GO Enrichment Analysis of Co-expressed Genes with
AT1G16540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018063: cytochrome c-heme linkage | 0.00E+00 |
| 2 | GO:0010407: non-classical arabinogalactan protein metabolic process | 0.00E+00 |
| 3 | GO:0051553: flavone biosynthetic process | 0.00E+00 |
| 4 | GO:0071985: multivesicular body sorting pathway | 0.00E+00 |
| 5 | GO:0010055: atrichoblast differentiation | 0.00E+00 |
| 6 | GO:0006654: phosphatidic acid biosynthetic process | 0.00E+00 |
| 7 | GO:0043620: regulation of DNA-templated transcription in response to stress | 0.00E+00 |
| 8 | GO:0051707: response to other organism | 9.57E-05 |
| 9 | GO:0006623: protein targeting to vacuole | 1.83E-04 |
| 10 | GO:0010230: alternative respiration | 2.13E-04 |
| 11 | GO:0010482: regulation of epidermal cell division | 2.13E-04 |
| 12 | GO:0032107: regulation of response to nutrient levels | 2.13E-04 |
| 13 | GO:0015853: adenine transport | 2.13E-04 |
| 14 | GO:1990641: response to iron ion starvation | 2.13E-04 |
| 15 | GO:0015854: guanine transport | 2.13E-04 |
| 16 | GO:0015031: protein transport | 2.44E-04 |
| 17 | GO:0051607: defense response to virus | 3.08E-04 |
| 18 | GO:0006101: citrate metabolic process | 4.76E-04 |
| 19 | GO:0000719: photoreactive repair | 4.76E-04 |
| 20 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 4.76E-04 |
| 21 | GO:0015709: thiosulfate transport | 4.76E-04 |
| 22 | GO:0071422: succinate transmembrane transport | 4.76E-04 |
| 23 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 4.76E-04 |
| 24 | GO:0019374: galactolipid metabolic process | 4.76E-04 |
| 25 | GO:0000266: mitochondrial fission | 5.07E-04 |
| 26 | GO:0090351: seedling development | 7.24E-04 |
| 27 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 7.74E-04 |
| 28 | GO:0071323: cellular response to chitin | 1.10E-03 |
| 29 | GO:0080024: indolebutyric acid metabolic process | 1.10E-03 |
| 30 | GO:0055070: copper ion homeostasis | 1.10E-03 |
| 31 | GO:0001676: long-chain fatty acid metabolic process | 1.10E-03 |
| 32 | GO:0055089: fatty acid homeostasis | 1.10E-03 |
| 33 | GO:0070301: cellular response to hydrogen peroxide | 1.10E-03 |
| 34 | GO:0015729: oxaloacetate transport | 1.10E-03 |
| 35 | GO:0002239: response to oomycetes | 1.10E-03 |
| 36 | GO:0033356: UDP-L-arabinose metabolic process | 1.47E-03 |
| 37 | GO:0051567: histone H3-K9 methylation | 1.47E-03 |
| 38 | GO:0015867: ATP transport | 1.47E-03 |
| 39 | GO:1901002: positive regulation of response to salt stress | 1.47E-03 |
| 40 | GO:0048830: adventitious root development | 1.47E-03 |
| 41 | GO:1902584: positive regulation of response to water deprivation | 1.47E-03 |
| 42 | GO:0071423: malate transmembrane transport | 1.87E-03 |
| 43 | GO:0006097: glyoxylate cycle | 1.87E-03 |
| 44 | GO:0045927: positive regulation of growth | 1.87E-03 |
| 45 | GO:0042742: defense response to bacterium | 1.94E-03 |
| 46 | GO:0035435: phosphate ion transmembrane transport | 2.31E-03 |
| 47 | GO:0006014: D-ribose metabolic process | 2.31E-03 |
| 48 | GO:0009759: indole glucosinolate biosynthetic process | 2.31E-03 |
| 49 | GO:0015866: ADP transport | 2.31E-03 |
| 50 | GO:0010256: endomembrane system organization | 2.31E-03 |
| 51 | GO:0007275: multicellular organism development | 2.35E-03 |
| 52 | GO:0034389: lipid particle organization | 2.77E-03 |
| 53 | GO:0009816: defense response to bacterium, incompatible interaction | 3.25E-03 |
| 54 | GO:0071669: plant-type cell wall organization or biogenesis | 3.26E-03 |
| 55 | GO:2000014: regulation of endosperm development | 3.26E-03 |
| 56 | GO:0008272: sulfate transport | 3.26E-03 |
| 57 | GO:1900057: positive regulation of leaf senescence | 3.26E-03 |
| 58 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 3.26E-03 |
| 59 | GO:0006333: chromatin assembly or disassembly | 3.26E-03 |
| 60 | GO:0080186: developmental vegetative growth | 3.26E-03 |
| 61 | GO:0040008: regulation of growth | 3.72E-03 |
| 62 | GO:0006605: protein targeting | 3.78E-03 |
| 63 | GO:0045010: actin nucleation | 3.78E-03 |
| 64 | GO:0006102: isocitrate metabolic process | 3.78E-03 |
| 65 | GO:0016559: peroxisome fission | 3.78E-03 |
| 66 | GO:0006644: phospholipid metabolic process | 3.78E-03 |
| 67 | GO:0007155: cell adhesion | 3.78E-03 |
| 68 | GO:0010150: leaf senescence | 3.95E-03 |
| 69 | GO:0017004: cytochrome complex assembly | 4.33E-03 |
| 70 | GO:0006002: fructose 6-phosphate metabolic process | 4.33E-03 |
| 71 | GO:0010112: regulation of systemic acquired resistance | 4.90E-03 |
| 72 | GO:0009056: catabolic process | 4.90E-03 |
| 73 | GO:0000902: cell morphogenesis | 4.90E-03 |
| 74 | GO:0007338: single fertilization | 4.90E-03 |
| 75 | GO:0006099: tricarboxylic acid cycle | 5.30E-03 |
| 76 | GO:0008202: steroid metabolic process | 5.50E-03 |
| 77 | GO:0006839: mitochondrial transport | 5.77E-03 |
| 78 | GO:0006631: fatty acid metabolic process | 6.02E-03 |
| 79 | GO:0006896: Golgi to vacuole transport | 6.12E-03 |
| 80 | GO:0000103: sulfate assimilation | 6.12E-03 |
| 81 | GO:0009641: shade avoidance | 6.12E-03 |
| 82 | GO:0016441: posttranscriptional gene silencing | 6.12E-03 |
| 83 | GO:0010114: response to red light | 6.53E-03 |
| 84 | GO:0009682: induced systemic resistance | 6.77E-03 |
| 85 | GO:0052544: defense response by callose deposition in cell wall | 6.77E-03 |
| 86 | GO:0048765: root hair cell differentiation | 6.77E-03 |
| 87 | GO:0009684: indoleacetic acid biosynthetic process | 6.77E-03 |
| 88 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 7.44E-03 |
| 89 | GO:0007015: actin filament organization | 8.84E-03 |
| 90 | GO:0007033: vacuole organization | 9.58E-03 |
| 91 | GO:0010053: root epidermal cell differentiation | 9.58E-03 |
| 92 | GO:0009225: nucleotide-sugar metabolic process | 9.58E-03 |
| 93 | GO:0016192: vesicle-mediated transport | 9.64E-03 |
| 94 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.03E-02 |
| 95 | GO:0006863: purine nucleobase transport | 1.03E-02 |
| 96 | GO:0000162: tryptophan biosynthetic process | 1.03E-02 |
| 97 | GO:0006289: nucleotide-excision repair | 1.11E-02 |
| 98 | GO:0009620: response to fungus | 1.15E-02 |
| 99 | GO:0010026: trichome differentiation | 1.19E-02 |
| 100 | GO:0051302: regulation of cell division | 1.19E-02 |
| 101 | GO:0006874: cellular calcium ion homeostasis | 1.19E-02 |
| 102 | GO:0006334: nucleosome assembly | 1.27E-02 |
| 103 | GO:0019915: lipid storage | 1.27E-02 |
| 104 | GO:0009269: response to desiccation | 1.27E-02 |
| 105 | GO:0016226: iron-sulfur cluster assembly | 1.36E-02 |
| 106 | GO:0007005: mitochondrion organization | 1.36E-02 |
| 107 | GO:0009411: response to UV | 1.45E-02 |
| 108 | GO:0010584: pollen exine formation | 1.53E-02 |
| 109 | GO:0042147: retrograde transport, endosome to Golgi | 1.62E-02 |
| 110 | GO:0006662: glycerol ether metabolic process | 1.81E-02 |
| 111 | GO:0009960: endosperm development | 1.81E-02 |
| 112 | GO:0019252: starch biosynthetic process | 2.00E-02 |
| 113 | GO:0071554: cell wall organization or biogenesis | 2.10E-02 |
| 114 | GO:0002229: defense response to oomycetes | 2.10E-02 |
| 115 | GO:0010193: response to ozone | 2.10E-02 |
| 116 | GO:0000302: response to reactive oxygen species | 2.10E-02 |
| 117 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.10E-02 |
| 118 | GO:0006635: fatty acid beta-oxidation | 2.10E-02 |
| 119 | GO:0016032: viral process | 2.20E-02 |
| 120 | GO:0009567: double fertilization forming a zygote and endosperm | 2.41E-02 |
| 121 | GO:0009617: response to bacterium | 2.60E-02 |
| 122 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.84E-02 |
| 123 | GO:0009738: abscisic acid-activated signaling pathway | 2.93E-02 |
| 124 | GO:0006906: vesicle fusion | 2.95E-02 |
| 125 | GO:0009627: systemic acquired resistance | 2.95E-02 |
| 126 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.07E-02 |
| 127 | GO:0009817: defense response to fungus, incompatible interaction | 3.30E-02 |
| 128 | GO:0030244: cellulose biosynthetic process | 3.30E-02 |
| 129 | GO:0009832: plant-type cell wall biogenesis | 3.42E-02 |
| 130 | GO:0048767: root hair elongation | 3.42E-02 |
| 131 | GO:0009813: flavonoid biosynthetic process | 3.42E-02 |
| 132 | GO:0006499: N-terminal protein myristoylation | 3.54E-02 |
| 133 | GO:0048527: lateral root development | 3.66E-02 |
| 134 | GO:0010043: response to zinc ion | 3.66E-02 |
| 135 | GO:0000724: double-strand break repair via homologous recombination | 3.78E-02 |
| 136 | GO:0045087: innate immune response | 3.91E-02 |
| 137 | GO:0034599: cellular response to oxidative stress | 4.03E-02 |
| 138 | GO:0006887: exocytosis | 4.41E-02 |
| 139 | GO:0000209: protein polyubiquitination | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061133: endopeptidase activator activity | 0.00E+00 |
| 2 | GO:0034338: short-chain carboxylesterase activity | 0.00E+00 |
| 3 | GO:0033759: flavone synthase activity | 0.00E+00 |
| 4 | GO:0004610: phosphoacetylglucosamine mutase activity | 0.00E+00 |
| 5 | GO:0032266: phosphatidylinositol-3-phosphate binding | 2.13E-04 |
| 6 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 2.13E-04 |
| 7 | GO:0052691: UDP-arabinopyranose mutase activity | 4.76E-04 |
| 8 | GO:0050736: O-malonyltransferase activity | 4.76E-04 |
| 9 | GO:0015117: thiosulfate transmembrane transporter activity | 4.76E-04 |
| 10 | GO:0048531: beta-1,3-galactosyltransferase activity | 4.76E-04 |
| 11 | GO:1901677: phosphate transmembrane transporter activity | 4.76E-04 |
| 12 | GO:0003994: aconitate hydratase activity | 4.76E-04 |
| 13 | GO:0032934: sterol binding | 4.76E-04 |
| 14 | GO:0015141: succinate transmembrane transporter activity | 7.74E-04 |
| 15 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 7.74E-04 |
| 16 | GO:0043130: ubiquitin binding | 8.90E-04 |
| 17 | GO:0015131: oxaloacetate transmembrane transporter activity | 1.10E-03 |
| 18 | GO:0035529: NADH pyrophosphatase activity | 1.10E-03 |
| 19 | GO:0030527: structural constituent of chromatin | 1.10E-03 |
| 20 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 1.10E-03 |
| 21 | GO:0017077: oxidative phosphorylation uncoupler activity | 1.10E-03 |
| 22 | GO:0016866: intramolecular transferase activity | 1.47E-03 |
| 23 | GO:0070628: proteasome binding | 1.47E-03 |
| 24 | GO:0050378: UDP-glucuronate 4-epimerase activity | 1.47E-03 |
| 25 | GO:0050662: coenzyme binding | 1.86E-03 |
| 26 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.87E-03 |
| 27 | GO:0004623: phospholipase A2 activity | 1.87E-03 |
| 28 | GO:0047631: ADP-ribose diphosphatase activity | 1.87E-03 |
| 29 | GO:0000210: NAD+ diphosphatase activity | 2.31E-03 |
| 30 | GO:0102391: decanoate--CoA ligase activity | 2.77E-03 |
| 31 | GO:0004747: ribokinase activity | 2.77E-03 |
| 32 | GO:0005347: ATP transmembrane transporter activity | 2.77E-03 |
| 33 | GO:0015217: ADP transmembrane transporter activity | 2.77E-03 |
| 34 | GO:0003872: 6-phosphofructokinase activity | 3.26E-03 |
| 35 | GO:0015140: malate transmembrane transporter activity | 3.26E-03 |
| 36 | GO:0008320: protein transmembrane transporter activity | 3.26E-03 |
| 37 | GO:0004620: phospholipase activity | 3.26E-03 |
| 38 | GO:0004467: long-chain fatty acid-CoA ligase activity | 3.26E-03 |
| 39 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 3.78E-03 |
| 40 | GO:0008865: fructokinase activity | 3.78E-03 |
| 41 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.78E-03 |
| 42 | GO:0008142: oxysterol binding | 4.33E-03 |
| 43 | GO:0047617: acyl-CoA hydrolase activity | 5.50E-03 |
| 44 | GO:0051539: 4 iron, 4 sulfur cluster binding | 5.77E-03 |
| 45 | GO:0030234: enzyme regulator activity | 6.12E-03 |
| 46 | GO:0005198: structural molecule activity | 7.34E-03 |
| 47 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 7.44E-03 |
| 48 | GO:0015116: sulfate transmembrane transporter activity | 7.44E-03 |
| 49 | GO:0008378: galactosyltransferase activity | 7.44E-03 |
| 50 | GO:0004022: alcohol dehydrogenase (NAD) activity | 8.13E-03 |
| 51 | GO:0005217: intracellular ligand-gated ion channel activity | 9.58E-03 |
| 52 | GO:0008061: chitin binding | 9.58E-03 |
| 53 | GO:0003712: transcription cofactor activity | 9.58E-03 |
| 54 | GO:0004970: ionotropic glutamate receptor activity | 9.58E-03 |
| 55 | GO:0001046: core promoter sequence-specific DNA binding | 1.11E-02 |
| 56 | GO:0051536: iron-sulfur cluster binding | 1.11E-02 |
| 57 | GO:0022857: transmembrane transporter activity | 1.18E-02 |
| 58 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.19E-02 |
| 59 | GO:0015035: protein disulfide oxidoreductase activity | 1.29E-02 |
| 60 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.45E-02 |
| 61 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 1.53E-02 |
| 62 | GO:0047134: protein-disulfide reductase activity | 1.62E-02 |
| 63 | GO:0005102: receptor binding | 1.62E-02 |
| 64 | GO:0004791: thioredoxin-disulfide reductase activity | 1.91E-02 |
| 65 | GO:0015297: antiporter activity | 2.08E-02 |
| 66 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.31E-02 |
| 67 | GO:0016413: O-acetyltransferase activity | 2.62E-02 |
| 68 | GO:0004806: triglyceride lipase activity | 3.07E-02 |
| 69 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.30E-02 |
| 70 | GO:0003682: chromatin binding | 3.56E-02 |
| 71 | GO:0050660: flavin adenine dinucleotide binding | 3.89E-02 |
| 72 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.91E-02 |
| 73 | GO:0003746: translation elongation factor activity | 3.91E-02 |
| 74 | GO:0000149: SNARE binding | 4.16E-02 |
| 75 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 4.16E-02 |
| 76 | GO:0004497: monooxygenase activity | 4.17E-02 |
| 77 | GO:0042393: histone binding | 4.29E-02 |
| 78 | GO:0050661: NADP binding | 4.29E-02 |
| 79 | GO:0020037: heme binding | 4.48E-02 |
| 80 | GO:0005484: SNAP receptor activity | 4.68E-02 |
| 81 | GO:0019825: oxygen binding | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005789: endoplasmic reticulum membrane | 2.70E-06 |
| 2 | GO:0016021: integral component of membrane | 1.07E-05 |
| 3 | GO:0005829: cytosol | 4.20E-05 |
| 4 | GO:0005794: Golgi apparatus | 1.91E-04 |
| 5 | GO:0045252: oxoglutarate dehydrogenase complex | 2.13E-04 |
| 6 | GO:0000138: Golgi trans cisterna | 2.13E-04 |
| 7 | GO:0017119: Golgi transport complex | 3.82E-04 |
| 8 | GO:0000814: ESCRT II complex | 4.76E-04 |
| 9 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 7.74E-04 |
| 10 | GO:0030658: transport vesicle membrane | 1.10E-03 |
| 11 | GO:0005945: 6-phosphofructokinase complex | 1.87E-03 |
| 12 | GO:0032580: Golgi cisterna membrane | 2.58E-03 |
| 13 | GO:0005885: Arp2/3 protein complex | 2.77E-03 |
| 14 | GO:0005743: mitochondrial inner membrane | 2.99E-03 |
| 15 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 3.26E-03 |
| 16 | GO:0000139: Golgi membrane | 3.53E-03 |
| 17 | GO:0005811: lipid particle | 4.33E-03 |
| 18 | GO:0005779: integral component of peroxisomal membrane | 4.33E-03 |
| 19 | GO:0030665: clathrin-coated vesicle membrane | 5.50E-03 |
| 20 | GO:0008540: proteasome regulatory particle, base subcomplex | 5.50E-03 |
| 21 | GO:0005783: endoplasmic reticulum | 5.85E-03 |
| 22 | GO:0031902: late endosome membrane | 6.02E-03 |
| 23 | GO:0008541: proteasome regulatory particle, lid subcomplex | 6.77E-03 |
| 24 | GO:0005795: Golgi stack | 9.58E-03 |
| 25 | GO:0005769: early endosome | 1.03E-02 |
| 26 | GO:0005741: mitochondrial outer membrane | 1.27E-02 |
| 27 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.53E-02 |
| 28 | GO:0031225: anchored component of membrane | 1.56E-02 |
| 29 | GO:0030136: clathrin-coated vesicle | 1.62E-02 |
| 30 | GO:0005770: late endosome | 1.81E-02 |
| 31 | GO:0031965: nuclear membrane | 2.00E-02 |
| 32 | GO:0019898: extrinsic component of membrane | 2.00E-02 |
| 33 | GO:0000785: chromatin | 2.20E-02 |
| 34 | GO:0005886: plasma membrane | 2.20E-02 |
| 35 | GO:0005778: peroxisomal membrane | 2.52E-02 |
| 36 | GO:0009506: plasmodesma | 2.79E-02 |
| 37 | GO:0046658: anchored component of plasma membrane | 2.88E-02 |
| 38 | GO:0005777: peroxisome | 3.62E-02 |
| 39 | GO:0031201: SNARE complex | 4.41E-02 |