GO Enrichment Analysis of Co-expressed Genes with
AT1G19150
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
2 | GO:0033494: ferulate metabolic process | 0.00E+00 |
3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
5 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
6 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
7 | GO:0035674: tricarboxylic acid transmembrane transport | 0.00E+00 |
8 | GO:0009661: chromoplast organization | 0.00E+00 |
9 | GO:0009773: photosynthetic electron transport in photosystem I | 5.43E-11 |
10 | GO:0015979: photosynthesis | 7.91E-10 |
11 | GO:0010207: photosystem II assembly | 2.05E-08 |
12 | GO:0090391: granum assembly | 2.33E-08 |
13 | GO:0032544: plastid translation | 8.96E-06 |
14 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.76E-05 |
15 | GO:0071484: cellular response to light intensity | 2.76E-05 |
16 | GO:0010143: cutin biosynthetic process | 5.34E-05 |
17 | GO:0015995: chlorophyll biosynthetic process | 6.04E-05 |
18 | GO:0006810: transport | 6.06E-05 |
19 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.59E-05 |
20 | GO:0010190: cytochrome b6f complex assembly | 1.15E-04 |
21 | GO:0042549: photosystem II stabilization | 1.15E-04 |
22 | GO:1901259: chloroplast rRNA processing | 1.58E-04 |
23 | GO:0010189: vitamin E biosynthetic process | 1.58E-04 |
24 | GO:0010196: nonphotochemical quenching | 2.07E-04 |
25 | GO:0009772: photosynthetic electron transport in photosystem II | 2.07E-04 |
26 | GO:0005980: glycogen catabolic process | 2.72E-04 |
27 | GO:0071277: cellular response to calcium ion | 2.72E-04 |
28 | GO:0046467: membrane lipid biosynthetic process | 2.72E-04 |
29 | GO:0015671: oxygen transport | 2.72E-04 |
30 | GO:0080093: regulation of photorespiration | 2.72E-04 |
31 | GO:0031998: regulation of fatty acid beta-oxidation | 2.72E-04 |
32 | GO:0034337: RNA folding | 2.72E-04 |
33 | GO:0006835: dicarboxylic acid transport | 2.72E-04 |
34 | GO:0006098: pentose-phosphate shunt | 3.90E-04 |
35 | GO:0010206: photosystem II repair | 3.90E-04 |
36 | GO:0010027: thylakoid membrane organization | 5.23E-04 |
37 | GO:0080029: cellular response to boron-containing substance levels | 5.99E-04 |
38 | GO:0071457: cellular response to ozone | 5.99E-04 |
39 | GO:1904143: positive regulation of carotenoid biosynthetic process | 5.99E-04 |
40 | GO:0006729: tetrahydrobiopterin biosynthetic process | 5.99E-04 |
41 | GO:0006094: gluconeogenesis | 8.06E-04 |
42 | GO:0006518: peptide metabolic process | 9.72E-04 |
43 | GO:0006633: fatty acid biosynthetic process | 1.02E-03 |
44 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.37E-03 |
45 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.39E-03 |
46 | GO:0046713: borate transport | 1.39E-03 |
47 | GO:1902358: sulfate transmembrane transport | 1.39E-03 |
48 | GO:0006020: inositol metabolic process | 1.39E-03 |
49 | GO:0055114: oxidation-reduction process | 1.47E-03 |
50 | GO:0009765: photosynthesis, light harvesting | 1.86E-03 |
51 | GO:0045727: positive regulation of translation | 1.86E-03 |
52 | GO:0015994: chlorophyll metabolic process | 1.86E-03 |
53 | GO:0006546: glycine catabolic process | 1.86E-03 |
54 | GO:0006021: inositol biosynthetic process | 1.86E-03 |
55 | GO:0071486: cellular response to high light intensity | 1.86E-03 |
56 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.86E-03 |
57 | GO:0006364: rRNA processing | 1.97E-03 |
58 | GO:0009658: chloroplast organization | 2.28E-03 |
59 | GO:0006465: signal peptide processing | 2.37E-03 |
60 | GO:0071493: cellular response to UV-B | 2.37E-03 |
61 | GO:0016120: carotene biosynthetic process | 2.37E-03 |
62 | GO:0006564: L-serine biosynthetic process | 2.37E-03 |
63 | GO:0010236: plastoquinone biosynthetic process | 2.37E-03 |
64 | GO:0006097: glyoxylate cycle | 2.37E-03 |
65 | GO:0006096: glycolytic process | 2.44E-03 |
66 | GO:1902456: regulation of stomatal opening | 2.93E-03 |
67 | GO:0046855: inositol phosphate dephosphorylation | 2.93E-03 |
68 | GO:0006751: glutathione catabolic process | 2.93E-03 |
69 | GO:0080167: response to karrikin | 3.16E-03 |
70 | GO:0009735: response to cytokinin | 3.17E-03 |
71 | GO:0009854: oxidative photosynthetic carbon pathway | 3.52E-03 |
72 | GO:0009955: adaxial/abaxial pattern specification | 3.52E-03 |
73 | GO:0009416: response to light stimulus | 3.71E-03 |
74 | GO:0008272: sulfate transport | 4.15E-03 |
75 | GO:0009769: photosynthesis, light harvesting in photosystem II | 4.15E-03 |
76 | GO:0009645: response to low light intensity stimulus | 4.15E-03 |
77 | GO:0009642: response to light intensity | 4.82E-03 |
78 | GO:0009704: de-etiolation | 4.82E-03 |
79 | GO:0050821: protein stabilization | 4.82E-03 |
80 | GO:0032259: methylation | 5.36E-03 |
81 | GO:0009657: plastid organization | 5.52E-03 |
82 | GO:0019430: removal of superoxide radicals | 5.52E-03 |
83 | GO:0019432: triglyceride biosynthetic process | 6.25E-03 |
84 | GO:0090333: regulation of stomatal closure | 6.25E-03 |
85 | GO:0006783: heme biosynthetic process | 6.25E-03 |
86 | GO:0006754: ATP biosynthetic process | 6.25E-03 |
87 | GO:0006412: translation | 6.91E-03 |
88 | GO:0006779: porphyrin-containing compound biosynthetic process | 7.03E-03 |
89 | GO:0005982: starch metabolic process | 7.03E-03 |
90 | GO:0010205: photoinhibition | 7.03E-03 |
91 | GO:0009409: response to cold | 7.09E-03 |
92 | GO:0034599: cellular response to oxidative stress | 7.53E-03 |
93 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.82E-03 |
94 | GO:0009641: shade avoidance | 7.82E-03 |
95 | GO:0006631: fatty acid metabolic process | 8.57E-03 |
96 | GO:0006415: translational termination | 8.66E-03 |
97 | GO:0043085: positive regulation of catalytic activity | 8.66E-03 |
98 | GO:0000272: polysaccharide catabolic process | 8.66E-03 |
99 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.66E-03 |
100 | GO:0010114: response to red light | 9.30E-03 |
101 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.52E-03 |
102 | GO:0006790: sulfur compound metabolic process | 9.52E-03 |
103 | GO:0006108: malate metabolic process | 1.04E-02 |
104 | GO:0006006: glucose metabolic process | 1.04E-02 |
105 | GO:0009725: response to hormone | 1.04E-02 |
106 | GO:0009767: photosynthetic electron transport chain | 1.04E-02 |
107 | GO:0042254: ribosome biogenesis | 1.10E-02 |
108 | GO:0019253: reductive pentose-phosphate cycle | 1.13E-02 |
109 | GO:0010223: secondary shoot formation | 1.13E-02 |
110 | GO:0009266: response to temperature stimulus | 1.13E-02 |
111 | GO:0046854: phosphatidylinositol phosphorylation | 1.23E-02 |
112 | GO:0010025: wax biosynthetic process | 1.33E-02 |
113 | GO:0061077: chaperone-mediated protein folding | 1.64E-02 |
114 | GO:0009269: response to desiccation | 1.64E-02 |
115 | GO:0016226: iron-sulfur cluster assembly | 1.75E-02 |
116 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.75E-02 |
117 | GO:0070417: cellular response to cold | 2.09E-02 |
118 | GO:0042631: cellular response to water deprivation | 2.21E-02 |
119 | GO:0042335: cuticle development | 2.21E-02 |
120 | GO:0000413: protein peptidyl-prolyl isomerization | 2.21E-02 |
121 | GO:0006629: lipid metabolic process | 2.32E-02 |
122 | GO:0071472: cellular response to salt stress | 2.33E-02 |
123 | GO:0006662: glycerol ether metabolic process | 2.33E-02 |
124 | GO:0015986: ATP synthesis coupled proton transport | 2.45E-02 |
125 | GO:0019252: starch biosynthetic process | 2.58E-02 |
126 | GO:0005975: carbohydrate metabolic process | 2.58E-02 |
127 | GO:0010193: response to ozone | 2.71E-02 |
128 | GO:0032502: developmental process | 2.84E-02 |
129 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 3.66E-02 |
130 | GO:0042128: nitrate assimilation | 3.80E-02 |
131 | GO:0042742: defense response to bacterium | 3.88E-02 |
132 | GO:0016311: dephosphorylation | 4.10E-02 |
133 | GO:0009817: defense response to fungus, incompatible interaction | 4.25E-02 |
134 | GO:0018298: protein-chromophore linkage | 4.25E-02 |
135 | GO:0010311: lateral root formation | 4.40E-02 |
136 | GO:0010218: response to far red light | 4.55E-02 |
137 | GO:0009631: cold acclimation | 4.71E-02 |
138 | GO:0009611: response to wounding | 4.84E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
2 | GO:0008887: glycerate kinase activity | 0.00E+00 |
3 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
4 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
5 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
6 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
7 | GO:0015142: tricarboxylic acid transmembrane transporter activity | 0.00E+00 |
8 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
9 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
10 | GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity | 0.00E+00 |
11 | GO:0019843: rRNA binding | 6.19E-07 |
12 | GO:0004565: beta-galactosidase activity | 4.38E-05 |
13 | GO:0009011: starch synthase activity | 4.98E-05 |
14 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.98E-05 |
15 | GO:0004332: fructose-bisphosphate aldolase activity | 1.15E-04 |
16 | GO:0008184: glycogen phosphorylase activity | 2.72E-04 |
17 | GO:0045485: omega-6 fatty acid desaturase activity | 2.72E-04 |
18 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.72E-04 |
19 | GO:0004645: phosphorylase activity | 2.72E-04 |
20 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 2.72E-04 |
21 | GO:0009374: biotin binding | 2.72E-04 |
22 | GO:0015168: glycerol transmembrane transporter activity | 2.72E-04 |
23 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 2.72E-04 |
24 | GO:0005344: oxygen transporter activity | 2.72E-04 |
25 | GO:0035671: enone reductase activity | 2.72E-04 |
26 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 2.72E-04 |
27 | GO:0030234: enzyme regulator activity | 5.39E-04 |
28 | GO:0003735: structural constituent of ribosome | 5.84E-04 |
29 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.99E-04 |
30 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.99E-04 |
31 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 5.99E-04 |
32 | GO:0008883: glutamyl-tRNA reductase activity | 5.99E-04 |
33 | GO:0047746: chlorophyllase activity | 5.99E-04 |
34 | GO:0042389: omega-3 fatty acid desaturase activity | 5.99E-04 |
35 | GO:0010297: heteropolysaccharide binding | 5.99E-04 |
36 | GO:0003839: gamma-glutamylcyclotransferase activity | 5.99E-04 |
37 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.99E-04 |
38 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.99E-04 |
39 | GO:0033201: alpha-1,4-glucan synthase activity | 5.99E-04 |
40 | GO:0047372: acylglycerol lipase activity | 6.22E-04 |
41 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 9.72E-04 |
42 | GO:0004373: glycogen (starch) synthase activity | 9.72E-04 |
43 | GO:0050734: hydroxycinnamoyltransferase activity | 9.72E-04 |
44 | GO:0004751: ribose-5-phosphate isomerase activity | 9.72E-04 |
45 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 9.72E-04 |
46 | GO:0031409: pigment binding | 1.12E-03 |
47 | GO:0005528: FK506 binding | 1.24E-03 |
48 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.39E-03 |
49 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.39E-03 |
50 | GO:0016851: magnesium chelatase activity | 1.39E-03 |
51 | GO:0016149: translation release factor activity, codon specific | 1.39E-03 |
52 | GO:0046715: borate transmembrane transporter activity | 1.39E-03 |
53 | GO:0017077: oxidative phosphorylation uncoupler activity | 1.39E-03 |
54 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.64E-03 |
55 | GO:0015204: urea transmembrane transporter activity | 1.86E-03 |
56 | GO:0008168: methyltransferase activity | 2.15E-03 |
57 | GO:0003989: acetyl-CoA carboxylase activity | 2.37E-03 |
58 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.93E-03 |
59 | GO:0004784: superoxide dismutase activity | 2.93E-03 |
60 | GO:0016615: malate dehydrogenase activity | 2.93E-03 |
61 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.93E-03 |
62 | GO:0048038: quinone binding | 3.02E-03 |
63 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.52E-03 |
64 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.52E-03 |
65 | GO:0102391: decanoate--CoA ligase activity | 3.52E-03 |
66 | GO:0030060: L-malate dehydrogenase activity | 3.52E-03 |
67 | GO:0004467: long-chain fatty acid-CoA ligase activity | 4.15E-03 |
68 | GO:0016168: chlorophyll binding | 4.61E-03 |
69 | GO:0008271: secondary active sulfate transmembrane transporter activity | 5.52E-03 |
70 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.52E-03 |
71 | GO:0003747: translation release factor activity | 6.25E-03 |
72 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 7.03E-03 |
73 | GO:0008047: enzyme activator activity | 7.82E-03 |
74 | GO:0050661: NADP binding | 8.22E-03 |
75 | GO:0015116: sulfate transmembrane transporter activity | 9.52E-03 |
76 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.01E-02 |
77 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.04E-02 |
78 | GO:0031072: heat shock protein binding | 1.04E-02 |
79 | GO:0005509: calcium ion binding | 1.10E-02 |
80 | GO:0008266: poly(U) RNA binding | 1.13E-02 |
81 | GO:0051287: NAD binding | 1.13E-02 |
82 | GO:0051536: iron-sulfur cluster binding | 1.43E-02 |
83 | GO:0003727: single-stranded RNA binding | 1.97E-02 |
84 | GO:0016491: oxidoreductase activity | 2.03E-02 |
85 | GO:0047134: protein-disulfide reductase activity | 2.09E-02 |
86 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.33E-02 |
87 | GO:0050662: coenzyme binding | 2.45E-02 |
88 | GO:0004791: thioredoxin-disulfide reductase activity | 2.45E-02 |
89 | GO:0016853: isomerase activity | 2.45E-02 |
90 | GO:0004872: receptor activity | 2.58E-02 |
91 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.97E-02 |
92 | GO:0016791: phosphatase activity | 3.10E-02 |
93 | GO:0016597: amino acid binding | 3.38E-02 |
94 | GO:0015250: water channel activity | 3.52E-02 |
95 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 4.10E-02 |
96 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 4.10E-02 |
97 | GO:0004222: metalloendopeptidase activity | 4.55E-02 |
98 | GO:0016788: hydrolase activity, acting on ester bonds | 4.86E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009575: chromoplast stroma | 0.00E+00 |
2 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
3 | GO:0042579: microbody | 0.00E+00 |
4 | GO:0009507: chloroplast | 2.68E-62 |
5 | GO:0009535: chloroplast thylakoid membrane | 2.05E-44 |
6 | GO:0009534: chloroplast thylakoid | 5.38E-37 |
7 | GO:0009579: thylakoid | 7.20E-31 |
8 | GO:0009941: chloroplast envelope | 8.22E-29 |
9 | GO:0009543: chloroplast thylakoid lumen | 9.10E-19 |
10 | GO:0031977: thylakoid lumen | 6.81E-15 |
11 | GO:0009570: chloroplast stroma | 6.99E-15 |
12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.37E-12 |
13 | GO:0009654: photosystem II oxygen evolving complex | 1.10E-09 |
14 | GO:0010287: plastoglobule | 5.11E-07 |
15 | GO:0019898: extrinsic component of membrane | 5.99E-07 |
16 | GO:0030095: chloroplast photosystem II | 1.35E-06 |
17 | GO:0031969: chloroplast membrane | 1.60E-05 |
18 | GO:0005840: ribosome | 1.67E-05 |
19 | GO:0048046: apoplast | 1.09E-04 |
20 | GO:0005787: signal peptidase complex | 2.72E-04 |
21 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.72E-04 |
22 | GO:0009547: plastid ribosome | 2.72E-04 |
23 | GO:0010319: stromule | 4.51E-04 |
24 | GO:0009706: chloroplast inner membrane | 5.13E-04 |
25 | GO:0031357: integral component of chloroplast inner membrane | 5.99E-04 |
26 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 5.99E-04 |
27 | GO:0010007: magnesium chelatase complex | 9.72E-04 |
28 | GO:0009317: acetyl-CoA carboxylase complex | 9.72E-04 |
29 | GO:0030076: light-harvesting complex | 1.01E-03 |
30 | GO:0005960: glycine cleavage complex | 1.39E-03 |
31 | GO:0009517: PSII associated light-harvesting complex II | 1.86E-03 |
32 | GO:0009544: chloroplast ATP synthase complex | 1.86E-03 |
33 | GO:0009523: photosystem II | 2.82E-03 |
34 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.93E-03 |
35 | GO:0009501: amyloplast | 4.82E-03 |
36 | GO:0009539: photosystem II reaction center | 5.52E-03 |
37 | GO:0005763: mitochondrial small ribosomal subunit | 6.25E-03 |
38 | GO:0000311: plastid large ribosomal subunit | 9.52E-03 |
39 | GO:0032040: small-subunit processome | 9.52E-03 |
40 | GO:0043234: protein complex | 1.33E-02 |
41 | GO:0042651: thylakoid membrane | 1.53E-02 |
42 | GO:0015935: small ribosomal subunit | 1.64E-02 |
43 | GO:0009522: photosystem I | 2.45E-02 |
44 | GO:0016021: integral component of membrane | 3.07E-02 |
45 | GO:0015934: large ribosomal subunit | 4.71E-02 |