Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G11380

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031222: arabinan catabolic process0.00E+00
2GO:0061157: mRNA destabilization0.00E+00
3GO:2000469: negative regulation of peroxidase activity0.00E+00
4GO:0010081: regulation of inflorescence meristem growth0.00E+00
5GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
6GO:0017038: protein import0.00E+00
7GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
8GO:1903224: regulation of endodermal cell differentiation0.00E+00
9GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
10GO:0080127: fruit septum development0.00E+00
11GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
12GO:0045184: establishment of protein localization0.00E+00
13GO:1905177: tracheary element differentiation0.00E+00
14GO:0046620: regulation of organ growth1.75E-06
15GO:0040008: regulation of growth2.47E-05
16GO:0000373: Group II intron splicing1.28E-04
17GO:1900865: chloroplast RNA modification1.65E-04
18GO:0009733: response to auxin3.76E-04
19GO:0016131: brassinosteroid metabolic process3.86E-04
20GO:0016554: cytidine to uridine editing5.37E-04
21GO:0030488: tRNA methylation7.09E-04
22GO:1902458: positive regulation of stomatal opening7.34E-04
23GO:0015904: tetracycline transport7.34E-04
24GO:2000905: negative regulation of starch metabolic process7.34E-04
25GO:0034757: negative regulation of iron ion transport7.34E-04
26GO:0000305: response to oxygen radical7.34E-04
27GO:0042659: regulation of cell fate specification7.34E-04
28GO:0006285: base-excision repair, AP site formation7.34E-04
29GO:0000025: maltose catabolic process7.34E-04
30GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process7.34E-04
31GO:0090558: plant epidermis development7.34E-04
32GO:0043266: regulation of potassium ion transport7.34E-04
33GO:0046520: sphingoid biosynthetic process7.34E-04
34GO:0010480: microsporocyte differentiation7.34E-04
35GO:0010080: regulation of floral meristem growth7.34E-04
36GO:2000021: regulation of ion homeostasis7.34E-04
37GO:0035987: endodermal cell differentiation7.34E-04
38GO:0051247: positive regulation of protein metabolic process7.34E-04
39GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.72E-04
40GO:2000070: regulation of response to water deprivation1.12E-03
41GO:0009734: auxin-activated signaling pathway1.33E-03
42GO:1903426: regulation of reactive oxygen species biosynthetic process1.58E-03
43GO:0006568: tryptophan metabolic process1.58E-03
44GO:2000123: positive regulation of stomatal complex development1.58E-03
45GO:0010024: phytochromobilin biosynthetic process1.58E-03
46GO:0048255: mRNA stabilization1.58E-03
47GO:1900871: chloroplast mRNA modification1.58E-03
48GO:0010271: regulation of chlorophyll catabolic process1.58E-03
49GO:0018026: peptidyl-lysine monomethylation1.58E-03
50GO:0071497: cellular response to freezing1.58E-03
51GO:1900033: negative regulation of trichome patterning1.58E-03
52GO:0080009: mRNA methylation1.58E-03
53GO:0009786: regulation of asymmetric cell division1.58E-03
54GO:0031648: protein destabilization1.58E-03
55GO:0010182: sugar mediated signaling pathway1.62E-03
56GO:0009646: response to absence of light1.78E-03
57GO:0009098: leucine biosynthetic process1.95E-03
58GO:0009641: shade avoidance2.28E-03
59GO:0032502: developmental process2.31E-03
60GO:0010583: response to cyclopentenone2.31E-03
61GO:0033591: response to L-ascorbic acid2.62E-03
62GO:0090708: specification of plant organ axis polarity2.62E-03
63GO:0080117: secondary growth2.62E-03
64GO:0048586: regulation of long-day photoperiodism, flowering2.62E-03
65GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion2.62E-03
66GO:0006788: heme oxidation2.62E-03
67GO:0010022: meristem determinacy2.62E-03
68GO:0010623: programmed cell death involved in cell development2.62E-03
69GO:0071398: cellular response to fatty acid2.62E-03
70GO:0010582: floral meristem determinacy3.03E-03
71GO:0009451: RNA modification3.14E-03
72GO:0009725: response to hormone3.45E-03
73GO:0006006: glucose metabolic process3.45E-03
74GO:0010029: regulation of seed germination3.67E-03
75GO:0010371: regulation of gibberellin biosynthetic process3.81E-03
76GO:0051513: regulation of monopolar cell growth3.81E-03
77GO:0051639: actin filament network formation3.81E-03
78GO:0034059: response to anoxia3.81E-03
79GO:0010306: rhamnogalacturonan II biosynthetic process3.81E-03
80GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.81E-03
81GO:1990019: protein storage vacuole organization3.81E-03
82GO:0090308: regulation of methylation-dependent chromatin silencing3.81E-03
83GO:0010109: regulation of photosynthesis5.15E-03
84GO:0051764: actin crosslink formation5.15E-03
85GO:0042274: ribosomal small subunit biogenesis5.15E-03
86GO:2000306: positive regulation of photomorphogenesis5.15E-03
87GO:0030104: water homeostasis5.15E-03
88GO:2000038: regulation of stomatal complex development5.15E-03
89GO:0010508: positive regulation of autophagy5.15E-03
90GO:0008295: spermidine biosynthetic process5.15E-03
91GO:0006749: glutathione metabolic process5.15E-03
92GO:0009755: hormone-mediated signaling pathway5.15E-03
93GO:1901141: regulation of lignin biosynthetic process5.15E-03
94GO:0048629: trichome patterning5.15E-03
95GO:0051017: actin filament bundle assembly5.43E-03
96GO:0009658: chloroplast organization6.52E-03
97GO:0010431: seed maturation6.60E-03
98GO:0016123: xanthophyll biosynthetic process6.62E-03
99GO:0010438: cellular response to sulfur starvation6.62E-03
100GO:0080110: sporopollenin biosynthetic process6.62E-03
101GO:0010375: stomatal complex patterning6.62E-03
102GO:0045038: protein import into chloroplast thylakoid membrane6.62E-03
103GO:0045487: gibberellin catabolic process6.62E-03
104GO:0048497: maintenance of floral organ identity6.62E-03
105GO:0009416: response to light stimulus6.70E-03
106GO:0071215: cellular response to abscisic acid stimulus7.91E-03
107GO:0009686: gibberellin biosynthetic process7.91E-03
108GO:0009959: negative gravitropism8.23E-03
109GO:0009913: epidermal cell differentiation8.23E-03
110GO:0010358: leaf shaping8.23E-03
111GO:1902456: regulation of stomatal opening8.23E-03
112GO:0042793: transcription from plastid promoter8.23E-03
113GO:0048831: regulation of shoot system development8.23E-03
114GO:0010190: cytochrome b6f complex assembly8.23E-03
115GO:0003006: developmental process involved in reproduction8.23E-03
116GO:0018258: protein O-linked glycosylation via hydroxyproline8.23E-03
117GO:0010405: arabinogalactan protein metabolic process8.23E-03
118GO:0009926: auxin polar transport9.04E-03
119GO:0009648: photoperiodism9.97E-03
120GO:2000067: regulation of root morphogenesis9.97E-03
121GO:0009082: branched-chain amino acid biosynthetic process9.97E-03
122GO:0006458: 'de novo' protein folding9.97E-03
123GO:0042026: protein refolding9.97E-03
124GO:0048509: regulation of meristem development9.97E-03
125GO:2000033: regulation of seed dormancy process9.97E-03
126GO:0031930: mitochondria-nucleus signaling pathway9.97E-03
127GO:0009099: valine biosynthetic process9.97E-03
128GO:0010087: phloem or xylem histogenesis1.01E-02
129GO:0009741: response to brassinosteroid1.09E-02
130GO:0010268: brassinosteroid homeostasis1.09E-02
131GO:0010161: red light signaling pathway1.18E-02
132GO:0006955: immune response1.18E-02
133GO:0010098: suspensor development1.18E-02
134GO:0048437: floral organ development1.18E-02
135GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.18E-02
136GO:0030307: positive regulation of cell growth1.18E-02
137GO:0045892: negative regulation of transcription, DNA-templated1.34E-02
138GO:0016132: brassinosteroid biosynthetic process1.35E-02
139GO:0000302: response to reactive oxygen species1.35E-02
140GO:0006402: mRNA catabolic process1.38E-02
141GO:0010439: regulation of glucosinolate biosynthetic process1.38E-02
142GO:0009819: drought recovery1.38E-02
143GO:0009690: cytokinin metabolic process1.38E-02
144GO:0006605: protein targeting1.38E-02
145GO:0009704: de-etiolation1.38E-02
146GO:0055075: potassium ion homeostasis1.38E-02
147GO:0000105: histidine biosynthetic process1.38E-02
148GO:1901657: glycosyl compound metabolic process1.54E-02
149GO:0010099: regulation of photomorphogenesis1.59E-02
150GO:0015996: chlorophyll catabolic process1.59E-02
151GO:0007186: G-protein coupled receptor signaling pathway1.59E-02
152GO:0010497: plasmodesmata-mediated intercellular transport1.59E-02
153GO:0009657: plastid organization1.59E-02
154GO:0009097: isoleucine biosynthetic process1.59E-02
155GO:0010100: negative regulation of photomorphogenesis1.59E-02
156GO:0010252: auxin homeostasis1.64E-02
157GO:0009828: plant-type cell wall loosening1.64E-02
158GO:0009051: pentose-phosphate shunt, oxidative branch1.80E-02
159GO:0051865: protein autoubiquitination1.80E-02
160GO:0006098: pentose-phosphate shunt1.80E-02
161GO:0048507: meristem development1.80E-02
162GO:0006783: heme biosynthetic process1.80E-02
163GO:0009056: catabolic process1.80E-02
164GO:0009740: gibberellic acid mediated signaling pathway1.93E-02
165GO:0010027: thylakoid membrane organization1.97E-02
166GO:0009638: phototropism2.03E-02
167GO:2000280: regulation of root development2.03E-02
168GO:0010018: far-red light signaling pathway2.03E-02
169GO:0031425: chloroplast RNA processing2.03E-02
170GO:0009826: unidimensional cell growth2.10E-02
171GO:0009742: brassinosteroid mediated signaling pathway2.24E-02
172GO:0016441: posttranscriptional gene silencing2.27E-02
173GO:0010162: seed dormancy process2.27E-02
174GO:0009299: mRNA transcription2.27E-02
175GO:0009870: defense response signaling pathway, resistance gene-dependent2.27E-02
176GO:0048829: root cap development2.27E-02
177GO:0010216: maintenance of DNA methylation2.52E-02
178GO:0010015: root morphogenesis2.52E-02
179GO:0009073: aromatic amino acid family biosynthetic process2.52E-02
180GO:0009773: photosynthetic electron transport in photosystem I2.52E-02
181GO:0009682: induced systemic resistance2.52E-02
182GO:0006415: translational termination2.52E-02
183GO:0048229: gametophyte development2.52E-02
184GO:0000160: phosphorelay signal transduction system2.70E-02
185GO:0005983: starch catabolic process2.77E-02
186GO:0010105: negative regulation of ethylene-activated signaling pathway2.77E-02
187GO:0045037: protein import into chloroplast stroma2.77E-02
188GO:0006351: transcription, DNA-templated2.78E-02
189GO:0048366: leaf development2.83E-02
190GO:0048527: lateral root development2.97E-02
191GO:0010075: regulation of meristem growth3.04E-02
192GO:0006094: gluconeogenesis3.04E-02
193GO:0009767: photosynthetic electron transport chain3.04E-02
194GO:0010588: cotyledon vascular tissue pattern formation3.04E-02
195GO:0010628: positive regulation of gene expression3.04E-02
196GO:0010102: lateral root morphogenesis3.04E-02
197GO:0009691: cytokinin biosynthetic process3.04E-02
198GO:2000028: regulation of photoperiodism, flowering3.04E-02
199GO:0009867: jasmonic acid mediated signaling pathway3.26E-02
200GO:0009934: regulation of meristem structural organization3.31E-02
201GO:0048467: gynoecium development3.31E-02
202GO:0010207: photosystem II assembly3.31E-02
203GO:0010030: positive regulation of seed germination3.59E-02
204GO:0006631: fatty acid metabolic process3.87E-02
205GO:0006071: glycerol metabolic process3.88E-02
206GO:0006833: water transport3.88E-02
207GO:0019762: glucosinolate catabolic process3.88E-02
208GO:0000162: tryptophan biosynthetic process3.88E-02
209GO:0042753: positive regulation of circadian rhythm3.88E-02
210GO:0080147: root hair cell development4.18E-02
211GO:0010187: negative regulation of seed germination4.18E-02
212GO:0005992: trehalose biosynthetic process4.18E-02
213GO:0051302: regulation of cell division4.48E-02
214GO:0019953: sexual reproduction4.48E-02
215GO:0009636: response to toxic substance4.71E-02
216GO:0048511: rhythmic process4.79E-02
217GO:0061077: chaperone-mediated protein folding4.79E-02
218GO:0016114: terpenoid biosynthetic process4.79E-02
219GO:0016998: cell wall macromolecule catabolic process4.79E-02
220GO:0006855: drug transmembrane transport4.88E-02
RankGO TermAdjusted P value
1GO:0071633: dihydroceramidase activity0.00E+00
2GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
3GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
4GO:0001872: (1->3)-beta-D-glucan binding1.53E-04
5GO:0010012: steroid 22-alpha hydroxylase activity7.34E-04
6GO:0000170: sphingosine hydroxylase activity7.34E-04
7GO:0050139: nicotinate-N-glucosyltransferase activity7.34E-04
8GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity7.34E-04
9GO:0005227: calcium activated cation channel activity7.34E-04
10GO:0004425: indole-3-glycerol-phosphate synthase activity7.34E-04
11GO:0042834: peptidoglycan binding7.34E-04
12GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity7.34E-04
13GO:0004134: 4-alpha-glucanotransferase activity7.34E-04
14GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity7.34E-04
15GO:0008395: steroid hydroxylase activity7.34E-04
16GO:0052381: tRNA dimethylallyltransferase activity7.34E-04
17GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity7.34E-04
18GO:0010313: phytochrome binding7.34E-04
19GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity7.34E-04
20GO:0003723: RNA binding1.48E-03
21GO:0045543: gibberellin 2-beta-dioxygenase activity1.58E-03
22GO:0043425: bHLH transcription factor binding1.58E-03
23GO:0010296: prenylcysteine methylesterase activity1.58E-03
24GO:0004766: spermidine synthase activity1.58E-03
25GO:0042284: sphingolipid delta-4 desaturase activity1.58E-03
26GO:0008493: tetracycline transporter activity1.58E-03
27GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.58E-03
28GO:0009884: cytokinin receptor activity1.58E-03
29GO:0017118: lipoyltransferase activity1.58E-03
30GO:0004362: glutathione-disulfide reductase activity1.58E-03
31GO:0003852: 2-isopropylmalate synthase activity1.58E-03
32GO:0004519: endonuclease activity2.30E-03
33GO:0015462: ATPase-coupled protein transmembrane transporter activity2.62E-03
34GO:0003906: DNA-(apurinic or apyrimidinic site) lyase activity2.62E-03
35GO:0005034: osmosensor activity2.62E-03
36GO:0052655: L-valine transaminase activity3.81E-03
37GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity3.81E-03
38GO:0016149: translation release factor activity, codon specific3.81E-03
39GO:0052656: L-isoleucine transaminase activity3.81E-03
40GO:0052654: L-leucine transaminase activity3.81E-03
41GO:0004345: glucose-6-phosphate dehydrogenase activity5.15E-03
42GO:0019104: DNA N-glycosylase activity5.15E-03
43GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed5.15E-03
44GO:0004084: branched-chain-amino-acid transaminase activity5.15E-03
45GO:0052793: pectin acetylesterase activity5.15E-03
46GO:0019199: transmembrane receptor protein kinase activity5.15E-03
47GO:0004392: heme oxygenase (decyclizing) activity5.15E-03
48GO:0046556: alpha-L-arabinofuranosidase activity5.15E-03
49GO:0016279: protein-lysine N-methyltransferase activity5.15E-03
50GO:0016614: oxidoreductase activity, acting on CH-OH group of donors5.79E-03
51GO:0005345: purine nucleobase transmembrane transporter activity6.00E-03
52GO:0070696: transmembrane receptor protein serine/threonine kinase binding6.62E-03
53GO:0080030: methyl indole-3-acetate esterase activity8.23E-03
54GO:1990714: hydroxyproline O-galactosyltransferase activity8.23E-03
55GO:0004332: fructose-bisphosphate aldolase activity8.23E-03
56GO:0004709: MAP kinase kinase kinase activity8.23E-03
57GO:0004130: cytochrome-c peroxidase activity8.23E-03
58GO:0016688: L-ascorbate peroxidase activity8.23E-03
59GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity9.97E-03
60GO:0016832: aldehyde-lyase activity9.97E-03
61GO:0019900: kinase binding9.97E-03
62GO:0050662: coenzyme binding1.18E-02
63GO:0016298: lipase activity1.39E-02
64GO:0051015: actin filament binding1.54E-02
65GO:0003724: RNA helicase activity1.59E-02
66GO:0008173: RNA methyltransferase activity1.59E-02
67GO:0016759: cellulose synthase activity1.64E-02
68GO:0008889: glycerophosphodiester phosphodiesterase activity1.80E-02
69GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.80E-02
70GO:0003747: translation release factor activity1.80E-02
71GO:0030234: enzyme regulator activity2.27E-02
72GO:0015020: glucuronosyltransferase activity2.27E-02
73GO:0004673: protein histidine kinase activity2.27E-02
74GO:0004805: trehalose-phosphatase activity2.27E-02
75GO:0102483: scopolin beta-glucosidase activity2.32E-02
76GO:0030247: polysaccharide binding2.32E-02
77GO:0044183: protein binding involved in protein folding2.52E-02
78GO:0015238: drug transmembrane transporter activity2.70E-02
79GO:0000976: transcription regulatory region sequence-specific DNA binding2.77E-02
80GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.85E-02
81GO:0000155: phosphorelay sensor kinase activity3.04E-02
82GO:0031072: heat shock protein binding3.04E-02
83GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.12E-02
84GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.26E-02
85GO:0008266: poly(U) RNA binding3.31E-02
86GO:0052689: carboxylic ester hydrolase activity3.53E-02
87GO:0008422: beta-glucosidase activity3.56E-02
88GO:0003712: transcription cofactor activity3.59E-02
89GO:0008146: sulfotransferase activity3.59E-02
90GO:0050661: NADP binding3.71E-02
91GO:0003700: transcription factor activity, sequence-specific DNA binding3.72E-02
92GO:0031418: L-ascorbic acid binding4.18E-02
93GO:0005528: FK506 binding4.18E-02
94GO:0051536: iron-sulfur cluster binding4.18E-02
95GO:0004871: signal transducer activity4.24E-02
96GO:0043424: protein histidine kinase binding4.48E-02
97GO:0043621: protein self-association4.54E-02
98GO:0035091: phosphatidylinositol binding4.54E-02
99GO:0010333: terpene synthase activity4.79E-02
100GO:0004176: ATP-dependent peptidase activity4.79E-02
101GO:0033612: receptor serine/threonine kinase binding4.79E-02
102GO:0003964: RNA-directed DNA polymerase activity4.79E-02
RankGO TermAdjusted P value
1GO:0000408: EKC/KEOPS complex0.00E+00
2GO:0009507: chloroplast8.33E-04
3GO:0000427: plastid-encoded plastid RNA polymerase complex1.58E-03
4GO:0010494: cytoplasmic stress granule1.64E-03
5GO:0009528: plastid inner membrane2.62E-03
6GO:0030139: endocytic vesicle2.62E-03
7GO:0005578: proteinaceous extracellular matrix3.45E-03
8GO:0032585: multivesicular body membrane3.81E-03
9GO:0032432: actin filament bundle3.81E-03
10GO:0009527: plastid outer membrane5.15E-03
11GO:0009544: chloroplast ATP synthase complex5.15E-03
12GO:0009654: photosystem II oxygen evolving complex6.00E-03
13GO:0015629: actin cytoskeleton7.91E-03
14GO:0009986: cell surface1.18E-02
15GO:0019898: extrinsic component of membrane1.26E-02
16GO:0009501: amyloplast1.38E-02
17GO:0048226: Casparian strip1.38E-02
18GO:0010319: stromule1.75E-02
19GO:0046658: anchored component of plasma membrane1.76E-02
20GO:0042644: chloroplast nucleoid1.80E-02
21GO:0005720: nuclear heterochromatin1.80E-02
22GO:0030529: intracellular ribonucleoprotein complex1.97E-02
23GO:0005884: actin filament2.52E-02
24GO:0009534: chloroplast thylakoid2.65E-02
25GO:0009508: plastid chromosome3.04E-02
26GO:0030095: chloroplast photosystem II3.31E-02
27GO:0009570: chloroplast stroma4.02E-02
28GO:0031225: anchored component of membrane4.24E-02
29GO:0042651: thylakoid membrane4.48E-02
30GO:0009532: plastid stroma4.79E-02
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Gene type



Gene DE type