co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G11070

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0031222: arabinan catabolic process	0.00E+00
4	GO:0000819: sister chromatid segregation	0.00E+00
5	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
6	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
7	GO:0048497: maintenance of floral organ identity	1.11E-04
8	GO:0010480: microsporocyte differentiation	3.34E-04
9	GO:0015904: tetracycline transport	3.34E-04
10	GO:0006438: valyl-tRNA aminoacylation	3.34E-04
11	GO:0046520: sphingoid biosynthetic process	3.34E-04
12	GO:0070509: calcium ion import	3.34E-04
13	GO:0018026: peptidyl-lysine monomethylation	7.29E-04
14	GO:0071497: cellular response to freezing	7.29E-04
15	GO:0009308: amine metabolic process	7.29E-04
16	GO:0009786: regulation of asymmetric cell division	7.29E-04
17	GO:2000123: positive regulation of stomatal complex development	7.29E-04
18	GO:1901529: positive regulation of anion channel activity	7.29E-04
19	GO:0030048: actin filament-based movement	1.07E-03
20	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	1.18E-03
21	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.23E-03
22	GO:0010321: regulation of vegetative phase change	1.70E-03
23	GO:0010371: regulation of gibberellin biosynthetic process	1.70E-03
24	GO:0009647: skotomorphogenesis	1.70E-03
25	GO:0009640: photomorphogenesis	1.98E-03
26	GO:0016042: lipid catabolic process	2.19E-03
27	GO:2000038: regulation of stomatal complex development	2.28E-03
28	GO:0006808: regulation of nitrogen utilization	2.28E-03
29	GO:1901141: regulation of lignin biosynthetic process	2.28E-03
30	GO:0010375: stomatal complex patterning	2.91E-03
31	GO:0009741: response to brassinosteroid	3.30E-03
32	GO:0010405: arabinogalactan protein metabolic process	3.60E-03
33	GO:0010358: leaf shaping	3.60E-03
34	GO:0016554: cytidine to uridine editing	3.60E-03
35	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.60E-03
36	GO:0009913: epidermal cell differentiation	3.60E-03
37	GO:1902456: regulation of stomatal opening	3.60E-03
38	GO:0042793: transcription from plastid promoter	3.60E-03
39	GO:0006468: protein phosphorylation	3.61E-03
40	GO:0030488: tRNA methylation	4.33E-03
41	GO:2000033: regulation of seed dormancy process	4.33E-03
42	GO:0032502: developmental process	4.35E-03
43	GO:0000712: resolution of meiotic recombination intermediates	5.11E-03
44	GO:0006351: transcription, DNA-templated	5.11E-03
45	GO:0048528: post-embryonic root development	5.11E-03
46	GO:1900056: negative regulation of leaf senescence	5.11E-03
47	GO:0048437: floral organ development	5.11E-03
48	GO:0000910: cytokinesis	5.57E-03
49	GO:0009690: cytokinin metabolic process	5.94E-03
50	GO:0000105: histidine biosynthetic process	5.94E-03
51	GO:0001522: pseudouridine synthesis	5.94E-03
52	GO:0010497: plasmodesmata-mediated intercellular transport	6.81E-03
53	GO:0000373: Group II intron splicing	7.73E-03
54	GO:0009056: catabolic process	7.73E-03
55	GO:0000160: phosphorelay signal transduction system	8.09E-03
56	GO:0040008: regulation of growth	8.58E-03
57	GO:1900865: chloroplast RNA modification	8.68E-03
58	GO:0048829: root cap development	9.69E-03
59	GO:0009641: shade avoidance	9.69E-03
60	GO:0016441: posttranscriptional gene silencing	9.69E-03
61	GO:0006949: syncytium formation	9.69E-03
62	GO:0006259: DNA metabolic process	9.69E-03
63	GO:0010162: seed dormancy process	9.69E-03
64	GO:0009073: aromatic amino acid family biosynthetic process	1.07E-02
65	GO:0048229: gametophyte development	1.07E-02
66	GO:0006265: DNA topological change	1.07E-02
67	GO:0007166: cell surface receptor signaling pathway	1.08E-02
68	GO:0006631: fatty acid metabolic process	1.16E-02
69	GO:0000266: mitochondrial fission	1.18E-02
70	GO:0006312: mitotic recombination	1.18E-02
71	GO:0012501: programmed cell death	1.18E-02
72	GO:0010075: regulation of meristem growth	1.29E-02
73	GO:0009767: photosynthetic electron transport chain	1.29E-02
74	GO:0010588: cotyledon vascular tissue pattern formation	1.29E-02
75	GO:0010102: lateral root morphogenesis	1.29E-02
76	GO:0009691: cytokinin biosynthetic process	1.29E-02
77	GO:0009793: embryo development ending in seed dormancy	1.39E-02
78	GO:0009934: regulation of meristem structural organization	1.41E-02
79	GO:0006302: double-strand break repair	1.41E-02
80	GO:0009826: unidimensional cell growth	1.51E-02
81	GO:0070588: calcium ion transmembrane transport	1.53E-02
82	GO:0006071: glycerol metabolic process	1.65E-02
83	GO:0000162: tryptophan biosynthetic process	1.65E-02
84	GO:0009736: cytokinin-activated signaling pathway	1.71E-02
85	GO:0019953: sexual reproduction	1.90E-02
86	GO:0006418: tRNA aminoacylation for protein translation	1.90E-02
87	GO:0010431: seed maturation	2.03E-02
88	GO:0048278: vesicle docking	2.03E-02
89	GO:0051321: meiotic cell cycle	2.03E-02
90	GO:0048367: shoot system development	2.09E-02
91	GO:0010082: regulation of root meristem growth	2.31E-02
92	GO:0010091: trichome branching	2.45E-02
93	GO:0006508: proteolysis	2.51E-02
94	GO:0009742: brassinosteroid mediated signaling pathway	2.58E-02
95	GO:0045892: negative regulation of transcription, DNA-templated	2.66E-02
96	GO:0080022: primary root development	2.74E-02
97	GO:0008033: tRNA processing	2.74E-02
98	GO:0010501: RNA secondary structure unwinding	2.74E-02
99	GO:0010087: phloem or xylem histogenesis	2.74E-02
100	GO:0010118: stomatal movement	2.74E-02
101	GO:0048653: anther development	2.74E-02
102	GO:0010182: sugar mediated signaling pathway	2.89E-02
103	GO:0010268: brassinosteroid homeostasis	2.89E-02
104	GO:0010305: leaf vascular tissue pattern formation	2.89E-02
105	GO:0009958: positive gravitropism	2.89E-02
106	GO:0007018: microtubule-based movement	3.05E-02
107	GO:0061025: membrane fusion	3.05E-02
108	GO:0007059: chromosome segregation	3.05E-02
109	GO:0048825: cotyledon development	3.20E-02
110	GO:0009058: biosynthetic process	3.21E-02
111	GO:0016132: brassinosteroid biosynthetic process	3.36E-02
112	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.36E-02
113	GO:0071554: cell wall organization or biogenesis	3.36E-02
114	GO:0016032: viral process	3.52E-02
115	GO:0010583: response to cyclopentenone	3.52E-02
116	GO:0031047: gene silencing by RNA	3.52E-02
117	GO:1901657: glycosyl compound metabolic process	3.69E-02
118	GO:0030163: protein catabolic process	3.69E-02
119	GO:0009828: plant-type cell wall loosening	3.85E-02
120	GO:0016125: sterol metabolic process	3.85E-02
121	GO:0007267: cell-cell signaling	4.02E-02
122	GO:0051607: defense response to virus	4.19E-02
123	GO:0005975: carbohydrate metabolic process	4.27E-02
124	GO:0010027: thylakoid membrane organization	4.37E-02
125	GO:0016126: sterol biosynthetic process	4.37E-02
126	GO:0006355: regulation of transcription, DNA-templated	4.56E-02
127	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.68E-02
128	GO:0006906: vesicle fusion	4.72E-02
129	GO:0048573: photoperiodism, flowering	4.90E-02
130	GO:0015995: chlorophyll biosynthetic process	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
2	GO:0047661: amino-acid racemase activity	0.00E+00
3	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
4	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
5	GO:0071633: dihydroceramidase activity	0.00E+00
6	GO:0009374: biotin binding	3.34E-04
7	GO:0004832: valine-tRNA ligase activity	3.34E-04
8	GO:0010012: steroid 22-alpha hydroxylase activity	3.34E-04
9	GO:0000170: sphingosine hydroxylase activity	3.34E-04
10	GO:0052381: tRNA dimethylallyltransferase activity	3.34E-04
11	GO:0010296: prenylcysteine methylesterase activity	7.29E-04
12	GO:0042284: sphingolipid delta-4 desaturase activity	7.29E-04
13	GO:0008493: tetracycline transporter activity	7.29E-04
14	GO:0016630: protochlorophyllide reductase activity	7.29E-04
15	GO:0070330: aromatase activity	1.18E-03
16	GO:0017150: tRNA dihydrouridine synthase activity	1.18E-03
17	GO:0003774: motor activity	1.21E-03
18	GO:0052689: carboxylic ester hydrolase activity	1.38E-03
19	GO:0001872: (1->3)-beta-D-glucan binding	1.70E-03
20	GO:0003916: DNA topoisomerase activity	1.70E-03
21	GO:0004176: ATP-dependent peptidase activity	2.02E-03
22	GO:0004674: protein serine/threonine kinase activity	2.23E-03
23	GO:0046556: alpha-L-arabinofuranosidase activity	2.28E-03
24	GO:0016279: protein-lysine N-methyltransferase activity	2.28E-03
25	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.28E-03
26	GO:0019199: transmembrane receptor protein kinase activity	2.28E-03
27	GO:0018685: alkane 1-monooxygenase activity	2.91E-03
28	GO:0003989: acetyl-CoA carboxylase activity	2.91E-03
29	GO:0016298: lipase activity	3.02E-03
30	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.60E-03
31	GO:0016788: hydrolase activity, acting on ester bonds	3.73E-03
32	GO:0004650: polygalacturonase activity	4.04E-03
33	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	4.33E-03
34	GO:0016832: aldehyde-lyase activity	4.33E-03
35	GO:0000156: phosphorelay response regulator activity	4.64E-03
36	GO:0008237: metallopeptidase activity	5.25E-03
37	GO:0005524: ATP binding	5.64E-03
38	GO:0008173: RNA methyltransferase activity	6.81E-03
39	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	6.81E-03
40	GO:0003724: RNA helicase activity	6.81E-03
41	GO:0004722: protein serine/threonine phosphatase activity	7.60E-03
42	GO:0008889: glycerophosphodiester phosphodiesterase activity	7.73E-03
43	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.32E-03
44	GO:0004222: metalloendopeptidase activity	8.49E-03
45	GO:0008017: microtubule binding	9.65E-03
46	GO:0003697: single-stranded DNA binding	9.77E-03
47	GO:0005262: calcium channel activity	1.29E-02
48	GO:0009982: pseudouridine synthase activity	1.29E-02
49	GO:0008131: primary amine oxidase activity	1.41E-02
50	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.41E-02
51	GO:0008289: lipid binding	1.50E-02
52	GO:0004190: aspartic-type endopeptidase activity	1.53E-02
53	GO:0003712: transcription cofactor activity	1.53E-02
54	GO:0016887: ATPase activity	1.76E-02
55	GO:0016301: kinase activity	1.80E-02
56	GO:0003723: RNA binding	1.84E-02
57	GO:0003777: microtubule motor activity	1.89E-02
58	GO:0033612: receptor serine/threonine kinase binding	2.03E-02
59	GO:0008408: 3'-5' exonuclease activity	2.03E-02
60	GO:0008094: DNA-dependent ATPase activity	2.03E-02
61	GO:0030570: pectate lyase activity	2.31E-02
62	GO:0003779: actin binding	2.36E-02
63	GO:0003727: single-stranded RNA binding	2.45E-02
64	GO:0008026: ATP-dependent helicase activity	2.58E-02
65	GO:0004812: aminoacyl-tRNA ligase activity	2.60E-02
66	GO:0042803: protein homodimerization activity	2.77E-02
67	GO:0004871: signal transducer activity	2.77E-02
68	GO:0019901: protein kinase binding	3.20E-02
69	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.24E-02
70	GO:0048038: quinone binding	3.36E-02
71	GO:0004518: nuclease activity	3.52E-02
72	GO:0051015: actin filament binding	3.69E-02
73	GO:0009055: electron carrier activity	3.70E-02
74	GO:0004519: endonuclease activity	3.76E-02
75	GO:0016791: phosphatase activity	3.85E-02
76	GO:0005200: structural constituent of cytoskeleton	4.02E-02
77	GO:0016413: O-acetyltransferase activity	4.19E-02
78	GO:0004721: phosphoprotein phosphatase activity	4.90E-02
79	GO:0004004: ATP-dependent RNA helicase activity	4.90E-02
80	GO:0102483: scopolin beta-glucosidase activity	4.90E-02
81	GO:0030247: polysaccharide binding	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0000791: euchromatin	3.34E-04
3	GO:0016459: myosin complex	7.22E-04
4	GO:0030870: Mre11 complex	7.29E-04
5	GO:0000427: plastid-encoded plastid RNA polymerase complex	7.29E-04
6	GO:0030139: endocytic vesicle	1.18E-03
7	GO:0009317: acetyl-CoA carboxylase complex	1.18E-03
8	GO:0032585: multivesicular body membrane	1.70E-03
9	GO:0009544: chloroplast ATP synthase complex	2.28E-03
10	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	2.28E-03
11	GO:0046658: anchored component of plasma membrane	2.85E-03
12	GO:0000795: synaptonemal complex	2.91E-03
13	GO:0005886: plasma membrane	3.50E-03
14	GO:0000793: condensed chromosome	3.60E-03
15	GO:0009986: cell surface	5.11E-03
16	GO:0000794: condensed nuclear chromosome	5.11E-03
17	GO:0005576: extracellular region	6.95E-03
18	GO:0010494: cytoplasmic stress granule	7.73E-03
19	GO:0000418: DNA-directed RNA polymerase IV complex	9.69E-03
20	GO:0005884: actin filament	1.07E-02
21	GO:0009508: plastid chromosome	1.29E-02
22	GO:0005578: proteinaceous extracellular matrix	1.29E-02
23	GO:0031225: anchored component of membrane	1.37E-02
24	GO:0009654: photosystem II oxygen evolving complex	1.90E-02
25	GO:0015629: actin cytoskeleton	2.31E-02
26	GO:0005871: kinesin complex	2.60E-02
27	GO:0019898: extrinsic component of membrane	3.20E-02
28	GO:0000785: chromatin	3.52E-02
29	GO:0009295: nucleoid	4.02E-02