co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G15390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032928: regulation of superoxide anion generation	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0019478: D-amino acid catabolic process	6.74E-05
4	GO:0031648: protein destabilization	1.62E-04
5	GO:0016122: xanthophyll metabolic process	1.62E-04
6	GO:0045910: negative regulation of DNA recombination	2.75E-04
7	GO:0034090: maintenance of meiotic sister chromatid cohesion	2.75E-04
8	GO:0010239: chloroplast mRNA processing	3.98E-04
9	GO:0010117: photoprotection	6.73E-04
10	GO:0009107: lipoate biosynthetic process	6.73E-04
11	GO:0009696: salicylic acid metabolic process	6.73E-04
12	GO:0009658: chloroplast organization	9.40E-04
13	GO:0009231: riboflavin biosynthetic process	1.32E-03
14	GO:0042255: ribosome assembly	1.32E-03
15	GO:0006353: DNA-templated transcription, termination	1.32E-03
16	GO:0019430: removal of superoxide radicals	1.50E-03
17	GO:0071482: cellular response to light stimulus	1.50E-03
18	GO:0009657: plastid organization	1.50E-03
19	GO:0051865: protein autoubiquitination	1.69E-03
20	GO:0000373: Group II intron splicing	1.69E-03
21	GO:0009688: abscisic acid biosynthetic process	2.10E-03
22	GO:0006298: mismatch repair	2.10E-03
23	GO:0009691: cytokinin biosynthetic process	2.76E-03
24	GO:0006302: double-strand break repair	2.99E-03
25	GO:0010020: chloroplast fission	2.99E-03
26	GO:0051321: meiotic cell cycle	4.26E-03
27	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.53E-03
28	GO:0009686: gibberellin biosynthetic process	4.81E-03
29	GO:0016117: carotenoid biosynthetic process	5.38E-03
30	GO:0008033: tRNA processing	5.68E-03
31	GO:0009958: positive gravitropism	5.98E-03
32	GO:0071554: cell wall organization or biogenesis	6.91E-03
33	GO:1901657: glycosyl compound metabolic process	7.57E-03
34	GO:0009639: response to red or far red light	7.90E-03
35	GO:0006464: cellular protein modification process	7.90E-03
36	GO:0000910: cytokinesis	8.59E-03
37	GO:0016126: sterol biosynthetic process	8.93E-03
38	GO:0009627: systemic acquired resistance	9.65E-03
39	GO:0009817: defense response to fungus, incompatible interaction	1.08E-02
40	GO:0006811: ion transport	1.15E-02
41	GO:0006865: amino acid transport	1.23E-02
42	GO:0009867: jasmonic acid mediated signaling pathway	1.27E-02
43	GO:0010114: response to red light	1.52E-02
44	GO:0042546: cell wall biogenesis	1.57E-02
45	GO:0009965: leaf morphogenesis	1.65E-02
46	GO:0048367: shoot system development	2.17E-02
47	GO:0009740: gibberellic acid mediated signaling pathway	2.31E-02
48	GO:0040008: regulation of growth	3.45E-02
49	GO:0009451: RNA modification	3.63E-02
50	GO:0009739: response to gibberellin	3.86E-02
51	GO:0008380: RNA splicing	4.04E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
3	GO:0052381: tRNA dimethylallyltransferase activity	6.74E-05
4	GO:0017118: lipoyltransferase activity	1.62E-04
5	GO:0016415: octanoyltransferase activity	1.62E-04
6	GO:0016707: gibberellin 3-beta-dioxygenase activity	2.75E-04
7	GO:0080031: methyl salicylate esterase activity	3.98E-04
8	GO:0030983: mismatched DNA binding	8.23E-04
9	GO:0080030: methyl indole-3-acetate esterase activity	8.23E-04
10	GO:0004784: superoxide dismutase activity	8.23E-04
11	GO:0043621: protein self-association	1.49E-03
12	GO:0003690: double-stranded DNA binding	1.91E-03
13	GO:0003924: GTPase activity	1.99E-03
14	GO:0004519: endonuclease activity	2.22E-03
15	GO:0008061: chitin binding	3.23E-03
16	GO:0008134: transcription factor binding	3.73E-03
17	GO:0051087: chaperone binding	3.99E-03
18	GO:0003964: RNA-directed DNA polymerase activity	4.26E-03
19	GO:0008408: 3'-5' exonuclease activity	4.26E-03
20	GO:0003727: single-stranded RNA binding	5.09E-03
21	GO:0016787: hydrolase activity	6.63E-03
22	GO:0016788: hydrolase activity, acting on ester bonds	7.04E-03
23	GO:0004518: nuclease activity	7.24E-03
24	GO:0003684: damaged DNA binding	7.90E-03
25	GO:0016413: O-acetyltransferase activity	8.59E-03
26	GO:0102483: scopolin beta-glucosidase activity	1.00E-02
27	GO:0030145: manganese ion binding	1.19E-02
28	GO:0008422: beta-glucosidase activity	1.35E-02
29	GO:0016887: ATPase activity	1.97E-02
30	GO:0015171: amino acid transmembrane transporter activity	2.02E-02
31	GO:0004386: helicase activity	2.57E-02
32	GO:0016740: transferase activity	2.75E-02
33	GO:0019843: rRNA binding	2.84E-02
34	GO:0005516: calmodulin binding	3.39E-02
35	GO:0005525: GTP binding	3.71E-02

Rank	GO Term	Adjusted P value
1	GO:0009537: proplastid	0.00E+00
2	GO:0009349: riboflavin synthase complex	0.00E+00
3	GO:0035452: extrinsic component of plastid membrane	0.00E+00
4	GO:0000791: euchromatin	6.74E-05
5	GO:0009513: etioplast	1.62E-04
6	GO:0030870: Mre11 complex	1.62E-04
7	GO:0009509: chromoplast	2.75E-04
8	GO:0042646: plastid nucleoid	3.98E-04
9	GO:0009517: PSII associated light-harvesting complex II	5.32E-04
10	GO:0000795: synaptonemal complex	6.73E-04
11	GO:0009501: amyloplast	1.32E-03
12	GO:0046930: pore complex	1.50E-03
13	GO:0042644: chloroplast nucleoid	1.69E-03
14	GO:0009504: cell plate	6.60E-03
15	GO:0016592: mediator complex	7.24E-03
16	GO:0000785: chromatin	7.24E-03
17	GO:0009295: nucleoid	8.24E-03
18	GO:0009707: chloroplast outer membrane	1.08E-02
19	GO:0009507: chloroplast	1.14E-02
20	GO:0009941: chloroplast envelope	2.16E-02
21	GO:0010008: endosome membrane	2.17E-02
22	GO:0005759: mitochondrial matrix	3.33E-02
23	GO:0009570: chloroplast stroma	3.53E-02