GO Enrichment Analysis of Co-expressed Genes with
AT1G17920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 2 | GO:0006907: pinocytosis | 0.00E+00 |
| 3 | GO:0042352: GDP-L-fucose salvage | 0.00E+00 |
| 4 | GO:0000819: sister chromatid segregation | 0.00E+00 |
| 5 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 6 | GO:0044774: mitotic DNA integrity checkpoint | 0.00E+00 |
| 7 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 8 | GO:0010583: response to cyclopentenone | 1.54E-07 |
| 9 | GO:0043039: tRNA aminoacylation | 7.60E-06 |
| 10 | GO:0010588: cotyledon vascular tissue pattern formation | 1.11E-04 |
| 11 | GO:0006426: glycyl-tRNA aminoacylation | 4.13E-04 |
| 12 | GO:0051641: cellular localization | 4.13E-04 |
| 13 | GO:0015904: tetracycline transport | 4.13E-04 |
| 14 | GO:0048016: inositol phosphate-mediated signaling | 4.13E-04 |
| 15 | GO:0006434: seryl-tRNA aminoacylation | 4.13E-04 |
| 16 | GO:0006438: valyl-tRNA aminoacylation | 4.13E-04 |
| 17 | GO:0046520: sphingoid biosynthetic process | 4.13E-04 |
| 18 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 4.13E-04 |
| 19 | GO:0007018: microtubule-based movement | 5.95E-04 |
| 20 | GO:0009793: embryo development ending in seed dormancy | 6.19E-04 |
| 21 | GO:0080009: mRNA methylation | 8.93E-04 |
| 22 | GO:0009786: regulation of asymmetric cell division | 8.93E-04 |
| 23 | GO:2000123: positive regulation of stomatal complex development | 8.93E-04 |
| 24 | GO:1901529: positive regulation of anion channel activity | 8.93E-04 |
| 25 | GO:0006423: cysteinyl-tRNA aminoacylation | 8.93E-04 |
| 26 | GO:0048829: root cap development | 9.73E-04 |
| 27 | GO:0006949: syncytium formation | 9.73E-04 |
| 28 | GO:0000910: cytokinesis | 1.05E-03 |
| 29 | GO:0030261: chromosome condensation | 1.45E-03 |
| 30 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 1.45E-03 |
| 31 | GO:0010226: response to lithium ion | 1.45E-03 |
| 32 | GO:0016045: detection of bacterium | 1.45E-03 |
| 33 | GO:0010020: chloroplast fission | 1.64E-03 |
| 34 | GO:0009558: embryo sac cellularization | 2.10E-03 |
| 35 | GO:0009734: auxin-activated signaling pathway | 2.10E-03 |
| 36 | GO:0010321: regulation of vegetative phase change | 2.10E-03 |
| 37 | GO:0043207: response to external biotic stimulus | 2.10E-03 |
| 38 | GO:0007276: gamete generation | 2.10E-03 |
| 39 | GO:0016556: mRNA modification | 2.10E-03 |
| 40 | GO:0006424: glutamyl-tRNA aminoacylation | 2.10E-03 |
| 41 | GO:0019953: sexual reproduction | 2.50E-03 |
| 42 | GO:0006418: tRNA aminoacylation for protein translation | 2.50E-03 |
| 43 | GO:0006808: regulation of nitrogen utilization | 2.82E-03 |
| 44 | GO:0048629: trichome patterning | 2.82E-03 |
| 45 | GO:0000914: phragmoplast assembly | 2.82E-03 |
| 46 | GO:0007020: microtubule nucleation | 2.82E-03 |
| 47 | GO:0031122: cytoplasmic microtubule organization | 2.82E-03 |
| 48 | GO:2000038: regulation of stomatal complex development | 2.82E-03 |
| 49 | GO:0042991: transcription factor import into nucleus | 2.82E-03 |
| 50 | GO:0007005: mitochondrion organization | 3.01E-03 |
| 51 | GO:0042127: regulation of cell proliferation | 3.58E-03 |
| 52 | GO:0048497: maintenance of floral organ identity | 3.61E-03 |
| 53 | GO:0007094: mitotic spindle assembly checkpoint | 3.61E-03 |
| 54 | GO:0032957: inositol trisphosphate metabolic process | 3.61E-03 |
| 55 | GO:0010375: stomatal complex patterning | 3.61E-03 |
| 56 | GO:0046785: microtubule polymerization | 3.61E-03 |
| 57 | GO:0016042: lipid catabolic process | 3.82E-03 |
| 58 | GO:0051301: cell division | 3.93E-03 |
| 59 | GO:0009736: cytokinin-activated signaling pathway | 4.32E-03 |
| 60 | GO:0010405: arabinogalactan protein metabolic process | 4.47E-03 |
| 61 | GO:0016554: cytidine to uridine editing | 4.47E-03 |
| 62 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 4.47E-03 |
| 63 | GO:0009913: epidermal cell differentiation | 4.47E-03 |
| 64 | GO:0046855: inositol phosphate dephosphorylation | 4.47E-03 |
| 65 | GO:1902456: regulation of stomatal opening | 4.47E-03 |
| 66 | GO:0010305: leaf vascular tissue pattern formation | 4.52E-03 |
| 67 | GO:0048825: cotyledon development | 5.21E-03 |
| 68 | GO:0009099: valine biosynthetic process | 5.38E-03 |
| 69 | GO:0010067: procambium histogenesis | 5.38E-03 |
| 70 | GO:0009082: branched-chain amino acid biosynthetic process | 5.38E-03 |
| 71 | GO:0009658: chloroplast organization | 5.86E-03 |
| 72 | GO:0010444: guard mother cell differentiation | 6.36E-03 |
| 73 | GO:0010103: stomatal complex morphogenesis | 6.36E-03 |
| 74 | GO:0000712: resolution of meiotic recombination intermediates | 6.36E-03 |
| 75 | GO:0045995: regulation of embryonic development | 6.36E-03 |
| 76 | GO:1900056: negative regulation of leaf senescence | 6.36E-03 |
| 77 | GO:0030497: fatty acid elongation | 6.36E-03 |
| 78 | GO:0000082: G1/S transition of mitotic cell cycle | 6.36E-03 |
| 79 | GO:0010098: suspensor development | 6.36E-03 |
| 80 | GO:0009828: plant-type cell wall loosening | 6.77E-03 |
| 81 | GO:0051726: regulation of cell cycle | 7.29E-03 |
| 82 | GO:0010492: maintenance of shoot apical meristem identity | 7.40E-03 |
| 83 | GO:0046620: regulation of organ growth | 7.40E-03 |
| 84 | GO:0001522: pseudouridine synthesis | 7.40E-03 |
| 85 | GO:0009097: isoleucine biosynthetic process | 8.49E-03 |
| 86 | GO:0009657: plastid organization | 8.49E-03 |
| 87 | GO:0010332: response to gamma radiation | 9.65E-03 |
| 88 | GO:0048481: plant ovule development | 1.06E-02 |
| 89 | GO:1900865: chloroplast RNA modification | 1.09E-02 |
| 90 | GO:0007346: regulation of mitotic cell cycle | 1.09E-02 |
| 91 | GO:0000160: phosphorelay signal transduction system | 1.11E-02 |
| 92 | GO:0010311: lateral root formation | 1.11E-02 |
| 93 | GO:0009641: shade avoidance | 1.21E-02 |
| 94 | GO:0006259: DNA metabolic process | 1.21E-02 |
| 95 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.21E-02 |
| 96 | GO:0040008: regulation of growth | 1.28E-02 |
| 97 | GO:0006865: amino acid transport | 1.28E-02 |
| 98 | GO:0071555: cell wall organization | 1.32E-02 |
| 99 | GO:0048229: gametophyte development | 1.34E-02 |
| 100 | GO:0046856: phosphatidylinositol dephosphorylation | 1.34E-02 |
| 101 | GO:0006265: DNA topological change | 1.34E-02 |
| 102 | GO:0009451: RNA modification | 1.40E-02 |
| 103 | GO:0006312: mitotic recombination | 1.48E-02 |
| 104 | GO:0012501: programmed cell death | 1.48E-02 |
| 105 | GO:0048364: root development | 1.56E-02 |
| 106 | GO:2000012: regulation of auxin polar transport | 1.62E-02 |
| 107 | GO:0010102: lateral root morphogenesis | 1.62E-02 |
| 108 | GO:0009733: response to auxin | 1.65E-02 |
| 109 | GO:0009887: animal organ morphogenesis | 1.76E-02 |
| 110 | GO:0009266: response to temperature stimulus | 1.76E-02 |
| 111 | GO:0006302: double-strand break repair | 1.76E-02 |
| 112 | GO:0048768: root hair cell tip growth | 1.76E-02 |
| 113 | GO:0007034: vacuolar transport | 1.76E-02 |
| 114 | GO:0090351: seedling development | 1.91E-02 |
| 115 | GO:0080188: RNA-directed DNA methylation | 1.91E-02 |
| 116 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.06E-02 |
| 117 | GO:0006863: purine nucleobase transport | 2.06E-02 |
| 118 | GO:0006833: water transport | 2.06E-02 |
| 119 | GO:0009664: plant-type cell wall organization | 2.18E-02 |
| 120 | GO:0080147: root hair cell development | 2.22E-02 |
| 121 | GO:0007017: microtubule-based process | 2.38E-02 |
| 122 | GO:0003333: amino acid transmembrane transport | 2.55E-02 |
| 123 | GO:0051321: meiotic cell cycle | 2.55E-02 |
| 124 | GO:0009686: gibberellin biosynthetic process | 2.89E-02 |
| 125 | GO:0010082: regulation of root meristem growth | 2.89E-02 |
| 126 | GO:0009553: embryo sac development | 3.24E-02 |
| 127 | GO:0009624: response to nematode | 3.34E-02 |
| 128 | GO:0006351: transcription, DNA-templated | 3.36E-02 |
| 129 | GO:0080022: primary root development | 3.44E-02 |
| 130 | GO:0034220: ion transmembrane transport | 3.44E-02 |
| 131 | GO:0010051: xylem and phloem pattern formation | 3.44E-02 |
| 132 | GO:0010087: phloem or xylem histogenesis | 3.44E-02 |
| 133 | GO:0010118: stomatal movement | 3.44E-02 |
| 134 | GO:0009741: response to brassinosteroid | 3.63E-02 |
| 135 | GO:0009958: positive gravitropism | 3.63E-02 |
| 136 | GO:0007059: chromosome segregation | 3.82E-02 |
| 137 | GO:0045892: negative regulation of transcription, DNA-templated | 3.94E-02 |
| 138 | GO:0071554: cell wall organization or biogenesis | 4.21E-02 |
| 139 | GO:0009058: biosynthetic process | 4.39E-02 |
| 140 | GO:0032502: developmental process | 4.41E-02 |
| 141 | GO:1901657: glycosyl compound metabolic process | 4.62E-02 |
| 142 | GO:0030163: protein catabolic process | 4.62E-02 |
| 143 | GO:0019760: glucosinolate metabolic process | 4.83E-02 |
| 144 | GO:0009790: embryo development | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 2 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 3 | GO:0047793: cycloeucalenol cycloisomerase activity | 0.00E+00 |
| 4 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 5 | GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity | 0.00E+00 |
| 6 | GO:0047341: fucose-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 7 | GO:0050201: fucokinase activity | 0.00E+00 |
| 8 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 9 | GO:0004176: ATP-dependent peptidase activity | 2.81E-04 |
| 10 | GO:0004832: valine-tRNA ligase activity | 4.13E-04 |
| 11 | GO:0004820: glycine-tRNA ligase activity | 4.13E-04 |
| 12 | GO:0000170: sphingosine hydroxylase activity | 4.13E-04 |
| 13 | GO:0004828: serine-tRNA ligase activity | 4.13E-04 |
| 14 | GO:0046030: inositol trisphosphate phosphatase activity | 4.13E-04 |
| 15 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 4.13E-04 |
| 16 | GO:0004160: dihydroxy-acid dehydratase activity | 4.13E-04 |
| 17 | GO:0004818: glutamate-tRNA ligase activity | 4.13E-04 |
| 18 | GO:0009374: biotin binding | 4.13E-04 |
| 19 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 5.42E-04 |
| 20 | GO:0004817: cysteine-tRNA ligase activity | 8.93E-04 |
| 21 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 8.93E-04 |
| 22 | GO:0004109: coproporphyrinogen oxidase activity | 8.93E-04 |
| 23 | GO:0003777: microtubule motor activity | 8.93E-04 |
| 24 | GO:0042284: sphingolipid delta-4 desaturase activity | 8.93E-04 |
| 25 | GO:0008493: tetracycline transporter activity | 8.93E-04 |
| 26 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 8.93E-04 |
| 27 | GO:0008237: metallopeptidase activity | 9.75E-04 |
| 28 | GO:0004519: endonuclease activity | 1.25E-03 |
| 29 | GO:0017150: tRNA dihydrouridine synthase activity | 1.45E-03 |
| 30 | GO:0001872: (1->3)-beta-D-glucan binding | 2.10E-03 |
| 31 | GO:0003916: DNA topoisomerase activity | 2.10E-03 |
| 32 | GO:0052689: carboxylic ester hydrolase activity | 2.42E-03 |
| 33 | GO:0016887: ATPase activity | 2.54E-03 |
| 34 | GO:0008408: 3'-5' exonuclease activity | 2.75E-03 |
| 35 | GO:0004335: galactokinase activity | 2.82E-03 |
| 36 | GO:0016836: hydro-lyase activity | 2.82E-03 |
| 37 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 2.82E-03 |
| 38 | GO:0019199: transmembrane receptor protein kinase activity | 2.82E-03 |
| 39 | GO:0008017: microtubule binding | 3.22E-03 |
| 40 | GO:0005515: protein binding | 3.37E-03 |
| 41 | GO:0003989: acetyl-CoA carboxylase activity | 3.61E-03 |
| 42 | GO:0004812: aminoacyl-tRNA ligase activity | 3.87E-03 |
| 43 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 4.47E-03 |
| 44 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 4.47E-03 |
| 45 | GO:0003723: RNA binding | 4.55E-03 |
| 46 | GO:0009055: electron carrier activity | 4.55E-03 |
| 47 | GO:0016832: aldehyde-lyase activity | 5.38E-03 |
| 48 | GO:0005524: ATP binding | 5.68E-03 |
| 49 | GO:0016788: hydrolase activity, acting on ester bonds | 6.03E-03 |
| 50 | GO:0000156: phosphorelay response regulator activity | 6.36E-03 |
| 51 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 8.49E-03 |
| 52 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 8.49E-03 |
| 53 | GO:0042803: protein homodimerization activity | 1.15E-02 |
| 54 | GO:0004222: metalloendopeptidase activity | 1.17E-02 |
| 55 | GO:0004722: protein serine/threonine phosphatase activity | 1.23E-02 |
| 56 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.34E-02 |
| 57 | GO:0003697: single-stranded DNA binding | 1.34E-02 |
| 58 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 1.48E-02 |
| 59 | GO:0000049: tRNA binding | 1.48E-02 |
| 60 | GO:0009982: pseudouridine synthase activity | 1.62E-02 |
| 61 | GO:0003725: double-stranded RNA binding | 1.62E-02 |
| 62 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.76E-02 |
| 63 | GO:0043621: protein self-association | 1.88E-02 |
| 64 | GO:0004190: aspartic-type endopeptidase activity | 1.91E-02 |
| 65 | GO:0003712: transcription cofactor activity | 1.91E-02 |
| 66 | GO:0005198: structural molecule activity | 1.95E-02 |
| 67 | GO:0051087: chaperone binding | 2.38E-02 |
| 68 | GO:0005345: purine nucleobase transmembrane transporter activity | 2.38E-02 |
| 69 | GO:0004707: MAP kinase activity | 2.55E-02 |
| 70 | GO:0008094: DNA-dependent ATPase activity | 2.55E-02 |
| 71 | GO:0015171: amino acid transmembrane transporter activity | 2.60E-02 |
| 72 | GO:0030570: pectate lyase activity | 2.89E-02 |
| 73 | GO:0004650: polygalacturonase activity | 3.05E-02 |
| 74 | GO:0003727: single-stranded RNA binding | 3.07E-02 |
| 75 | GO:0003779: actin binding | 3.24E-02 |
| 76 | GO:0015035: protein disulfide oxidoreductase activity | 3.44E-02 |
| 77 | GO:0004527: exonuclease activity | 3.63E-02 |
| 78 | GO:0005199: structural constituent of cell wall | 3.63E-02 |
| 79 | GO:0001085: RNA polymerase II transcription factor binding | 3.63E-02 |
| 80 | GO:0016853: isomerase activity | 3.82E-02 |
| 81 | GO:0019901: protein kinase binding | 4.01E-02 |
| 82 | GO:0004518: nuclease activity | 4.41E-02 |
| 83 | GO:0051015: actin filament binding | 4.62E-02 |
| 84 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.74E-02 |
| 85 | GO:0016759: cellulose synthase activity | 4.83E-02 |
| 86 | GO:0016791: phosphatase activity | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000408: EKC/KEOPS complex | 0.00E+00 |
| 2 | GO:0000796: condensin complex | 4.13E-04 |
| 3 | GO:0000791: euchromatin | 4.13E-04 |
| 4 | GO:0005871: kinesin complex | 4.45E-04 |
| 5 | GO:0005874: microtubule | 4.56E-04 |
| 6 | GO:0030870: Mre11 complex | 8.93E-04 |
| 7 | GO:0031357: integral component of chloroplast inner membrane | 8.93E-04 |
| 8 | GO:0030139: endocytic vesicle | 1.45E-03 |
| 9 | GO:0009317: acetyl-CoA carboxylase complex | 1.45E-03 |
| 10 | GO:0032585: multivesicular body membrane | 2.10E-03 |
| 11 | GO:0009536: plastid | 2.48E-03 |
| 12 | GO:0005828: kinetochore microtubule | 2.82E-03 |
| 13 | GO:0000930: gamma-tubulin complex | 2.82E-03 |
| 14 | GO:0030286: dynein complex | 2.82E-03 |
| 15 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 2.82E-03 |
| 16 | GO:0000795: synaptonemal complex | 3.61E-03 |
| 17 | GO:0000776: kinetochore | 3.61E-03 |
| 18 | GO:0000793: condensed chromosome | 4.47E-03 |
| 19 | GO:0046658: anchored component of plasma membrane | 4.61E-03 |
| 20 | GO:0000777: condensed chromosome kinetochore | 5.38E-03 |
| 21 | GO:0000815: ESCRT III complex | 5.38E-03 |
| 22 | GO:0010369: chromocenter | 5.38E-03 |
| 23 | GO:0005655: nucleolar ribonuclease P complex | 5.38E-03 |
| 24 | GO:0009986: cell surface | 6.36E-03 |
| 25 | GO:0000794: condensed nuclear chromosome | 6.36E-03 |
| 26 | GO:0005876: spindle microtubule | 1.09E-02 |
| 27 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.21E-02 |
| 28 | GO:0009570: chloroplast stroma | 1.26E-02 |
| 29 | GO:0005884: actin filament | 1.34E-02 |
| 30 | GO:0090404: pollen tube tip | 1.34E-02 |
| 31 | GO:0005938: cell cortex | 1.62E-02 |
| 32 | GO:0030095: chloroplast photosystem II | 1.76E-02 |
| 33 | GO:0009507: chloroplast | 1.83E-02 |
| 34 | GO:0005875: microtubule associated complex | 2.06E-02 |
| 35 | GO:0031225: anchored component of membrane | 2.35E-02 |
| 36 | GO:0009654: photosystem II oxygen evolving complex | 2.38E-02 |
| 37 | GO:0009941: chloroplast envelope | 2.50E-02 |
| 38 | GO:0015629: actin cytoskeleton | 2.89E-02 |
| 39 | GO:0019898: extrinsic component of membrane | 4.01E-02 |
| 40 | GO:0000785: chromatin | 4.41E-02 |