Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G12420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006396: RNA processing8.86E-06
2GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway1.13E-05
3GO:0000303: response to superoxide1.13E-05
4GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic1.13E-05
5GO:0003400: regulation of COPII vesicle coating1.13E-05
6GO:0042539: hypotonic salinity response1.13E-05
7GO:0008535: respiratory chain complex IV assembly3.00E-05
8GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic5.40E-05
9GO:0042256: mature ribosome assembly5.40E-05
10GO:0042780: tRNA 3'-end processing5.40E-05
11GO:0009152: purine ribonucleotide biosynthetic process8.23E-05
12GO:0006809: nitric oxide biosynthetic process8.23E-05
13GO:0007112: male meiosis cytokinesis1.14E-04
14GO:0034613: cellular protein localization1.14E-04
15GO:0001731: formation of translation preinitiation complex1.86E-04
16GO:0000911: cytokinesis by cell plate formation2.25E-04
17GO:0009903: chloroplast avoidance movement2.25E-04
18GO:0009861: jasmonic acid and ethylene-dependent systemic resistance2.25E-04
19GO:0006972: hyperosmotic response3.52E-04
20GO:0006189: 'de novo' IMP biosynthetic process3.97E-04
21GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.44E-04
22GO:0012501: programmed cell death5.89E-04
23GO:0010102: lateral root morphogenesis6.40E-04
24GO:0034605: cellular response to heat6.92E-04
25GO:0006446: regulation of translational initiation6.92E-04
26GO:2000377: regulation of reactive oxygen species metabolic process8.54E-04
27GO:0006418: tRNA aminoacylation for protein translation9.08E-04
28GO:0043622: cortical microtubule organization9.08E-04
29GO:0006817: phosphate ion transport1.14E-03
30GO:0009306: protein secretion1.14E-03
31GO:0009408: response to heat1.36E-03
32GO:0010193: response to ozone1.52E-03
33GO:0016032: viral process1.59E-03
34GO:0009816: defense response to bacterium, incompatible interaction2.02E-03
35GO:0006888: ER to Golgi vesicle-mediated transport2.17E-03
36GO:0009867: jasmonic acid mediated signaling pathway2.72E-03
37GO:0042542: response to hydrogen peroxide3.14E-03
38GO:0009644: response to high light intensity3.41E-03
39GO:0006486: protein glycosylation3.95E-03
40GO:0009620: response to fungus4.73E-03
41GO:0006979: response to oxidative stress4.82E-03
42GO:0009058: biosynthetic process6.09E-03
43GO:0009790: embryo development6.54E-03
44GO:0016036: cellular response to phosphate starvation6.99E-03
45GO:0006470: protein dephosphorylation8.05E-03
46GO:0010468: regulation of gene expression8.30E-03
47GO:0042254: ribosome biogenesis1.01E-02
48GO:0006970: response to osmotic stress1.05E-02
49GO:0009860: pollen tube growth1.05E-02
50GO:0009723: response to ethylene1.10E-02
51GO:0009651: response to salt stress1.61E-02
52GO:0009873: ethylene-activated signaling pathway1.83E-02
53GO:0009738: abscisic acid-activated signaling pathway2.24E-02
54GO:0009555: pollen development2.29E-02
55GO:0006457: protein folding2.76E-02
56GO:0006468: protein phosphorylation3.71E-02
57GO:0009414: response to water deprivation3.73E-02
58GO:0071555: cell wall organization3.80E-02
59GO:0009409: response to cold4.71E-02
60GO:0006810: transport4.99E-02
RankGO TermAdjusted P value
1GO:0003963: RNA-3'-phosphate cyclase activity0.00E+00
2GO:0004644: phosphoribosylglycinamide formyltransferase activity0.00E+00
3GO:0005090: Sar guanyl-nucleotide exchange factor activity1.13E-05
4GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters3.00E-05
5GO:0042781: 3'-tRNA processing endoribonuclease activity5.40E-05
6GO:0016742: hydroxymethyl-, formyl- and related transferase activity5.40E-05
7GO:0008864: formyltetrahydrofolate deformylase activity5.40E-05
8GO:0035252: UDP-xylosyltransferase activity1.86E-04
9GO:0051020: GTPase binding2.25E-04
10GO:0003950: NAD+ ADP-ribosyltransferase activity2.25E-04
11GO:0004525: ribonuclease III activity3.08E-04
12GO:0008378: galactosyltransferase activity5.89E-04
13GO:0004707: MAP kinase activity9.65E-04
14GO:0004812: aminoacyl-tRNA ligase activity1.20E-03
15GO:0004721: phosphoprotein phosphatase activity2.17E-03
16GO:0004004: ATP-dependent RNA helicase activity2.17E-03
17GO:0005096: GTPase activator activity2.40E-03
18GO:0003824: catalytic activity5.24E-03
19GO:0004386: helicase activity5.34E-03
20GO:0016758: transferase activity, transferring hexosyl groups5.76E-03
21GO:0003743: translation initiation factor activity8.18E-03
22GO:0004722: protein serine/threonine phosphatase activity1.40E-02
23GO:0003676: nucleic acid binding1.97E-02
24GO:0000166: nucleotide binding2.29E-02
25GO:0030246: carbohydrate binding2.84E-02
26GO:0016491: oxidoreductase activity4.62E-02
27GO:0004672: protein kinase activity4.99E-02
28GO:0005524: ATP binding4.99E-02
RankGO TermAdjusted P value
1GO:0005737: cytoplasm1.05E-04
2GO:0016282: eukaryotic 43S preinitiation complex1.86E-04
3GO:0016363: nuclear matrix2.25E-04
4GO:0033290: eukaryotic 48S preinitiation complex2.25E-04
5GO:0030176: integral component of endoplasmic reticulum membrane7.45E-04
6GO:0009504: cell plate1.46E-03
7GO:0005788: endoplasmic reticulum lumen2.02E-03
8GO:0000139: Golgi membrane6.46E-03
9GO:0005874: microtubule1.13E-02
10GO:0005743: mitochondrial inner membrane1.45E-02
11GO:0005777: peroxisome2.53E-02
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Gene type



Gene DE type