to UV-B	7.44E-04
37	GO:0009228: thiamine biosynthetic process	9.07E-04
38	GO:0046855: inositol phosphate dephosphorylation	9.07E-04
39	GO:0006655: phosphatidylglycerol biosynthetic process	9.07E-04
40	GO:0060918: auxin transport	9.07E-04
41	GO:0050665: hydrogen peroxide biosynthetic process	9.07E-04
42	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.07E-04
43	GO:0009854: oxidative photosynthetic carbon pathway	1.08E-03
44	GO:0071333: cellular response to glucose stimulus	1.08E-03
45	GO:0016559: peroxisome fission	1.46E-03
46	GO:0019430: removal of superoxide radicals	1.66E-03
47	GO:0010204: defense response signaling pathway, resistance gene-independent	1.66E-03
48	GO:0071577: zinc II ion transmembrane transport	2.09E-03
49	GO:0005982: starch metabolic process	2.09E-03
50	GO:0009773: photosynthetic electron transport in photosystem I	2.56E-03
51	GO:0016024: CDP-diacylglycerol biosynthetic process	2.80E-03
52	GO:0008361: regulation of cell size	2.80E-03
53	GO:0006790: sulfur compound metabolic process	2.80E-03
54	GO:0009767: photosynthetic electron transport chain	3.06E-03
55	GO:0010020: chloroplast fission	3.32E-03
56	GO:0010540: basipetal auxin transport	3.32E-03
57	GO:0048467: gynoecium development	3.32E-03
58	GO:0019853: L-ascorbic acid biosynthetic process	3.59E-03
59	GO:0046854: phosphatidylinositol phosphorylation	3.59E-03
60	GO:0006810: transport	4.73E-03
61	GO:0016114: terpenoid biosynthetic process	4.73E-03
62	GO:0019748: secondary metabolic process	5.03E-03
63	GO:0009686: gibberellin biosynthetic process	5.34E-03
64	GO:0071215: cellular response to abscisic acid stimulus	5.34E-03
65	GO:0009306: protein secretion	5.66E-03
66	GO:0048443: stamen development	5.66E-03
67	GO:0071472: cellular response to salt stress	6.64E-03
68	GO:0010154: fruit development	6.64E-03
69	GO:0009958: positive gravitropism	6.64E-03
70	GO:0006520: cellular amino acid metabolic process	6.64E-03
71	GO:0010268: brassinosteroid homeostasis	6.64E-03
72	GO:0007059: chromosome segregation	6.99E-03
73	GO:0019252: starch biosynthetic process	7.34E-03
74	GO:0009791: post-embryonic development	7.34E-03
75	GO:0016132: brassinosteroid biosynthetic process	7.69E-03
76	GO:0007264: small GTPase mediated signal transduction	8.05E-03
77	GO:0010090: trichome morphogenesis	8.42E-03
78	GO:1901657: glycosyl compound metabolic process	8.42E-03
79	GO:0009639: response to red or far red light	8.79E-03
80	GO:0009567: double fertilization forming a zygote and endosperm	8.79E-03
81	GO:0016125: sterol metabolic process	8.79E-03
82	GO:0010027: thylakoid membrane organization	9.95E-03
83	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.03E-02
84	GO:0015995: chlorophyll biosynthetic process	1.12E-02
85	GO:0016049: cell growth	1.16E-02
86	GO:0016311: dephosphorylation	1.16E-02
87	GO:0010218: response to far red light	1.28E-02
88	GO:0048527: lateral root development	1.33E-02
89	GO:0010119: regulation of stomatal movement	1.33E-02
90	GO:0009637: response to blue light	1.42E-02
91	GO:0009853: photorespiration	1.42E-02
92	GO:0034599: cellular response to oxidative stress	1.46E-02
93	GO:0009640: photomorphogenesis	1.70E-02
94	GO:0010114: response to red light	1.70E-02
95	GO:0009926: auxin polar transport	1.70E-02
96	GO:0006812: cation transport	1.99E-02
97	GO:0006417: regulation of translation	2.25E-02
98	GO:0048367: shoot system development	2.42E-02
99	GO:0009624: response to nematode	2.69E-02
100	GO:0006396: RNA processing	2.75E-02
101	GO:0051301: cell division	2.87E-02
102	GO:0009058: biosynthetic process	3.28E-02
103	GO:0055114: oxidation-reduction process	3.61E-02
104	GO:0016310: phosphorylation	3.78E-02
105	GO:0006413: translational initiation	3.78E-02
106	GO:0007623: circadian rhythm	3.98E-02

Rank	GO Term	Adjusted P value
1	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
2	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
3	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
4	GO:0051777: ent-kaurenoate oxidase activity	7.58E-05
5	GO:0010347: L-galactose-1-phosphate phosphatase activity	7.58E-05
6	GO:0003774: motor activity	1.55E-04
7	GO:0019156: isoamylase activity	1.81E-04
8	GO:0004617: phosphoglycerate dehydrogenase activity	1.81E-04
9	GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity	1.81E-04
10	GO:0052832: inositol monophosphate 3-phosphatase activity	1.81E-04
11	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.81E-04
12	GO:0008934: inositol monophosphate 1-phosphatase activity	1.81E-04
13	GO:0052833: inositol monophosphate 4-phosphatase activity	1.81E-04
14	GO:0004848: ureidoglycolate hydrolase activity	3.05E-04
15	GO:0090729: toxin activity	3.05E-04
16	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	3.05E-04
17	GO:0008864: formyltetrahydrofolate deformylase activity	3.05E-04
18	GO:0003883: CTP synthase activity	4.41E-04
19	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	4.41E-04
20	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	4.41E-04
21	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	4.41E-04
22	GO:0008891: glycolate oxidase activity	5.87E-04
23	GO:0042802: identical protein binding	8.92E-04
24	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	9.07E-04
25	GO:0004784: superoxide dismutase activity	9.07E-04
26	GO:0042578: phosphoric ester hydrolase activity	9.07E-04
27	GO:0004556: alpha-amylase activity	9.07E-04
28	GO:0008519: ammonium transmembrane transporter activity	9.07E-04
29	GO:2001070: starch binding	9.07E-04
30	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.08E-03
31	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.08E-03
32	GO:0047372: acylglycerol lipase activity	2.56E-03
33	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.61E-03
34	GO:0010329: auxin efflux transmembrane transporter activity	3.06E-03
35	GO:0004089: carbonate dehydratase activity	3.06E-03
36	GO:0004565: beta-galactosidase activity	3.06E-03
37	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.32E-03
38	GO:0005385: zinc ion transmembrane transporter activity	4.15E-03
39	GO:0008324: cation transmembrane transporter activity	4.43E-03
40	GO:0003727: single-stranded RNA binding	5.66E-03
41	GO:0010181: FMN binding	6.99E-03
42	GO:0008237: metallopeptidase activity	9.17E-03
43	GO:0005525: GTP binding	9.41E-03
44	GO:0016597: amino acid binding	9.56E-03
45	GO:0102483: scopolin beta-glucosidase activity	1.12E-02
46	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.20E-02
47	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.33E-02
48	GO:0003993: acid phosphatase activity	1.46E-02
49	GO:0008422: beta-glucosidase activity	1.51E-02
50	GO:0004185: serine-type carboxypeptidase activity	1.70E-02
51	GO:0016491: oxidoreductase activity	1.74E-02
52	GO:0043621: protein self-association	1.79E-02
53	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.89E-02
54	GO:0051287: NAD binding	1.94E-02
55	GO:0022857: transmembrane transporter activity	2.58E-02
56	GO:0003779: actin binding	2.64E-02
57	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.47E-02
58	GO:0030246: carbohydrate binding	3.54E-02
59	GO:0019825: oxygen binding	3.74E-02
60	GO:0005516: calmodulin binding	3.95E-02
61	GO:0008017: microtubule binding	4.11E-02
62	GO:0003743: translation initiation factor activity	4.44E-02
63	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.62E-05
2	GO:0009344: nitrite reductase complex [NAD(P)H]	7.58E-05
3	GO:0016459: myosin complex	8.54E-05
4	GO:0009570: chloroplast stroma	9.27E-05
5	GO:0043036: starch grain	1.81E-04
6	GO:0030658: transport vesicle membrane	4.41E-04
7	GO:0009543: chloroplast thylakoid lumen	4.42E-04
8	GO:0005773: vacuole	8.60E-04
9	GO:0009534: chloroplast thylakoid	1.21E-03
10	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.87E-03
11	GO:0005765: lysosomal membrane	2.56E-03
12	GO:0030095: chloroplast photosystem II	3.32E-03
13	GO:0009654: photosystem II oxygen evolving complex	4.43E-03
14	GO:0005777: peroxisome	5.96E-03
15	GO:0019898: extrinsic component of membrane	7.34E-03
16	GO:0009535: chloroplast thylakoid membrane	8.97E-03
17	GO:0005886: plasma membrane	1.01E-02
18	GO:0009707: chloroplast outer membrane	1.20E-02
19	GO:0005819: spindle	1.51E-02
20	GO:0031902: late endosome membrane	1.60E-02
21	GO:0009941: chloroplast envelope	2.72E-02
22	GO:0005623: cell	3.22E-02