co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G15260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0006114: glycerol biosynthetic process	0.00E+00
3	GO:0046460: neutral lipid biosynthetic process	0.00E+00
4	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
5	GO:0000372: Group I intron splicing	0.00E+00
6	GO:0043972: histone H3-K23 acetylation	0.00E+00
7	GO:0044154: histone H3-K14 acetylation	0.00E+00
8	GO:0010158: abaxial cell fate specification	1.46E-04
9	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	3.97E-04
10	GO:0043971: histone H3-K18 acetylation	3.97E-04
11	GO:0048657: anther wall tapetum cell differentiation	3.97E-04
12	GO:0042547: cell wall modification involved in multidimensional cell growth	3.97E-04
13	GO:0043087: regulation of GTPase activity	3.97E-04
14	GO:0006436: tryptophanyl-tRNA aminoacylation	3.97E-04
15	GO:0000066: mitochondrial ornithine transport	3.97E-04
16	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	3.97E-04
17	GO:0051171: regulation of nitrogen compound metabolic process	3.97E-04
18	GO:0007389: pattern specification process	5.59E-04
19	GO:0000373: Group II intron splicing	6.69E-04
20	GO:0006435: threonyl-tRNA aminoacylation	8.60E-04
21	GO:0080005: photosystem stoichiometry adjustment	8.60E-04
22	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	8.60E-04
23	GO:0001736: establishment of planar polarity	8.60E-04
24	GO:0010275: NAD(P)H dehydrogenase complex assembly	8.60E-04
25	GO:0006094: gluconeogenesis	1.37E-03
26	GO:0006013: mannose metabolic process	1.40E-03
27	GO:0009793: embryo development ending in seed dormancy	1.40E-03
28	GO:0001578: microtubule bundle formation	1.40E-03
29	GO:0045493: xylan catabolic process	1.40E-03
30	GO:0009800: cinnamic acid biosynthetic process	2.02E-03
31	GO:0010306: rhamnogalacturonan II biosynthetic process	2.02E-03
32	GO:0010255: glucose mediated signaling pathway	2.02E-03
33	GO:0051639: actin filament network formation	2.02E-03
34	GO:0006552: leucine catabolic process	2.71E-03
35	GO:0007020: microtubule nucleation	2.71E-03
36	GO:0015846: polyamine transport	2.71E-03
37	GO:0051781: positive regulation of cell division	2.71E-03
38	GO:0051764: actin crosslink formation	2.71E-03
39	GO:0051322: anaphase	2.71E-03
40	GO:0009926: auxin polar transport	2.73E-03
41	GO:0006508: proteolysis	3.06E-03
42	GO:0046785: microtubule polymerization	3.47E-03
43	GO:0010236: plastoquinone biosynthetic process	3.47E-03
44	GO:0031365: N-terminal protein amino acid modification	3.47E-03
45	GO:1902183: regulation of shoot apical meristem development	3.47E-03
46	GO:0006465: signal peptide processing	3.47E-03
47	GO:0048868: pollen tube development	4.26E-03
48	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.29E-03
49	GO:0006559: L-phenylalanine catabolic process	4.29E-03
50	GO:0048827: phyllome development	4.29E-03
51	GO:0034389: lipid particle organization	5.17E-03
52	GO:0009942: longitudinal axis specification	5.17E-03
53	GO:0007264: small GTPase mediated signal transduction	5.62E-03
54	GO:0010050: vegetative phase change	6.11E-03
55	GO:0022904: respiratory electron transport chain	6.11E-03
56	GO:0009610: response to symbiotic fungus	6.11E-03
57	GO:0048528: post-embryonic root development	6.11E-03
58	GO:0010252: auxin homeostasis	6.38E-03
59	GO:0006353: DNA-templated transcription, termination	7.10E-03
60	GO:0070413: trehalose metabolism in response to stress	7.10E-03
61	GO:0009850: auxin metabolic process	7.10E-03
62	GO:0009704: de-etiolation	7.10E-03
63	GO:0048564: photosystem I assembly	7.10E-03
64	GO:0009911: positive regulation of flower development	7.61E-03
65	GO:0009827: plant-type cell wall modification	8.15E-03
66	GO:0009657: plastid organization	8.15E-03
67	GO:0044030: regulation of DNA methylation	8.15E-03
68	GO:0022900: electron transport chain	8.15E-03
69	GO:0010411: xyloglucan metabolic process	8.98E-03
70	GO:0006098: pentose-phosphate shunt	9.25E-03
71	GO:0019432: triglyceride biosynthetic process	9.25E-03
72	GO:0090305: nucleic acid phosphodiester bond hydrolysis	9.25E-03
73	GO:2000024: regulation of leaf development	9.25E-03
74	GO:0010380: regulation of chlorophyll biosynthetic process	1.04E-02
75	GO:0008202: steroid metabolic process	1.04E-02
76	GO:0019538: protein metabolic process	1.16E-02
77	GO:0006535: cysteine biosynthetic process from serine	1.16E-02
78	GO:0048829: root cap development	1.16E-02
79	GO:0006259: DNA metabolic process	1.16E-02
80	GO:0045490: pectin catabolic process	1.26E-02
81	GO:0006415: translational termination	1.29E-02
82	GO:0006265: DNA topological change	1.29E-02
83	GO:0009750: response to fructose	1.29E-02
84	GO:0048765: root hair cell differentiation	1.29E-02
85	GO:0009451: RNA modification	1.30E-02
86	GO:0045037: protein import into chloroplast stroma	1.42E-02
87	GO:0010582: floral meristem determinacy	1.42E-02
88	GO:0010229: inflorescence development	1.55E-02
89	GO:0009767: photosynthetic electron transport chain	1.55E-02
90	GO:0010020: chloroplast fission	1.69E-02
91	GO:0010207: photosystem II assembly	1.69E-02
92	GO:0010540: basipetal auxin transport	1.69E-02
93	GO:0080188: RNA-directed DNA methylation	1.83E-02
94	GO:0090351: seedling development	1.83E-02
95	GO:0006863: purine nucleobase transport	1.98E-02
96	GO:0006071: glycerol metabolic process	1.98E-02
97	GO:0009944: polarity specification of adaxial/abaxial axis	2.13E-02
98	GO:0010187: negative regulation of seed germination	2.13E-02
99	GO:0051017: actin filament bundle assembly	2.13E-02
100	GO:0006289: nucleotide-excision repair	2.13E-02
101	GO:0005992: trehalose biosynthetic process	2.13E-02
102	GO:0019344: cysteine biosynthetic process	2.13E-02
103	GO:0009734: auxin-activated signaling pathway	2.24E-02
104	GO:0006418: tRNA aminoacylation for protein translation	2.29E-02
105	GO:0051603: proteolysis involved in cellular protein catabolic process	2.29E-02
106	GO:0043622: cortical microtubule organization	2.29E-02
107	GO:0010073: meristem maintenance	2.29E-02
108	GO:0006825: copper ion transport	2.29E-02
109	GO:0003333: amino acid transmembrane transport	2.44E-02
110	GO:0015992: proton transport	2.44E-02
111	GO:0048511: rhythmic process	2.44E-02
112	GO:0006417: regulation of translation	2.45E-02
113	GO:0009814: defense response, incompatible interaction	2.61E-02
114	GO:0035428: hexose transmembrane transport	2.61E-02
115	GO:0016226: iron-sulfur cluster assembly	2.61E-02
116	GO:0006730: one-carbon metabolic process	2.61E-02
117	GO:0080092: regulation of pollen tube growth	2.61E-02
118	GO:0080167: response to karrikin	2.87E-02
119	GO:0006284: base-excision repair	2.94E-02
120	GO:0010584: pollen exine formation	2.94E-02
121	GO:0009740: gibberellic acid mediated signaling pathway	2.96E-02
122	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.00E-02
123	GO:0016117: carotenoid biosynthetic process	3.12E-02
124	GO:0009624: response to nematode	3.14E-02
125	GO:0009416: response to light stimulus	3.15E-02
126	GO:0045489: pectin biosynthetic process	3.48E-02
127	GO:0010154: fruit development	3.48E-02
128	GO:0009958: positive gravitropism	3.48E-02
129	GO:0046323: glucose import	3.48E-02
130	GO:0010268: brassinosteroid homeostasis	3.48E-02
131	GO:0007059: chromosome segregation	3.66E-02
132	GO:0009646: response to absence of light	3.66E-02
133	GO:0048825: cotyledon development	3.85E-02
134	GO:0009749: response to glucose	3.85E-02
135	GO:0002229: defense response to oomycetes	4.04E-02
136	GO:0016132: brassinosteroid biosynthetic process	4.04E-02
137	GO:0010583: response to cyclopentenone	4.23E-02
138	GO:0071281: cellular response to iron ion	4.43E-02
139	GO:0042744: hydrogen peroxide catabolic process	4.47E-02
140	GO:0009790: embryo development	4.58E-02
141	GO:0016125: sterol metabolic process	4.63E-02
142	GO:0006633: fatty acid biosynthetic process	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
2	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
3	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
4	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
5	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
6	GO:0019808: polyamine binding	0.00E+00
7	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
8	GO:0048039: ubiquinone binding	0.00E+00
9	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
10	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
11	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
12	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
13	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
14	GO:0030570: pectate lyase activity	3.31E-04
15	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	3.97E-04
16	GO:0005290: L-histidine transmembrane transporter activity	3.97E-04
17	GO:0004008: copper-exporting ATPase activity	3.97E-04
18	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	3.97E-04
19	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.97E-04
20	GO:0004830: tryptophan-tRNA ligase activity	3.97E-04
21	GO:0009672: auxin:proton symporter activity	7.90E-04
22	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	8.60E-04
23	GO:0000064: L-ornithine transmembrane transporter activity	8.60E-04
24	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	8.60E-04
25	GO:0004829: threonine-tRNA ligase activity	8.60E-04
26	GO:0050017: L-3-cyanoalanine synthase activity	8.60E-04
27	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	8.60E-04
28	GO:0004047: aminomethyltransferase activity	8.60E-04
29	GO:0046872: metal ion binding	1.34E-03
30	GO:0010329: auxin efflux transmembrane transporter activity	1.37E-03
31	GO:0045548: phenylalanine ammonia-lyase activity	1.40E-03
32	GO:0003913: DNA photolyase activity	1.40E-03
33	GO:0032549: ribonucleoside binding	1.40E-03
34	GO:0016805: dipeptidase activity	1.40E-03
35	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	1.40E-03
36	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	1.40E-03
37	GO:0015181: arginine transmembrane transporter activity	2.02E-03
38	GO:0009678: hydrogen-translocating pyrophosphatase activity	2.02E-03
39	GO:0017172: cysteine dioxygenase activity	2.02E-03
40	GO:0015189: L-lysine transmembrane transporter activity	2.02E-03
41	GO:0000254: C-4 methylsterol oxidase activity	2.02E-03
42	GO:0004176: ATP-dependent peptidase activity	2.60E-03
43	GO:0010328: auxin influx transmembrane transporter activity	2.71E-03
44	GO:0010385: double-stranded methylated DNA binding	2.71E-03
45	GO:0070628: proteasome binding	2.71E-03
46	GO:0009044: xylan 1,4-beta-xylosidase activity	2.71E-03
47	GO:0046556: alpha-L-arabinofuranosidase activity	2.71E-03
48	GO:0010011: auxin binding	2.71E-03
49	GO:0005471: ATP:ADP antiporter activity	3.47E-03
50	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.47E-03
51	GO:0008725: DNA-3-methyladenine glycosylase activity	3.47E-03
52	GO:0003924: GTPase activity	3.63E-03
53	GO:0031593: polyubiquitin binding	4.29E-03
54	GO:0004332: fructose-bisphosphate aldolase activity	4.29E-03
55	GO:0004144: diacylglycerol O-acyltransferase activity	5.17E-03
56	GO:0004559: alpha-mannosidase activity	5.17E-03
57	GO:0004124: cysteine synthase activity	5.17E-03
58	GO:0004518: nuclease activity	5.62E-03
59	GO:0004427: inorganic diphosphatase activity	6.11E-03
60	GO:0009881: photoreceptor activity	6.11E-03
61	GO:0019899: enzyme binding	6.11E-03
62	GO:0008235: metalloexopeptidase activity	6.11E-03
63	GO:0005375: copper ion transmembrane transporter activity	8.15E-03
64	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	8.15E-03
65	GO:0008142: oxysterol binding	8.15E-03
66	GO:0003747: translation release factor activity	9.25E-03
67	GO:0016829: lyase activity	9.25E-03
68	GO:0004805: trehalose-phosphatase activity	1.16E-02
69	GO:0015020: glucuronosyltransferase activity	1.16E-02
70	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.29E-02
71	GO:0008327: methyl-CpG binding	1.29E-02
72	GO:0001054: RNA polymerase I activity	1.29E-02
73	GO:0004177: aminopeptidase activity	1.29E-02
74	GO:0004161: dimethylallyltranstransferase activity	1.29E-02
75	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.55E-02
76	GO:0004185: serine-type carboxypeptidase activity	1.64E-02
77	GO:0043621: protein self-association	1.77E-02
78	GO:0035091: phosphatidylinositol binding	1.77E-02
79	GO:0051537: 2 iron, 2 sulfur cluster binding	1.77E-02
80	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.98E-02
81	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.98E-02
82	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.98E-02
83	GO:0043130: ubiquitin binding	2.13E-02
84	GO:0005345: purine nucleobase transmembrane transporter activity	2.29E-02
85	GO:0043424: protein histidine kinase binding	2.29E-02
86	GO:0005525: GTP binding	2.32E-02
87	GO:0004812: aminoacyl-tRNA ligase activity	3.12E-02
88	GO:0004402: histone acetyltransferase activity	3.29E-02
89	GO:0001085: RNA polymerase II transcription factor binding	3.48E-02
90	GO:0008536: Ran GTPase binding	3.48E-02
91	GO:0010181: FMN binding	3.66E-02
92	GO:0005355: glucose transmembrane transporter activity	3.66E-02
93	GO:0019901: protein kinase binding	3.85E-02
94	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.04E-02
95	GO:0000156: phosphorelay response regulator activity	4.43E-02
96	GO:0051015: actin filament binding	4.43E-02
97	GO:0003684: damaged DNA binding	4.63E-02
98	GO:0016791: phosphatase activity	4.63E-02
99	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.69E-02
100	GO:0015144: carbohydrate transmembrane transporter activity	4.69E-02
101	GO:0030246: carbohydrate binding	4.82E-02
102	GO:0008237: metallopeptidase activity	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
4	GO:0009507: chloroplast	1.97E-09
5	GO:0009570: chloroplast stroma	3.86E-04
6	GO:0010370: perinucleolar chromocenter	3.97E-04
7	GO:0009535: chloroplast thylakoid membrane	1.28E-03
8	GO:0009574: preprophase band	1.37E-03
9	GO:0032432: actin filament bundle	2.02E-03
10	GO:0009532: plastid stroma	2.60E-03
11	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	2.71E-03
12	GO:0072686: mitotic spindle	3.47E-03
13	GO:0010005: cortical microtubule, transverse to long axis	5.17E-03
14	GO:0009986: cell surface	6.11E-03
15	GO:0031305: integral component of mitochondrial inner membrane	7.10E-03
16	GO:0030529: intracellular ribonucleoprotein complex	7.61E-03
17	GO:0005811: lipid particle	8.15E-03
18	GO:0005720: nuclear heterochromatin	9.25E-03
19	GO:0005736: DNA-directed RNA polymerase I complex	9.25E-03
20	GO:0005768: endosome	9.58E-03
21	GO:0009707: chloroplast outer membrane	9.96E-03
22	GO:0005740: mitochondrial envelope	1.16E-02
23	GO:0016324: apical plasma membrane	1.16E-02
24	GO:0055028: cortical microtubule	1.16E-02
25	GO:0005884: actin filament	1.29E-02
26	GO:0000311: plastid large ribosomal subunit	1.42E-02
27	GO:0005938: cell cortex	1.55E-02
28	GO:0016602: CCAAT-binding factor complex	1.55E-02
29	GO:0009505: plant-type cell wall	1.81E-02
30	GO:0009941: chloroplast envelope	2.16E-02
31	GO:0005802: trans-Golgi network	2.22E-02
32	GO:0005770: late endosome	3.48E-02
33	GO:0009536: plastid	4.59E-02
34	GO:0009295: nucleoid	4.83E-02