co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G19050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
2	GO:0009773: photosynthetic electron transport in photosystem I	1.70E-06
3	GO:0009642: response to light intensity	4.22E-05
4	GO:0032259: methylation	5.00E-05
5	GO:0015995: chlorophyll biosynthetic process	6.65E-05
6	GO:0000023: maltose metabolic process	8.25E-05
7	GO:0000025: maltose catabolic process	8.25E-05
8	GO:0071277: cellular response to calcium ion	8.25E-05
9	GO:0043085: positive regulation of catalytic activity	1.14E-04
10	GO:0055114: oxidation-reduction process	1.49E-04
11	GO:0005976: polysaccharide metabolic process	1.97E-04
12	GO:0006636: unsaturated fatty acid biosynthetic process	2.22E-04
13	GO:0090391: granum assembly	3.29E-04
14	GO:0006081: cellular aldehyde metabolic process	3.29E-04
15	GO:0071484: cellular response to light intensity	4.75E-04
16	GO:0006662: glycerol ether metabolic process	4.96E-04
17	GO:0006021: inositol biosynthetic process	6.32E-04
18	GO:0006109: regulation of carbohydrate metabolic process	6.32E-04
19	GO:0006633: fatty acid biosynthetic process	6.81E-04
20	GO:0010117: photoprotection	8.00E-04
21	GO:0006656: phosphatidylcholine biosynthetic process	8.00E-04
22	GO:0009972: cytidine deamination	9.77E-04
23	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	9.77E-04
24	GO:0010189: vitamin E biosynthetic process	1.16E-03
25	GO:1900057: positive regulation of leaf senescence	1.36E-03
26	GO:0009395: phospholipid catabolic process	1.36E-03
27	GO:0010196: nonphotochemical quenching	1.36E-03
28	GO:0034599: cellular response to oxidative stress	1.46E-03
29	GO:0030091: protein repair	1.57E-03
30	GO:0009704: de-etiolation	1.57E-03
31	GO:0009644: response to high light intensity	1.94E-03
32	GO:0010206: photosystem II repair	2.02E-03
33	GO:0090333: regulation of stomatal closure	2.02E-03
34	GO:0006783: heme biosynthetic process	2.02E-03
35	GO:0009051: pentose-phosphate shunt, oxidative branch	2.02E-03
36	GO:0015979: photosynthesis	2.03E-03
37	GO:0006779: porphyrin-containing compound biosynthetic process	2.26E-03
38	GO:0006535: cysteine biosynthetic process from serine	2.51E-03
39	GO:0009641: shade avoidance	2.51E-03
40	GO:0006782: protoporphyrinogen IX biosynthetic process	2.51E-03
41	GO:0000038: very long-chain fatty acid metabolic process	2.77E-03
42	GO:0009698: phenylpropanoid metabolic process	2.77E-03
43	GO:0006096: glycolytic process	2.83E-03
44	GO:0043086: negative regulation of catalytic activity	2.83E-03
45	GO:0005983: starch catabolic process	3.03E-03
46	GO:0006006: glucose metabolic process	3.31E-03
47	GO:0006094: gluconeogenesis	3.31E-03
48	GO:0010207: photosystem II assembly	3.59E-03
49	GO:0010223: secondary shoot formation	3.59E-03
50	GO:0009266: response to temperature stimulus	3.59E-03
51	GO:0010143: cutin biosynthetic process	3.59E-03
52	GO:0019253: reductive pentose-phosphate cycle	3.59E-03
53	GO:0010025: wax biosynthetic process	4.18E-03
54	GO:0019762: glucosinolate catabolic process	4.18E-03
55	GO:0019344: cysteine biosynthetic process	4.48E-03
56	GO:0007017: microtubule-based process	4.80E-03
57	GO:0016998: cell wall macromolecule catabolic process	5.12E-03
58	GO:0030433: ubiquitin-dependent ERAD pathway	5.45E-03
59	GO:0019748: secondary metabolic process	5.45E-03
60	GO:0042335: cuticle development	6.83E-03
61	GO:0048868: pollen tube development	7.20E-03
62	GO:0009741: response to brassinosteroid	7.20E-03
63	GO:0019252: starch biosynthetic process	7.95E-03
64	GO:0008654: phospholipid biosynthetic process	7.95E-03
65	GO:0009630: gravitropism	8.73E-03
66	GO:0051607: defense response to virus	1.04E-02
67	GO:0010027: thylakoid membrane organization	1.08E-02
68	GO:0080167: response to karrikin	1.12E-02
69	GO:0010411: xyloglucan metabolic process	1.21E-02
70	GO:0016311: dephosphorylation	1.26E-02
71	GO:0045454: cell redox homeostasis	1.35E-02
72	GO:0010311: lateral root formation	1.35E-02
73	GO:0006631: fatty acid metabolic process	1.74E-02
74	GO:0042542: response to hydrogen peroxide	1.79E-02
75	GO:0010114: response to red light	1.84E-02
76	GO:0051707: response to other organism	1.84E-02
77	GO:0042546: cell wall biogenesis	1.89E-02
78	GO:0000209: protein polyubiquitination	1.89E-02
79	GO:0006364: rRNA processing	2.28E-02
80	GO:0006857: oligopeptide transport	2.39E-02
81	GO:0005975: carbohydrate metabolic process	2.40E-02
82	GO:0042545: cell wall modification	2.86E-02
83	GO:0009416: response to light stimulus	2.95E-02
84	GO:0009793: embryo development ending in seed dormancy	4.05E-02
85	GO:0016036: cellular response to phosphate starvation	4.11E-02
86	GO:0045490: pectin catabolic process	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
2	GO:0045550: geranylgeranyl reductase activity	0.00E+00
3	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
4	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
5	GO:0030794: (S)-coclaurine-N-methyltransferase activity	0.00E+00
6	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
7	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
8	GO:0033840: NDP-glucose-starch glucosyltransferase activity	0.00E+00
9	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	8.11E-05
10	GO:0004134: 4-alpha-glucanotransferase activity	8.25E-05
11	GO:0035671: enone reductase activity	8.25E-05
12	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	8.25E-05
13	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	8.25E-05
14	GO:0031957: very long-chain fatty acid-CoA ligase activity	8.25E-05
15	GO:0008047: enzyme activator activity	9.71E-05
16	GO:0004565: beta-galactosidase activity	1.54E-04
17	GO:0008168: methyltransferase activity	1.61E-04
18	GO:0000234: phosphoethanolamine N-methyltransferase activity	1.97E-04
19	GO:0050017: L-3-cyanoalanine synthase activity	1.97E-04
20	GO:0008883: glutamyl-tRNA reductase activity	1.97E-04
21	GO:0042389: omega-3 fatty acid desaturase activity	1.97E-04
22	GO:0010297: heteropolysaccharide binding	1.97E-04
23	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.97E-04
24	GO:0004512: inositol-3-phosphate synthase activity	1.97E-04
25	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.97E-04
26	GO:0018708: thiol S-methyltransferase activity	1.97E-04
27	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	3.29E-04
28	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.29E-04
29	GO:0004373: glycogen (starch) synthase activity	3.29E-04
30	GO:0047134: protein-disulfide reductase activity	4.26E-04
31	GO:0017057: 6-phosphogluconolactonase activity	4.75E-04
32	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.75E-04
33	GO:0004791: thioredoxin-disulfide reductase activity	5.32E-04
34	GO:0009011: starch synthase activity	6.32E-04
35	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.90E-04
36	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	8.00E-04
37	GO:0009922: fatty acid elongase activity	8.00E-04
38	GO:0004029: aldehyde dehydrogenase (NAD) activity	9.77E-04
39	GO:2001070: starch binding	9.77E-04
40	GO:0004332: fructose-bisphosphate aldolase activity	9.77E-04
41	GO:0004124: cysteine synthase activity	1.16E-03
42	GO:0004126: cytidine deaminase activity	1.16E-03
43	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.16E-03
44	GO:0102391: decanoate--CoA ligase activity	1.16E-03
45	GO:0004467: long-chain fatty acid-CoA ligase activity	1.36E-03
46	GO:0003993: acid phosphatase activity	1.46E-03
47	GO:0050661: NADP binding	1.59E-03
48	GO:0004185: serine-type carboxypeptidase activity	1.79E-03
49	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.79E-03
50	GO:0015035: protein disulfide oxidoreductase activity	3.50E-03
51	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.18E-03
52	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.18E-03
53	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.18E-03
54	GO:0004857: enzyme inhibitor activity	4.48E-03
55	GO:0042802: identical protein binding	7.43E-03
56	GO:0016762: xyloglucan:xyloglucosyl transferase activity	8.33E-03
57	GO:0016788: hydrolase activity, acting on ester bonds	9.22E-03
58	GO:0005200: structural constituent of cytoskeleton	9.94E-03
59	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.21E-02
60	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.26E-02
61	GO:0051287: NAD binding	2.11E-02
62	GO:0031625: ubiquitin protein ligase binding	2.45E-02
63	GO:0045330: aspartyl esterase activity	2.45E-02
64	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.62E-02
65	GO:0030599: pectinesterase activity	2.80E-02
66	GO:0030170: pyridoxal phosphate binding	3.70E-02
67	GO:0046910: pectinesterase inhibitor activity	4.11E-02
68	GO:0003743: translation initiation factor activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	9.22E-16
2	GO:0009507: chloroplast	1.57E-10
3	GO:0009535: chloroplast thylakoid membrane	2.86E-06
4	GO:0031969: chloroplast membrane	2.26E-05
5	GO:0009579: thylakoid	3.32E-05
6	GO:0009515: granal stacked thylakoid	8.25E-05
7	GO:0009569: chloroplast starch grain	1.97E-04
8	GO:0048046: apoplast	4.84E-04
9	GO:0009543: chloroplast thylakoid lumen	5.12E-04
10	GO:0009941: chloroplast envelope	8.55E-04
11	GO:0031977: thylakoid lumen	1.66E-03
12	GO:0008180: COP9 signalosome	2.02E-03
13	GO:0045298: tubulin complex	2.02E-03
14	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.02E-03
15	GO:0043234: protein complex	4.18E-03
16	GO:0005623: cell	4.36E-03
17	GO:0009654: photosystem II oxygen evolving complex	4.80E-03
18	GO:0005618: cell wall	7.50E-03
19	GO:0019898: extrinsic component of membrane	7.95E-03
20	GO:0010319: stromule	9.94E-03
21	GO:0019005: SCF ubiquitin ligase complex	1.30E-02
22	GO:0009570: chloroplast stroma	1.79E-02
23	GO:0009505: plant-type cell wall	1.89E-02
24	GO:0005783: endoplasmic reticulum	1.99E-02
25	GO:0000502: proteasome complex	2.28E-02
26	GO:0010287: plastoglobule	3.30E-02
27	GO:0005773: vacuole	3.85E-02