co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G13250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
4	GO:0080127: fruit septum development	0.00E+00
5	GO:0032212: positive regulation of telomere maintenance via telomerase	0.00E+00
6	GO:0032206: positive regulation of telomere maintenance	0.00E+00
7	GO:0046486: glycerolipid metabolic process	0.00E+00
8	GO:0006907: pinocytosis	0.00E+00
9	GO:0009733: response to auxin	7.58E-07
10	GO:0009734: auxin-activated signaling pathway	1.05E-06
11	GO:0009926: auxin polar transport	7.42E-06
12	GO:0006650: glycerophospholipid metabolic process	9.54E-06
13	GO:0046620: regulation of organ growth	2.33E-05
14	GO:0009686: gibberellin biosynthetic process	3.40E-05
15	GO:0048829: root cap development	7.63E-05
16	GO:0010583: response to cyclopentenone	1.08E-04
17	GO:0051013: microtubule severing	4.64E-04
18	GO:0045786: negative regulation of cell cycle	4.64E-04
19	GO:0010726: positive regulation of hydrogen peroxide metabolic process	4.64E-04
20	GO:0032958: inositol phosphate biosynthetic process	4.64E-04
21	GO:0010070: zygote asymmetric cell division	4.64E-04
22	GO:0007186: G-protein coupled receptor signaling pathway	7.02E-04
23	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.50E-04
24	GO:0043039: tRNA aminoacylation	1.00E-03
25	GO:0010069: zygote asymmetric cytokinesis in embryo sac	1.00E-03
26	GO:0061062: regulation of nematode larval development	1.00E-03
27	GO:0001736: establishment of planar polarity	1.00E-03
28	GO:0009786: regulation of asymmetric cell division	1.00E-03
29	GO:0006782: protoporphyrinogen IX biosynthetic process	1.15E-03
30	GO:0005983: starch catabolic process	1.52E-03
31	GO:0010582: floral meristem determinacy	1.52E-03
32	GO:0048575: short-day photoperiodism, flowering	1.63E-03
33	GO:0045910: negative regulation of DNA recombination	1.63E-03
34	GO:0090506: axillary shoot meristem initiation	1.63E-03
35	GO:0034090: maintenance of meiotic sister chromatid cohesion	1.63E-03
36	GO:0046168: glycerol-3-phosphate catabolic process	1.63E-03
37	GO:0006518: peptide metabolic process	1.63E-03
38	GO:0006468: protein phosphorylation	1.71E-03
39	GO:0009887: animal organ morphogenesis	1.95E-03
40	GO:0009825: multidimensional cell growth	2.19E-03
41	GO:0006020: inositol metabolic process	2.37E-03
42	GO:0007276: gamete generation	2.37E-03
43	GO:0006072: glycerol-3-phosphate metabolic process	2.37E-03
44	GO:0045017: glycerolipid biosynthetic process	2.37E-03
45	GO:0006863: purine nucleobase transport	2.44E-03
46	GO:0048629: trichome patterning	3.18E-03
47	GO:0042991: transcription factor import into nucleus	3.18E-03
48	GO:0006021: inositol biosynthetic process	3.18E-03
49	GO:0009956: radial pattern formation	3.18E-03
50	GO:0003333: amino acid transmembrane transport	3.28E-03
51	GO:0009107: lipoate biosynthetic process	4.08E-03
52	GO:0010158: abaxial cell fate specification	4.08E-03
53	GO:0045487: gibberellin catabolic process	4.08E-03
54	GO:0048497: maintenance of floral organ identity	4.08E-03
55	GO:0042127: regulation of cell proliferation	4.27E-03
56	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	5.05E-03
57	GO:0016554: cytidine to uridine editing	5.05E-03
58	GO:0009913: epidermal cell differentiation	5.05E-03
59	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	5.05E-03
60	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	5.05E-03
61	GO:0003006: developmental process involved in reproduction	5.05E-03
62	GO:0010942: positive regulation of cell death	5.05E-03
63	GO:0009958: positive gravitropism	5.39E-03
64	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	6.09E-03
65	GO:0009942: longitudinal axis specification	6.09E-03
66	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	6.09E-03
67	GO:0048825: cotyledon development	6.23E-03
68	GO:0008654: phospholipid biosynthetic process	6.23E-03
69	GO:0071554: cell wall organization or biogenesis	6.67E-03
70	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	7.20E-03
71	GO:0007050: cell cycle arrest	7.20E-03
72	GO:0010050: vegetative phase change	7.20E-03
73	GO:0000082: G1/S transition of mitotic cell cycle	7.20E-03
74	GO:0010098: suspensor development	7.20E-03
75	GO:0010444: guard mother cell differentiation	7.20E-03
76	GO:0009740: gibberellic acid mediated signaling pathway	7.87E-03
77	GO:0000105: histidine biosynthetic process	8.39E-03
78	GO:0006402: mRNA catabolic process	8.39E-03
79	GO:0009850: auxin metabolic process	8.39E-03
80	GO:0010492: maintenance of shoot apical meristem identity	8.39E-03
81	GO:0009624: response to nematode	8.50E-03
82	GO:0009657: plastid organization	9.63E-03
83	GO:0032544: plastid translation	9.63E-03
84	GO:0007389: pattern specification process	9.63E-03
85	GO:0009056: catabolic process	1.09E-02
86	GO:0048507: meristem development	1.09E-02
87	GO:0000373: Group II intron splicing	1.09E-02
88	GO:0048589: developmental growth	1.09E-02
89	GO:0015995: chlorophyll biosynthetic process	1.14E-02
90	GO:0048573: photoperiodism, flowering	1.14E-02
91	GO:0005982: starch metabolic process	1.23E-02
92	GO:0006779: porphyrin-containing compound biosynthetic process	1.23E-02
93	GO:0000723: telomere maintenance	1.23E-02
94	GO:1900865: chloroplast RNA modification	1.23E-02
95	GO:0042761: very long-chain fatty acid biosynthetic process	1.23E-02
96	GO:0010311: lateral root formation	1.33E-02
97	GO:0009832: plant-type cell wall biogenesis	1.33E-02
98	GO:0009641: shade avoidance	1.37E-02
99	GO:0006298: mismatch repair	1.37E-02
100	GO:0010192: mucilage biosynthetic process	1.37E-02
101	GO:0006811: ion transport	1.40E-02
102	GO:0009416: response to light stimulus	1.49E-02
103	GO:0008285: negative regulation of cell proliferation	1.52E-02
104	GO:0009750: response to fructose	1.52E-02
105	GO:0048765: root hair cell differentiation	1.52E-02
106	GO:0006865: amino acid transport	1.54E-02
107	GO:0006351: transcription, DNA-templated	1.61E-02
108	GO:0006790: sulfur compound metabolic process	1.68E-02
109	GO:0045037: protein import into chloroplast stroma	1.68E-02
110	GO:0010152: pollen maturation	1.68E-02
111	GO:0051301: cell division	1.73E-02
112	GO:0010102: lateral root morphogenesis	1.84E-02
113	GO:0030001: metal ion transport	1.84E-02
114	GO:2000028: regulation of photoperiodism, flowering	1.84E-02
115	GO:0009739: response to gibberellin	1.97E-02
116	GO:0010540: basipetal auxin transport	2.00E-02
117	GO:0006302: double-strand break repair	2.00E-02
118	GO:0048768: root hair cell tip growth	2.00E-02
119	GO:0048467: gynoecium development	2.00E-02
120	GO:0010020: chloroplast fission	2.00E-02
121	GO:0009933: meristem structural organization	2.00E-02
122	GO:0010207: photosystem II assembly	2.00E-02
123	GO:0010223: secondary shoot formation	2.00E-02
124	GO:0048364: root development	2.04E-02
125	GO:0009744: response to sucrose	2.08E-02
126	GO:0042546: cell wall biogenesis	2.16E-02
127	GO:0046854: phosphatidylinositol phosphorylation	2.17E-02
128	GO:0080188: RNA-directed DNA methylation	2.17E-02
129	GO:0009833: plant-type primary cell wall biogenesis	2.35E-02
130	GO:0010025: wax biosynthetic process	2.35E-02
131	GO:0006418: tRNA aminoacylation for protein translation	2.71E-02
132	GO:0006874: cellular calcium ion homeostasis	2.71E-02
133	GO:0043622: cortical microtubule organization	2.71E-02
134	GO:0009736: cytokinin-activated signaling pathway	2.80E-02
135	GO:0006306: DNA methylation	2.90E-02
136	GO:0051321: meiotic cell cycle	2.90E-02
137	GO:0009658: chloroplast organization	2.96E-02
138	GO:0010082: regulation of root meristem growth	3.29E-02
139	GO:0001944: vasculature development	3.29E-02
140	GO:0048443: stamen development	3.49E-02
141	GO:0006284: base-excision repair	3.49E-02
142	GO:0010091: trichome branching	3.49E-02
143	GO:0000226: microtubule cytoskeleton organization	3.91E-02
144	GO:0009741: response to brassinosteroid	4.12E-02
145	GO:0010305: leaf vascular tissue pattern formation	4.12E-02
146	GO:0010182: sugar mediated signaling pathway	4.12E-02
147	GO:0051726: regulation of cell cycle	4.22E-02
148	GO:0007018: microtubule-based movement	4.34E-02
149	GO:0009749: response to glucose	4.56E-02
150	GO:0002229: defense response to oomycetes	4.78E-02
151	GO:0045892: negative regulation of transcription, DNA-templated	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
2	GO:0004401: histidinol-phosphatase activity	0.00E+00
3	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
4	GO:0009899: ent-kaurene synthase activity	0.00E+00
5	GO:0010011: auxin binding	1.23E-04
6	GO:0010328: auxin influx transmembrane transporter activity	1.23E-04
7	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	4.64E-04
8	GO:0010347: L-galactose-1-phosphate phosphatase activity	4.64E-04
9	GO:0000829: inositol heptakisphosphate kinase activity	4.64E-04
10	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	4.64E-04
11	GO:0005227: calcium activated cation channel activity	4.64E-04
12	GO:0000828: inositol hexakisphosphate kinase activity	4.64E-04
13	GO:0004831: tyrosine-tRNA ligase activity	4.64E-04
14	GO:0008568: microtubule-severing ATPase activity	4.64E-04
15	GO:0019203: carbohydrate phosphatase activity	4.64E-04
16	GO:0045543: gibberellin 2-beta-dioxygenase activity	1.00E-03
17	GO:0010296: prenylcysteine methylesterase activity	1.00E-03
18	GO:0016415: octanoyltransferase activity	1.00E-03
19	GO:0052832: inositol monophosphate 3-phosphatase activity	1.00E-03
20	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.00E-03
21	GO:0004109: coproporphyrinogen oxidase activity	1.00E-03
22	GO:0008805: carbon-monoxide oxygenase activity	1.00E-03
23	GO:0008934: inositol monophosphate 1-phosphatase activity	1.00E-03
24	GO:0052833: inositol monophosphate 4-phosphatase activity	1.00E-03
25	GO:0019156: isoamylase activity	1.00E-03
26	GO:0017118: lipoyltransferase activity	1.00E-03
27	GO:0016707: gibberellin 3-beta-dioxygenase activity	1.63E-03
28	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.63E-03
29	GO:0045544: gibberellin 20-oxidase activity	2.37E-03
30	GO:0001872: (1->3)-beta-D-glucan binding	2.37E-03
31	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	2.37E-03
32	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.37E-03
33	GO:0043047: single-stranded telomeric DNA binding	2.37E-03
34	GO:0005345: purine nucleobase transmembrane transporter activity	2.99E-03
35	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	3.18E-03
36	GO:0019199: transmembrane receptor protein kinase activity	3.18E-03
37	GO:0004930: G-protein coupled receptor activity	3.18E-03
38	GO:0016301: kinase activity	3.58E-03
39	GO:0008725: DNA-3-methyladenine glycosylase activity	4.08E-03
40	GO:0008374: O-acyltransferase activity	4.08E-03
41	GO:0004871: signal transducer activity	4.14E-03
42	GO:0030983: mismatched DNA binding	5.05E-03
43	GO:0004709: MAP kinase kinase kinase activity	5.05E-03
44	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	5.05E-03
45	GO:0030332: cyclin binding	5.05E-03
46	GO:0004556: alpha-amylase activity	5.05E-03
47	GO:0004462: lactoylglutathione lyase activity	5.05E-03
48	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	6.09E-03
49	GO:0019901: protein kinase binding	6.23E-03
50	GO:0004518: nuclease activity	7.13E-03
51	GO:0042162: telomeric DNA binding	7.20E-03
52	GO:0016413: O-acetyltransferase activity	9.13E-03
53	GO:0004674: protein serine/threonine kinase activity	9.42E-03
54	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.09E-02
55	GO:0030247: polysaccharide binding	1.14E-02
56	GO:0009672: auxin:proton symporter activity	1.23E-02
57	GO:0005515: protein binding	1.48E-02
58	GO:0042803: protein homodimerization activity	1.50E-02
59	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.76E-02
60	GO:0010329: auxin efflux transmembrane transporter activity	1.84E-02
61	GO:0003725: double-stranded RNA binding	1.84E-02
62	GO:0005217: intracellular ligand-gated ion channel activity	2.17E-02
63	GO:0008061: chitin binding	2.17E-02
64	GO:0003712: transcription cofactor activity	2.17E-02
65	GO:0004970: ionotropic glutamate receptor activity	2.17E-02
66	GO:0043565: sequence-specific DNA binding	2.24E-02
67	GO:0043621: protein self-association	2.25E-02
68	GO:0015293: symporter activity	2.34E-02
69	GO:0008134: transcription factor binding	2.53E-02
70	GO:0008408: 3'-5' exonuclease activity	2.90E-02
71	GO:0033612: receptor serine/threonine kinase binding	2.90E-02
72	GO:0003777: microtubule motor activity	3.11E-02
73	GO:0015171: amino acid transmembrane transporter activity	3.11E-02
74	GO:0016760: cellulose synthase (UDP-forming) activity	3.29E-02
75	GO:0030570: pectate lyase activity	3.29E-02
76	GO:0004812: aminoacyl-tRNA ligase activity	3.70E-02
77	GO:0004672: protein kinase activity	3.80E-02
78	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.81E-02
79	GO:0015035: protein disulfide oxidoreductase activity	4.10E-02
80	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	4.12E-02
81	GO:0016853: isomerase activity	4.34E-02
82	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0031224: intrinsic component of membrane	0.00E+00
4	GO:0009986: cell surface	4.62E-04
5	GO:0000791: euchromatin	4.64E-04
6	GO:0009569: chloroplast starch grain	1.00E-03
7	GO:0005697: telomerase holoenzyme complex	1.00E-03
8	GO:0030870: Mre11 complex	1.00E-03
9	GO:0030139: endocytic vesicle	1.63E-03
10	GO:0009531: secondary cell wall	2.37E-03
11	GO:0032585: multivesicular body membrane	2.37E-03
12	GO:0009331: glycerol-3-phosphate dehydrogenase complex	2.37E-03
13	GO:0000795: synaptonemal complex	4.08E-03
14	GO:0009507: chloroplast	4.10E-03
15	GO:0009570: chloroplast stroma	4.65E-03
16	GO:0000784: nuclear chromosome, telomeric region	9.63E-03
17	GO:0009707: chloroplast outer membrane	1.27E-02
18	GO:0005886: plasma membrane	1.73E-02
19	GO:0009508: plastid chromosome	1.84E-02
20	GO:0031977: thylakoid lumen	1.92E-02
21	GO:0030095: chloroplast photosystem II	2.00E-02
22	GO:0000419: DNA-directed RNA polymerase V complex	2.35E-02
23	GO:0005875: microtubule associated complex	2.35E-02
24	GO:0009654: photosystem II oxygen evolving complex	2.71E-02
25	GO:0005874: microtubule	3.70E-02
26	GO:0005871: kinesin complex	3.70E-02
27	GO:0019898: extrinsic component of membrane	4.56E-02
28	GO:0009504: cell plate	4.56E-02