co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G16500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0016102: diterpenoid biosynthetic process	0.00E+00
4	GO:0072722: response to amitrole	0.00E+00
5	GO:0006216: cytidine catabolic process	0.00E+00
6	GO:0046680: response to DDT	0.00E+00
7	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
8	GO:0000032: cell wall mannoprotein biosynthetic process	9.69E-05
9	GO:0042964: thioredoxin reduction	9.69E-05
10	GO:0046939: nucleotide phosphorylation	2.28E-04
11	GO:0080026: response to indolebutyric acid	2.28E-04
12	GO:0009062: fatty acid catabolic process	3.80E-04
13	GO:0006517: protein deglycosylation	3.80E-04
14	GO:0010272: response to silver ion	3.80E-04
15	GO:0033591: response to L-ascorbic acid	3.80E-04
16	GO:0006556: S-adenosylmethionine biosynthetic process	3.80E-04
17	GO:0046686: response to cadmium ion	5.20E-04
18	GO:0080024: indolebutyric acid metabolic process	5.46E-04
19	GO:0000187: activation of MAPK activity	5.46E-04
20	GO:0009298: GDP-mannose biosynthetic process	5.46E-04
21	GO:0009751: response to salicylic acid	6.22E-04
22	GO:0010188: response to microbial phytotoxin	7.26E-04
23	GO:0000304: response to singlet oxygen	9.17E-04
24	GO:0098719: sodium ion import across plasma membrane	9.17E-04
25	GO:0006564: L-serine biosynthetic process	9.17E-04
26	GO:0009615: response to virus	1.06E-03
27	GO:0060918: auxin transport	1.12E-03
28	GO:0009972: cytidine deamination	1.12E-03
29	GO:0006555: methionine metabolic process	1.12E-03
30	GO:0009627: systemic acquired resistance	1.18E-03
31	GO:0009617: response to bacterium	1.24E-03
32	GO:0009082: branched-chain amino acid biosynthetic process	1.34E-03
33	GO:0009099: valine biosynthetic process	1.34E-03
34	GO:0080113: regulation of seed growth	1.34E-03
35	GO:0019509: L-methionine salvage from methylthioadenosine	1.34E-03
36	GO:0080027: response to herbivore	1.57E-03
37	GO:0071669: plant-type cell wall organization or biogenesis	1.57E-03
38	GO:0050829: defense response to Gram-negative bacterium	1.57E-03
39	GO:0006099: tricarboxylic acid cycle	1.80E-03
40	GO:0006102: isocitrate metabolic process	1.81E-03
41	GO:0006491: N-glycan processing	1.81E-03
42	GO:0019430: removal of superoxide radicals	2.07E-03
43	GO:0010120: camalexin biosynthetic process	2.07E-03
44	GO:0009097: isoleucine biosynthetic process	2.07E-03
45	GO:0006002: fructose 6-phosphate metabolic process	2.07E-03
46	GO:0009657: plastid organization	2.07E-03
47	GO:0009821: alkaloid biosynthetic process	2.33E-03
48	GO:0006754: ATP biosynthetic process	2.33E-03
49	GO:0051453: regulation of intracellular pH	2.61E-03
50	GO:0009098: leucine biosynthetic process	2.61E-03
51	GO:0031347: regulation of defense response	2.67E-03
52	GO:0045454: cell redox homeostasis	2.82E-03
53	GO:0006032: chitin catabolic process	2.90E-03
54	GO:0009688: abscisic acid biosynthetic process	2.90E-03
55	GO:0043069: negative regulation of programmed cell death	2.90E-03
56	GO:0000272: polysaccharide catabolic process	3.20E-03
57	GO:0009682: induced systemic resistance	3.20E-03
58	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.50E-03
59	GO:0006096: glycolytic process	3.50E-03
60	GO:0006790: sulfur compound metabolic process	3.50E-03
61	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	3.82E-03
62	GO:0010102: lateral root morphogenesis	3.82E-03
63	GO:0006807: nitrogen compound metabolic process	3.82E-03
64	GO:0009620: response to fungus	3.84E-03
65	GO:0009266: response to temperature stimulus	4.15E-03
66	GO:0019853: L-ascorbic acid biosynthetic process	4.49E-03
67	GO:0046854: phosphatidylinositol phosphorylation	4.49E-03
68	GO:0010053: root epidermal cell differentiation	4.49E-03
69	GO:0034976: response to endoplasmic reticulum stress	4.83E-03
70	GO:0009058: biosynthetic process	5.53E-03
71	GO:0016998: cell wall macromolecule catabolic process	5.93E-03
72	GO:0009814: defense response, incompatible interaction	6.31E-03
73	GO:0030433: ubiquitin-dependent ERAD pathway	6.31E-03
74	GO:0006730: one-carbon metabolic process	6.31E-03
75	GO:0010227: floral organ abscission	6.70E-03
76	GO:0009693: ethylene biosynthetic process	6.70E-03
77	GO:0045490: pectin catabolic process	7.24E-03
78	GO:0016117: carotenoid biosynthetic process	7.51E-03
79	GO:0010051: xylem and phloem pattern formation	7.93E-03
80	GO:0015991: ATP hydrolysis coupled proton transport	7.93E-03
81	GO:0006662: glycerol ether metabolic process	8.35E-03
82	GO:0045489: pectin biosynthetic process	8.35E-03
83	GO:0048544: recognition of pollen	8.79E-03
84	GO:0006814: sodium ion transport	8.79E-03
85	GO:0009646: response to absence of light	8.79E-03
86	GO:0009851: auxin biosynthetic process	9.23E-03
87	GO:0006623: protein targeting to vacuole	9.23E-03
88	GO:0006635: fatty acid beta-oxidation	9.68E-03
89	GO:0010193: response to ozone	9.68E-03
90	GO:0030163: protein catabolic process	1.06E-02
91	GO:0071281: cellular response to iron ion	1.06E-02
92	GO:0006464: cellular protein modification process	1.11E-02
93	GO:0019760: glucosinolate metabolic process	1.11E-02
94	GO:0071805: potassium ion transmembrane transport	1.16E-02
95	GO:0055114: oxidation-reduction process	1.40E-02
96	GO:0006888: ER to Golgi vesicle-mediated transport	1.41E-02
97	GO:0016049: cell growth	1.46E-02
98	GO:0048767: root hair elongation	1.57E-02
99	GO:0009407: toxin catabolic process	1.62E-02
100	GO:0010043: response to zinc ion	1.68E-02
101	GO:0007568: aging	1.68E-02
102	GO:0009631: cold acclimation	1.68E-02
103	GO:0045087: innate immune response	1.79E-02
104	GO:0034599: cellular response to oxidative stress	1.85E-02
105	GO:0042742: defense response to bacterium	1.86E-02
106	GO:0042542: response to hydrogen peroxide	2.08E-02
107	GO:0009744: response to sucrose	2.14E-02
108	GO:0051707: response to other organism	2.14E-02
109	GO:0000209: protein polyubiquitination	2.20E-02
110	GO:0009753: response to jasmonic acid	2.21E-02
111	GO:0050832: defense response to fungus	2.26E-02
112	GO:0009644: response to high light intensity	2.27E-02
113	GO:0009636: response to toxic substance	2.33E-02
114	GO:0000165: MAPK cascade	2.46E-02
115	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.46E-02
116	GO:0009664: plant-type cell wall organization	2.52E-02
117	GO:0009846: pollen germination	2.52E-02
118	GO:0006486: protein glycosylation	2.65E-02
119	GO:0006417: regulation of translation	2.85E-02
120	GO:0048316: seed development	3.05E-02
121	GO:0009626: plant-type hypersensitive response	3.12E-02
122	GO:0042545: cell wall modification	3.33E-02
123	GO:0009611: response to wounding	3.73E-02
124	GO:0007165: signal transduction	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0070577: lysine-acetylated histone binding	0.00E+00
4	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
5	GO:0080013: (E,E)-geranyllinalool synthase activity	0.00E+00
6	GO:0047844: deoxycytidine deaminase activity	0.00E+00
7	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	9.69E-05
8	GO:0048037: cofactor binding	9.69E-05
9	GO:0004476: mannose-6-phosphate isomerase activity	9.69E-05
10	GO:1990585: hydroxyproline O-arabinosyltransferase activity	2.28E-04
11	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.28E-04
12	GO:0010297: heteropolysaccharide binding	2.28E-04
13	GO:0004617: phosphoglycerate dehydrogenase activity	2.28E-04
14	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.28E-04
15	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	3.80E-04
16	GO:0004478: methionine adenosyltransferase activity	3.80E-04
17	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	3.80E-04
18	GO:0052656: L-isoleucine transaminase activity	5.46E-04
19	GO:0004165: dodecenoyl-CoA delta-isomerase activity	5.46E-04
20	GO:0052654: L-leucine transaminase activity	5.46E-04
21	GO:0052655: L-valine transaminase activity	5.46E-04
22	GO:0019201: nucleotide kinase activity	5.46E-04
23	GO:0004449: isocitrate dehydrogenase (NAD+) activity	5.46E-04
24	GO:0004791: thioredoxin-disulfide reductase activity	6.54E-04
25	GO:0070628: proteasome binding	7.26E-04
26	GO:0004031: aldehyde oxidase activity	7.26E-04
27	GO:0050302: indole-3-acetaldehyde oxidase activity	7.26E-04
28	GO:0009916: alternative oxidase activity	7.26E-04
29	GO:0004084: branched-chain-amino-acid transaminase activity	7.26E-04
30	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.12E-03
31	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.12E-03
32	GO:0035252: UDP-xylosyltransferase activity	1.12E-03
33	GO:0004017: adenylate kinase activity	1.34E-03
34	GO:0004126: cytidine deaminase activity	1.34E-03
35	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.34E-03
36	GO:0003872: 6-phosphofructokinase activity	1.57E-03
37	GO:0000287: magnesium ion binding	1.67E-03
38	GO:0004708: MAP kinase kinase activity	1.81E-03
39	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.81E-03
40	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	2.33E-03
41	GO:0030955: potassium ion binding	2.61E-03
42	GO:0016844: strictosidine synthase activity	2.61E-03
43	GO:0004743: pyruvate kinase activity	2.61E-03
44	GO:0004568: chitinase activity	2.90E-03
45	GO:0015386: potassium:proton antiporter activity	3.20E-03
46	GO:0031625: ubiquitin protein ligase binding	3.28E-03
47	GO:0031624: ubiquitin conjugating enzyme binding	4.15E-03
48	GO:0008061: chitin binding	4.49E-03
49	GO:0004190: aspartic-type endopeptidase activity	4.49E-03
50	GO:0010333: terpene synthase activity	5.93E-03
51	GO:0003756: protein disulfide isomerase activity	7.10E-03
52	GO:0047134: protein-disulfide reductase activity	7.51E-03
53	GO:0005199: structural constituent of cell wall	8.35E-03
54	GO:0001085: RNA polymerase II transcription factor binding	8.35E-03
55	GO:0008270: zinc ion binding	8.76E-03
56	GO:0004518: nuclease activity	1.01E-02
57	GO:0015385: sodium:proton antiporter activity	1.06E-02
58	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.06E-02
59	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.16E-02
60	GO:0016597: amino acid binding	1.20E-02
61	GO:0050660: flavin adenine dinucleotide binding	1.30E-02
62	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.41E-02
63	GO:0061630: ubiquitin protein ligase activity	1.47E-02
64	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.68E-02
65	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.68E-02
66	GO:0003993: acid phosphatase activity	1.85E-02
67	GO:0005524: ATP binding	1.94E-02
68	GO:0004364: glutathione transferase activity	2.08E-02
69	GO:0003824: catalytic activity	2.10E-02
70	GO:0016301: kinase activity	2.12E-02
71	GO:0046872: metal ion binding	2.16E-02
72	GO:0009055: electron carrier activity	2.21E-02
73	GO:0051537: 2 iron, 2 sulfur cluster binding	2.27E-02
74	GO:0005198: structural molecule activity	2.33E-02
75	GO:0051287: NAD binding	2.46E-02
76	GO:0045330: aspartyl esterase activity	2.85E-02
77	GO:0016887: ATPase activity	3.19E-02
78	GO:0030599: pectinesterase activity	3.26E-02
79	GO:0015035: protein disulfide oxidoreductase activity	3.48E-02
80	GO:0004386: helicase activity	3.62E-02
81	GO:0000166: nucleotide binding	3.65E-02
82	GO:0030170: pyridoxal phosphate binding	4.30E-02
83	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.38E-02
84	GO:0008565: protein transporter activity	4.54E-02
85	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.78E-02
86	GO:0046910: pectinesterase inhibitor activity	4.78E-02
87	GO:0030246: carbohydrate binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0046862: chromoplast membrane	0.00E+00
2	GO:0009530: primary cell wall	3.80E-04
3	GO:0005945: 6-phosphofructokinase complex	9.17E-04
4	GO:0030127: COPII vesicle coat	1.12E-03
5	GO:0005829: cytosol	1.32E-03
6	GO:0031982: vesicle	1.81E-03
7	GO:0030665: clathrin-coated vesicle membrane	2.61E-03
8	GO:0017119: Golgi transport complex	2.90E-03
9	GO:0005886: plasma membrane	2.99E-03
10	GO:0005794: Golgi apparatus	3.68E-03
11	GO:0005768: endosome	3.73E-03
12	GO:0005737: cytoplasm	4.88E-03
13	GO:0070469: respiratory chain	5.55E-03
14	GO:0005839: proteasome core complex	5.93E-03
15	GO:0005783: endoplasmic reticulum	9.92E-03
16	GO:0016592: mediator complex	1.01E-02
17	GO:0071944: cell periphery	1.06E-02
18	GO:0032580: Golgi cisterna membrane	1.11E-02
19	GO:0005788: endoplasmic reticulum lumen	1.30E-02
20	GO:0005667: transcription factor complex	1.36E-02
21	GO:0005802: trans-Golgi network	1.39E-02
22	GO:0000151: ubiquitin ligase complex	1.51E-02
23	GO:0016021: integral component of membrane	1.75E-02
24	GO:0031902: late endosome membrane	2.02E-02
25	GO:0009505: plant-type cell wall	2.47E-02
26	GO:0000139: Golgi membrane	2.73E-02
27	GO:0005774: vacuolar membrane	2.83E-02
28	GO:0010008: endosome membrane	3.05E-02
29	GO:0005618: cell wall	3.45E-02
30	GO:0005759: mitochondrial matrix	4.70E-02