GO Enrichment Analysis of Co-expressed Genes with
AT1G13060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1900424: regulation of defense response to bacterium | 1.67E-05 |
| 2 | GO:0050688: regulation of defense response to virus | 4.35E-05 |
| 3 | GO:0031124: mRNA 3'-end processing | 4.35E-05 |
| 4 | GO:0010498: proteasomal protein catabolic process | 7.77E-05 |
| 5 | GO:0010255: glucose mediated signaling pathway | 1.17E-04 |
| 6 | GO:0033320: UDP-D-xylose biosynthetic process | 1.61E-04 |
| 7 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 2.59E-04 |
| 8 | GO:0048827: phyllome development | 2.59E-04 |
| 9 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 2.59E-04 |
| 10 | GO:0042732: D-xylose metabolic process | 2.59E-04 |
| 11 | GO:0009612: response to mechanical stimulus | 3.11E-04 |
| 12 | GO:0006491: N-glycan processing | 4.23E-04 |
| 13 | GO:0048766: root hair initiation | 4.23E-04 |
| 14 | GO:0009553: embryo sac development | 4.63E-04 |
| 15 | GO:0009932: cell tip growth | 4.82E-04 |
| 16 | GO:0006379: mRNA cleavage | 5.42E-04 |
| 17 | GO:0006511: ubiquitin-dependent protein catabolic process | 6.47E-04 |
| 18 | GO:0048765: root hair cell differentiation | 7.34E-04 |
| 19 | GO:0006378: mRNA polyadenylation | 7.34E-04 |
| 20 | GO:0046856: phosphatidylinositol dephosphorylation | 7.34E-04 |
| 21 | GO:0010053: root epidermal cell differentiation | 1.01E-03 |
| 22 | GO:0009225: nucleotide-sugar metabolic process | 1.01E-03 |
| 23 | GO:0000027: ribosomal large subunit assembly | 1.16E-03 |
| 24 | GO:0006338: chromatin remodeling | 1.16E-03 |
| 25 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.39E-03 |
| 26 | GO:0030163: protein catabolic process | 2.28E-03 |
| 27 | GO:0016051: carbohydrate biosynthetic process | 3.76E-03 |
| 28 | GO:0009926: auxin polar transport | 4.47E-03 |
| 29 | GO:0006486: protein glycosylation | 5.48E-03 |
| 30 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.61E-03 |
| 31 | GO:0016569: covalent chromatin modification | 6.70E-03 |
| 32 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.06E-02 |
| 33 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.11E-02 |
| 34 | GO:0006470: protein dephosphorylation | 1.12E-02 |
| 35 | GO:0009617: response to bacterium | 1.16E-02 |
| 36 | GO:0046686: response to cadmium ion | 1.21E-02 |
| 37 | GO:0042254: ribosome biogenesis | 1.41E-02 |
| 38 | GO:0044550: secondary metabolite biosynthetic process | 1.72E-02 |
| 39 | GO:0006397: mRNA processing | 2.21E-02 |
| 40 | GO:0048364: root development | 2.21E-02 |
| 41 | GO:0008152: metabolic process | 2.29E-02 |
| 42 | GO:0009908: flower development | 3.00E-02 |
| 43 | GO:0009555: pollen development | 3.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051731: polynucleotide 5'-hydroxyl-kinase activity | 4.35E-05 |
| 2 | GO:0008253: 5'-nucleotidase activity | 7.77E-05 |
| 3 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 1.17E-04 |
| 4 | GO:0036402: proteasome-activating ATPase activity | 2.59E-04 |
| 5 | GO:0048040: UDP-glucuronate decarboxylase activity | 2.59E-04 |
| 6 | GO:0004559: alpha-mannosidase activity | 3.11E-04 |
| 7 | GO:0070403: NAD+ binding | 3.11E-04 |
| 8 | GO:0017025: TBP-class protein binding | 1.01E-03 |
| 9 | GO:0004725: protein tyrosine phosphatase activity | 1.08E-03 |
| 10 | GO:0043424: protein histidine kinase binding | 1.23E-03 |
| 11 | GO:0004298: threonine-type endopeptidase activity | 1.31E-03 |
| 12 | GO:0004402: histone acetyltransferase activity | 1.73E-03 |
| 13 | GO:0004722: protein serine/threonine phosphatase activity | 1.95E-03 |
| 14 | GO:0008375: acetylglucosaminyltransferase activity | 2.88E-03 |
| 15 | GO:0004721: phosphoprotein phosphatase activity | 2.99E-03 |
| 16 | GO:0031625: ubiquitin protein ligase binding | 5.88E-03 |
| 17 | GO:0008233: peptidase activity | 1.60E-02 |
| 18 | GO:0016787: hydrolase activity | 1.66E-02 |
| 19 | GO:0061630: ubiquitin protein ligase activity | 1.68E-02 |
| 20 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.95E-02 |
| 21 | GO:0016887: ATPase activity | 2.92E-02 |
| 22 | GO:0000166: nucleotide binding | 3.22E-02 |
| 23 | GO:0019825: oxygen binding | 4.14E-02 |
| 24 | GO:0005516: calmodulin binding | 4.31E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019867: outer membrane | 0.00E+00 |
| 2 | GO:0000502: proteasome complex | 1.06E-05 |
| 3 | GO:0005838: proteasome regulatory particle | 7.77E-05 |
| 4 | GO:0005849: mRNA cleavage factor complex | 1.17E-04 |
| 5 | GO:0031597: cytosolic proteasome complex | 3.11E-04 |
| 6 | GO:0031595: nuclear proteasome complex | 3.66E-04 |
| 7 | GO:0008540: proteasome regulatory particle, base subcomplex | 6.04E-04 |
| 8 | GO:0048471: perinuclear region of cytoplasm | 7.34E-04 |
| 9 | GO:0008541: proteasome regulatory particle, lid subcomplex | 7.34E-04 |
| 10 | GO:0031307: integral component of mitochondrial outer membrane | 8.01E-04 |
| 11 | GO:0005839: proteasome core complex | 1.31E-03 |
| 12 | GO:0005783: endoplasmic reticulum | 2.56E-03 |
| 13 | GO:0005829: cytosol | 6.59E-03 |
| 14 | GO:0005840: ribosome | 8.10E-03 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 8.17E-03 |
| 16 | GO:0005634: nucleus | 1.35E-02 |
| 17 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.49E-02 |
| 18 | GO:0016020: membrane | 1.78E-02 |
| 19 | GO:0005774: vacuolar membrane | 2.69E-02 |
| 20 | GO:0022626: cytosolic ribosome | 3.12E-02 |
| 21 | GO:0005737: cytoplasm | 3.95E-02 |
| 22 | GO:0005794: Golgi apparatus | 4.00E-02 |
| 23 | GO:0005802: trans-Golgi network | 4.51E-02 |
| 24 | GO:0005768: endosome | 4.94E-02 |