co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G11740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:0070455: positive regulation of heme biosynthetic process	0.00E+00
5	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
6	GO:0010070: zygote asymmetric cell division	1.88E-04
7	GO:0051013: microtubule severing	1.88E-04
8	GO:0034757: negative regulation of iron ion transport	1.88E-04
9	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.88E-04
10	GO:0007186: G-protein coupled receptor signaling pathway	1.88E-04
11	GO:0051726: regulation of cell cycle	2.43E-04
12	GO:0010271: regulation of chlorophyll catabolic process	4.24E-04
13	GO:0010069: zygote asymmetric cytokinesis in embryo sac	4.24E-04
14	GO:0009825: multidimensional cell growth	6.12E-04
15	GO:0080117: secondary growth	6.92E-04
16	GO:0033014: tetrapyrrole biosynthetic process	9.86E-04
17	GO:0034059: response to anoxia	9.86E-04
18	GO:0009956: radial pattern formation	1.31E-03
19	GO:0009741: response to brassinosteroid	1.46E-03
20	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.49E-03
21	GO:0009696: salicylic acid metabolic process	1.66E-03
22	GO:0010583: response to cyclopentenone	1.92E-03
23	GO:0048831: regulation of shoot system development	2.05E-03
24	GO:0003006: developmental process involved in reproduction	2.05E-03
25	GO:0010942: positive regulation of cell death	2.05E-03
26	GO:0010358: leaf shaping	2.05E-03
27	GO:0048509: regulation of meristem development	2.46E-03
28	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.46E-03
29	GO:0010444: guard mother cell differentiation	2.90E-03
30	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.90E-03
31	GO:0009610: response to symbiotic fungus	2.90E-03
32	GO:0000082: G1/S transition of mitotic cell cycle	2.90E-03
33	GO:0015995: chlorophyll biosynthetic process	3.04E-03
34	GO:0000160: phosphorelay signal transduction system	3.53E-03
35	GO:0009657: plastid organization	3.84E-03
36	GO:0046916: cellular transition metal ion homeostasis	4.35E-03
37	GO:0006783: heme biosynthetic process	4.35E-03
38	GO:0000373: Group II intron splicing	4.35E-03
39	GO:0048589: developmental growth	4.35E-03
40	GO:0009056: catabolic process	4.35E-03
41	GO:0048507: meristem development	4.35E-03
42	GO:0006468: protein phosphorylation	4.81E-03
43	GO:0030001: metal ion transport	4.84E-03
44	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.42E-03
45	GO:0006782: protoporphyrinogen IX biosynthetic process	5.42E-03
46	GO:0009744: response to sucrose	5.48E-03
47	GO:0042546: cell wall biogenesis	5.70E-03
48	GO:0009750: response to fructose	5.99E-03
49	GO:0016485: protein processing	5.99E-03
50	GO:0007049: cell cycle	6.32E-03
51	GO:0010152: pollen maturation	6.58E-03
52	GO:0045037: protein import into chloroplast stroma	6.58E-03
53	GO:0010582: floral meristem determinacy	6.58E-03
54	GO:0051301: cell division	6.96E-03
55	GO:0009767: photosynthetic electron transport chain	7.19E-03
56	GO:0010588: cotyledon vascular tissue pattern formation	7.19E-03
57	GO:0009736: cytokinin-activated signaling pathway	7.38E-03
58	GO:0010207: photosystem II assembly	7.82E-03
59	GO:0010540: basipetal auxin transport	7.82E-03
60	GO:0006302: double-strand break repair	7.82E-03
61	GO:0048467: gynoecium development	7.82E-03
62	GO:0010020: chloroplast fission	7.82E-03
63	GO:0009933: meristem structural organization	7.82E-03
64	GO:0009909: regulation of flower development	8.18E-03
65	GO:0080188: RNA-directed DNA methylation	8.47E-03
66	GO:0006874: cellular calcium ion homeostasis	1.05E-02
67	GO:0043622: cortical microtubule organization	1.05E-02
68	GO:0051321: meiotic cell cycle	1.13E-02
69	GO:0006306: DNA methylation	1.13E-02
70	GO:0016226: iron-sulfur cluster assembly	1.20E-02
71	GO:0071215: cellular response to abscisic acid stimulus	1.28E-02
72	GO:0010091: trichome branching	1.35E-02
73	GO:0042127: regulation of cell proliferation	1.35E-02
74	GO:0048443: stamen development	1.35E-02
75	GO:0006284: base-excision repair	1.35E-02
76	GO:0070417: cellular response to cold	1.43E-02
77	GO:0000271: polysaccharide biosynthetic process	1.51E-02
78	GO:0010087: phloem or xylem histogenesis	1.51E-02
79	GO:0000226: microtubule cytoskeleton organization	1.51E-02
80	GO:0009958: positive gravitropism	1.60E-02
81	GO:0010268: brassinosteroid homeostasis	1.60E-02
82	GO:0045489: pectin biosynthetic process	1.60E-02
83	GO:0010305: leaf vascular tissue pattern formation	1.60E-02
84	GO:0040008: regulation of growth	1.74E-02
85	GO:0009749: response to glucose	1.77E-02
86	GO:0009791: post-embryonic development	1.77E-02
87	GO:0016132: brassinosteroid biosynthetic process	1.85E-02
88	GO:0002229: defense response to oomycetes	1.85E-02
89	GO:0031047: gene silencing by RNA	1.94E-02
90	GO:0009733: response to auxin	2.11E-02
91	GO:0016125: sterol metabolic process	2.13E-02
92	GO:0071805: potassium ion transmembrane transport	2.22E-02
93	GO:0000910: cytokinesis	2.31E-02
94	GO:0016126: sterol biosynthetic process	2.41E-02
95	GO:0009416: response to light stimulus	2.45E-02
96	GO:0010029: regulation of seed germination	2.51E-02
97	GO:0009627: systemic acquired resistance	2.61E-02
98	GO:0010411: xyloglucan metabolic process	2.71E-02
99	GO:0009658: chloroplast organization	2.83E-02
100	GO:0009817: defense response to fungus, incompatible interaction	2.91E-02
101	GO:0009832: plant-type cell wall biogenesis	3.02E-02
102	GO:0006811: ion transport	3.12E-02
103	GO:0007568: aging	3.23E-02
104	GO:0048366: leaf development	3.33E-02
105	GO:0016567: protein ubiquitination	3.38E-02
106	GO:0009867: jasmonic acid mediated signaling pathway	3.45E-02
107	GO:0016051: carbohydrate biosynthetic process	3.45E-02
108	GO:0009926: auxin polar transport	4.13E-02
109	GO:0009636: response to toxic substance	4.48E-02
110	GO:0009965: leaf morphogenesis	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.16E-04
3	GO:0008568: microtubule-severing ATPase activity	1.88E-04
4	GO:0010012: steroid 22-alpha hydroxylase activity	1.88E-04
5	GO:0010296: prenylcysteine methylesterase activity	4.24E-04
6	GO:0004047: aminomethyltransferase activity	4.24E-04
7	GO:0004109: coproporphyrinogen oxidase activity	4.24E-04
8	GO:0008805: carbon-monoxide oxygenase activity	4.24E-04
9	GO:0009884: cytokinin receptor activity	4.24E-04
10	GO:0005034: osmosensor activity	6.92E-04
11	GO:0080031: methyl salicylate esterase activity	9.86E-04
12	GO:0010011: auxin binding	1.31E-03
13	GO:0043495: protein anchor	1.31E-03
14	GO:0004930: G-protein coupled receptor activity	1.31E-03
15	GO:0008725: DNA-3-methyladenine glycosylase activity	1.66E-03
16	GO:0080030: methyl indole-3-acetate esterase activity	2.05E-03
17	GO:0019900: kinase binding	2.46E-03
18	GO:0046914: transition metal ion binding	3.84E-03
19	GO:0005515: protein binding	4.16E-03
20	GO:0004673: protein histidine kinase activity	5.42E-03
21	GO:0043621: protein self-association	5.93E-03
22	GO:0019904: protein domain specific binding	5.99E-03
23	GO:0000155: phosphorelay sensor kinase activity	7.19E-03
24	GO:0004970: ionotropic glutamate receptor activity	8.47E-03
25	GO:0005217: intracellular ligand-gated ion channel activity	8.47E-03
26	GO:0004871: signal transducer activity	9.64E-03
27	GO:0015079: potassium ion transmembrane transporter activity	1.05E-02
28	GO:0043424: protein histidine kinase binding	1.05E-02
29	GO:0008408: 3'-5' exonuclease activity	1.13E-02
30	GO:0004674: protein serine/threonine kinase activity	1.16E-02
31	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.20E-02
32	GO:0016301: kinase activity	1.48E-02
33	GO:0010181: FMN binding	1.68E-02
34	GO:0019901: protein kinase binding	1.77E-02
35	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.85E-02
36	GO:0000156: phosphorelay response regulator activity	2.03E-02
37	GO:0008237: metallopeptidase activity	2.22E-02
38	GO:0042802: identical protein binding	2.32E-02
39	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.71E-02
40	GO:0008236: serine-type peptidase activity	2.81E-02
41	GO:0005096: GTPase activator activity	3.02E-02
42	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.12E-02
43	GO:0004222: metalloendopeptidase activity	3.12E-02
44	GO:0030145: manganese ion binding	3.23E-02
45	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.67E-02
46	GO:0005525: GTP binding	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0000791: euchromatin	1.88E-04
4	GO:0030870: Mre11 complex	4.24E-04
5	GO:0000795: synaptonemal complex	1.66E-03
6	GO:0009707: chloroplast outer membrane	3.36E-03
7	GO:0005875: microtubule associated complex	9.14E-03
8	GO:0000419: DNA-directed RNA polymerase V complex	9.14E-03
9	GO:0043234: protein complex	9.14E-03
10	GO:0009504: cell plate	1.77E-02
11	GO:0016592: mediator complex	1.94E-02
12	GO:0000785: chromatin	1.94E-02
13	GO:0046658: anchored component of plasma membrane	2.42E-02
14	GO:0009507: chloroplast	3.66E-02
15	GO:0090406: pollen tube	4.13E-02