Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G10410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0097237: cellular response to toxic substance0.00E+00
2GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
3GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
4GO:0010793: regulation of mRNA export from nucleus0.00E+00
5GO:0051553: flavone biosynthetic process0.00E+00
6GO:0018063: cytochrome c-heme linkage0.00E+00
7GO:0010055: atrichoblast differentiation0.00E+00
8GO:1902001: fatty acid transmembrane transport0.00E+00
9GO:0009617: response to bacterium1.34E-06
10GO:1900057: positive regulation of leaf senescence8.89E-06
11GO:0042742: defense response to bacterium1.62E-05
12GO:0010112: regulation of systemic acquired resistance2.63E-05
13GO:0001676: long-chain fatty acid metabolic process4.74E-05
14GO:0009636: response to toxic substance5.37E-05
15GO:0009620: response to fungus1.40E-04
16GO:0010311: lateral root formation1.80E-04
17GO:0009611: response to wounding1.82E-04
18GO:0009759: indole glucosinolate biosynthetic process1.88E-04
19GO:0009407: toxin catabolic process1.96E-04
20GO:0050832: defense response to fungus2.86E-04
21GO:1900056: negative regulation of leaf senescence3.30E-04
22GO:0080173: male-female gamete recognition during double fertilization3.70E-04
23GO:0010482: regulation of epidermal cell division3.70E-04
24GO:0046467: membrane lipid biosynthetic process3.70E-04
25GO:0033306: phytol metabolic process3.70E-04
26GO:0009700: indole phytoalexin biosynthetic process3.70E-04
27GO:0006680: glucosylceramide catabolic process3.70E-04
28GO:0010230: alternative respiration3.70E-04
29GO:1900384: regulation of flavonol biosynthetic process3.70E-04
30GO:0034214: protein hexamerization3.70E-04
31GO:1990542: mitochondrial transmembrane transport3.70E-04
32GO:0090421: embryonic meristem initiation3.70E-04
33GO:0032107: regulation of response to nutrient levels3.70E-04
34GO:0010120: camalexin biosynthetic process5.06E-04
35GO:0006623: protein targeting to vacuole5.31E-04
36GO:0015031: protein transport6.06E-04
37GO:0009835: fruit ripening6.07E-04
38GO:0009751: response to salicylic acid7.51E-04
39GO:0019521: D-gluconate metabolic process8.05E-04
40GO:0000719: photoreactive repair8.05E-04
41GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex8.05E-04
42GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine8.05E-04
43GO:0015908: fatty acid transport8.05E-04
44GO:0019725: cellular homeostasis8.05E-04
45GO:0071497: cellular response to freezing8.05E-04
46GO:0071668: plant-type cell wall assembly8.05E-04
47GO:0080151: positive regulation of salicylic acid mediated signaling pathway8.05E-04
48GO:0009838: abscission8.05E-04
49GO:0055088: lipid homeostasis8.05E-04
50GO:0050684: regulation of mRNA processing8.05E-04
51GO:0051607: defense response to virus8.60E-04
52GO:0006979: response to oxidative stress1.05E-03
53GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.30E-03
54GO:0032784: regulation of DNA-templated transcription, elongation1.30E-03
55GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.30E-03
56GO:0002230: positive regulation of defense response to virus by host1.30E-03
57GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.30E-03
58GO:0080163: regulation of protein serine/threonine phosphatase activity1.30E-03
59GO:0071398: cellular response to fatty acid1.30E-03
60GO:0010186: positive regulation of cellular defense response1.30E-03
61GO:0010366: negative regulation of ethylene biosynthetic process1.30E-03
62GO:0010476: gibberellin mediated signaling pathway1.30E-03
63GO:0010325: raffinose family oligosaccharide biosynthetic process1.30E-03
64GO:0000162: tryptophan biosynthetic process1.74E-03
65GO:1902290: positive regulation of defense response to oomycetes1.88E-03
66GO:0080024: indolebutyric acid metabolic process1.88E-03
67GO:0010116: positive regulation of abscisic acid biosynthetic process1.88E-03
68GO:0006020: inositol metabolic process1.88E-03
69GO:0070301: cellular response to hydrogen peroxide1.88E-03
70GO:0002239: response to oomycetes1.88E-03
71GO:0006952: defense response2.10E-03
72GO:0040008: regulation of growth2.19E-03
73GO:0016998: cell wall macromolecule catabolic process2.35E-03
74GO:0051707: response to other organism2.40E-03
75GO:1901002: positive regulation of response to salt stress2.52E-03
76GO:0006621: protein retention in ER lumen2.52E-03
77GO:0010600: regulation of auxin biosynthetic process2.52E-03
78GO:0051567: histone H3-K9 methylation2.52E-03
79GO:0010188: response to microbial phytotoxin2.52E-03
80GO:0015867: ATP transport2.52E-03
81GO:0060548: negative regulation of cell death2.52E-03
82GO:0009939: positive regulation of gibberellic acid mediated signaling pathway2.52E-03
83GO:0048830: adventitious root development2.52E-03
84GO:0009693: ethylene biosynthetic process2.80E-03
85GO:0006012: galactose metabolic process2.80E-03
86GO:0031347: regulation of defense response3.06E-03
87GO:0009164: nucleoside catabolic process3.23E-03
88GO:0046283: anthocyanin-containing compound metabolic process3.23E-03
89GO:0031365: N-terminal protein amino acid modification3.23E-03
90GO:0009753: response to jasmonic acid3.42E-03
91GO:0042391: regulation of membrane potential3.57E-03
92GO:0002238: response to molecule of fungal origin3.99E-03
93GO:0009643: photosynthetic acclimation3.99E-03
94GO:0015866: ADP transport3.99E-03
95GO:0006777: Mo-molybdopterin cofactor biosynthetic process3.99E-03
96GO:0010256: endomembrane system organization3.99E-03
97GO:0006891: intra-Golgi vesicle-mediated transport4.74E-03
98GO:0006635: fatty acid beta-oxidation4.74E-03
99GO:0048444: floral organ morphogenesis4.81E-03
100GO:0080186: developmental vegetative growth5.68E-03
101GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.68E-03
102GO:0050829: defense response to Gram-negative bacterium5.68E-03
103GO:1902074: response to salt5.68E-03
104GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.68E-03
105GO:0030091: protein repair6.61E-03
106GO:0043068: positive regulation of programmed cell death6.61E-03
107GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.61E-03
108GO:0006605: protein targeting6.61E-03
109GO:0006102: isocitrate metabolic process6.61E-03
110GO:0010200: response to chitin6.68E-03
111GO:0009651: response to salt stress7.32E-03
112GO:0009880: embryonic pattern specification7.58E-03
113GO:0006997: nucleus organization7.58E-03
114GO:0010497: plasmodesmata-mediated intercellular transport7.58E-03
115GO:0010204: defense response signaling pathway, resistance gene-independent7.58E-03
116GO:0017004: cytochrome complex assembly7.58E-03
117GO:0010208: pollen wall assembly7.58E-03
118GO:0009627: systemic acquired resistance7.68E-03
119GO:0051865: protein autoubiquitination8.60E-03
120GO:0006098: pentose-phosphate shunt8.60E-03
121GO:0019432: triglyceride biosynthetic process8.60E-03
122GO:0009056: catabolic process8.60E-03
123GO:0001708: cell fate specification8.60E-03
124GO:0046685: response to arsenic-containing substance8.60E-03
125GO:0055114: oxidation-reduction process9.36E-03
126GO:0009813: flavonoid biosynthetic process9.44E-03
127GO:0090332: stomatal closure9.67E-03
128GO:2000280: regulation of root development9.67E-03
129GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.67E-03
130GO:1900426: positive regulation of defense response to bacterium9.67E-03
131GO:0009638: phototropism9.67E-03
132GO:0048527: lateral root development1.04E-02
133GO:0009870: defense response signaling pathway, resistance gene-dependent1.08E-02
134GO:0006032: chitin catabolic process1.08E-02
135GO:0019538: protein metabolic process1.08E-02
136GO:0009688: abscisic acid biosynthetic process1.08E-02
137GO:0009641: shade avoidance1.08E-02
138GO:0010150: leaf senescence1.11E-02
139GO:0009682: induced systemic resistance1.19E-02
140GO:0034599: cellular response to oxidative stress1.19E-02
141GO:1903507: negative regulation of nucleic acid-templated transcription1.19E-02
142GO:0052544: defense response by callose deposition in cell wall1.19E-02
143GO:0048765: root hair cell differentiation1.19E-02
144GO:0009684: indoleacetic acid biosynthetic process1.19E-02
145GO:0006099: tricarboxylic acid cycle1.19E-02
146GO:0007166: cell surface receptor signaling pathway1.31E-02
147GO:0002213: defense response to insect1.32E-02
148GO:0045037: protein import into chloroplast stroma1.32E-02
149GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.32E-02
150GO:0071365: cellular response to auxin stimulus1.32E-02
151GO:0012501: programmed cell death1.32E-02
152GO:0008152: metabolic process1.33E-02
153GO:0006631: fatty acid metabolic process1.36E-02
154GO:0030048: actin filament-based movement1.44E-02
155GO:0009785: blue light signaling pathway1.44E-02
156GO:2000028: regulation of photoperiodism, flowering1.44E-02
157GO:0002237: response to molecule of bacterial origin1.57E-02
158GO:0042343: indole glucosinolate metabolic process1.70E-02
159GO:0090351: seedling development1.70E-02
160GO:0009225: nucleotide-sugar metabolic process1.70E-02
161GO:0009409: response to cold1.72E-02
162GO:0006812: cation transport1.85E-02
163GO:0009734: auxin-activated signaling pathway1.92E-02
164GO:0080147: root hair cell development1.98E-02
165GO:0006813: potassium ion transport1.99E-02
166GO:0006970: response to osmotic stress2.12E-02
167GO:0006874: cellular calcium ion homeostasis2.12E-02
168GO:0009695: jasmonic acid biosynthetic process2.12E-02
169GO:0010026: trichome differentiation2.12E-02
170GO:0043622: cortical microtubule organization2.12E-02
171GO:0051302: regulation of cell division2.12E-02
172GO:0005975: carbohydrate metabolic process2.14E-02
173GO:0046686: response to cadmium ion2.25E-02
174GO:0009269: response to desiccation2.27E-02
175GO:0098542: defense response to other organism2.27E-02
176GO:0009723: response to ethylene2.32E-02
177GO:0016226: iron-sulfur cluster assembly2.42E-02
178GO:2000022: regulation of jasmonic acid mediated signaling pathway2.42E-02
179GO:0071456: cellular response to hypoxia2.42E-02
180GO:0009411: response to UV2.58E-02
181GO:0009625: response to insect2.58E-02
182GO:0042147: retrograde transport, endosome to Golgi2.90E-02
183GO:0000413: protein peptidyl-prolyl isomerization3.06E-02
184GO:0010118: stomatal movement3.06E-02
185GO:0006885: regulation of pH3.23E-02
186GO:0006520: cellular amino acid metabolic process3.23E-02
187GO:0006662: glycerol ether metabolic process3.23E-02
188GO:0010182: sugar mediated signaling pathway3.23E-02
189GO:0048868: pollen tube development3.23E-02
190GO:0046323: glucose import3.23E-02
191GO:0006886: intracellular protein transport3.29E-02
192GO:0045893: positive regulation of transcription, DNA-templated3.31E-02
193GO:0006814: sodium ion transport3.40E-02
194GO:0006508: proteolysis3.42E-02
195GO:0009851: auxin biosynthetic process3.57E-02
196GO:0000302: response to reactive oxygen species3.75E-02
197GO:0071554: cell wall organization or biogenesis3.75E-02
198GO:0002229: defense response to oomycetes3.75E-02
199GO:0010193: response to ozone3.75E-02
200GO:0009630: gravitropism3.93E-02
201GO:0009737: response to abscisic acid4.01E-02
202GO:0006629: lipid metabolic process4.09E-02
203GO:0009408: response to heat4.09E-02
204GO:0019760: glucosinolate metabolic process4.30E-02
205GO:0009615: response to virus4.87E-02
RankGO TermAdjusted P value
1GO:0051670: inulinase activity0.00E+00
2GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
3GO:0015591: D-ribose transmembrane transporter activity0.00E+00
4GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
5GO:0015148: D-xylose transmembrane transporter activity0.00E+00
6GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
7GO:2001147: camalexin binding0.00E+00
8GO:0015575: mannitol transmembrane transporter activity0.00E+00
9GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
10GO:0015576: sorbitol transmembrane transporter activity0.00E+00
11GO:0033759: flavone synthase activity0.00E+00
12GO:2001227: quercitrin binding0.00E+00
13GO:0102391: decanoate--CoA ligase activity2.54E-04
14GO:0043295: glutathione binding3.30E-04
15GO:0004467: long-chain fatty acid-CoA ligase activity3.30E-04
16GO:0004364: glutathione transferase activity3.52E-04
17GO:0070401: NADP+ binding3.70E-04
18GO:0051669: fructan beta-fructosidase activity3.70E-04
19GO:0004348: glucosylceramidase activity3.70E-04
20GO:0047940: glucuronokinase activity3.70E-04
21GO:0031219: levanase activity3.70E-04
22GO:0015168: glycerol transmembrane transporter activity3.70E-04
23GO:0009000: selenocysteine lyase activity3.70E-04
24GO:0015245: fatty acid transporter activity3.70E-04
25GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.70E-04
26GO:0004649: poly(ADP-ribose) glycohydrolase activity3.70E-04
27GO:0090353: polygalacturonase inhibitor activity3.70E-04
28GO:0016229: steroid dehydrogenase activity3.70E-04
29GO:0010179: IAA-Ala conjugate hydrolase activity3.70E-04
30GO:0004033: aldo-keto reductase (NADP) activity4.14E-04
31GO:0050736: O-malonyltransferase activity8.05E-04
32GO:0010331: gibberellin binding8.05E-04
33GO:0004806: triglyceride lipase activity1.13E-03
34GO:0043169: cation binding1.30E-03
35GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.30E-03
36GO:0032403: protein complex binding1.30E-03
37GO:0004049: anthranilate synthase activity1.30E-03
38GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.30E-03
39GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.30E-03
40GO:0030552: cAMP binding1.57E-03
41GO:0030553: cGMP binding1.57E-03
42GO:0035529: NADH pyrophosphatase activity1.88E-03
43GO:0005354: galactose transmembrane transporter activity1.88E-03
44GO:0010178: IAA-amino acid conjugate hydrolase activity1.88E-03
45GO:0004449: isocitrate dehydrogenase (NAD+) activity1.88E-03
46GO:0005432: calcium:sodium antiporter activity1.88E-03
47GO:0008106: alcohol dehydrogenase (NADP+) activity1.88E-03
48GO:0017077: oxidative phosphorylation uncoupler activity1.88E-03
49GO:0005216: ion channel activity2.13E-03
50GO:0046923: ER retention sequence binding2.52E-03
51GO:0003995: acyl-CoA dehydrogenase activity2.52E-03
52GO:0050378: UDP-glucuronate 4-epimerase activity2.52E-03
53GO:0009916: alternative oxidase activity2.52E-03
54GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.52E-03
55GO:0004499: N,N-dimethylaniline monooxygenase activity3.04E-03
56GO:0015145: monosaccharide transmembrane transporter activity3.23E-03
57GO:0018685: alkane 1-monooxygenase activity3.23E-03
58GO:0016773: phosphotransferase activity, alcohol group as acceptor3.23E-03
59GO:0003997: acyl-CoA oxidase activity3.23E-03
60GO:0047631: ADP-ribose diphosphatase activity3.23E-03
61GO:0030151: molybdenum ion binding3.23E-03
62GO:0030551: cyclic nucleotide binding3.57E-03
63GO:0005249: voltage-gated potassium channel activity3.57E-03
64GO:0000210: NAD+ diphosphatase activity3.99E-03
65GO:0008200: ion channel inhibitor activity3.99E-03
66GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.81E-03
67GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.81E-03
68GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides4.81E-03
69GO:0004144: diacylglycerol O-acyltransferase activity4.81E-03
70GO:0005347: ATP transmembrane transporter activity4.81E-03
71GO:0004656: procollagen-proline 4-dioxygenase activity4.81E-03
72GO:0003978: UDP-glucose 4-epimerase activity4.81E-03
73GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.81E-03
74GO:0015217: ADP transmembrane transporter activity4.81E-03
75GO:0051920: peroxiredoxin activity4.81E-03
76GO:0046872: metal ion binding5.50E-03
77GO:0008320: protein transmembrane transporter activity5.68E-03
78GO:0008235: metalloexopeptidase activity5.68E-03
79GO:0008237: metallopeptidase activity6.11E-03
80GO:0004034: aldose 1-epimerase activity6.61E-03
81GO:0005544: calcium-dependent phospholipid binding6.61E-03
82GO:0015491: cation:cation antiporter activity6.61E-03
83GO:0016209: antioxidant activity6.61E-03
84GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity6.61E-03
85GO:0030247: polysaccharide binding8.10E-03
86GO:0030170: pyridoxal phosphate binding8.38E-03
87GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity8.60E-03
88GO:0030145: manganese ion binding1.04E-02
89GO:0004864: protein phosphatase inhibitor activity1.08E-02
90GO:0004568: chitinase activity1.08E-02
91GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.14E-02
92GO:0004177: aminopeptidase activity1.19E-02
93GO:0050661: NADP binding1.30E-02
94GO:0031072: heat shock protein binding1.44E-02
95GO:0016301: kinase activity1.50E-02
96GO:0008266: poly(U) RNA binding1.57E-02
97GO:0003774: motor activity1.57E-02
98GO:0016787: hydrolase activity1.64E-02
99GO:0005198: structural molecule activity1.66E-02
100GO:0004970: ionotropic glutamate receptor activity1.70E-02
101GO:0005217: intracellular ligand-gated ion channel activity1.70E-02
102GO:0004867: serine-type endopeptidase inhibitor activity1.70E-02
103GO:0004674: protein serine/threonine kinase activity1.88E-02
104GO:0001046: core promoter sequence-specific DNA binding1.98E-02
105GO:0003714: transcription corepressor activity1.98E-02
106GO:0051536: iron-sulfur cluster binding1.98E-02
107GO:0031418: L-ascorbic acid binding1.98E-02
108GO:0050660: flavin adenine dinucleotide binding2.32E-02
109GO:0005509: calcium ion binding2.42E-02
110GO:0004497: monooxygenase activity2.53E-02
111GO:0047134: protein-disulfide reductase activity2.90E-02
112GO:0016746: transferase activity, transferring acyl groups2.92E-02
113GO:0015035: protein disulfide oxidoreductase activity2.92E-02
114GO:0005451: monovalent cation:proton antiporter activity3.06E-02
115GO:0004871: signal transducer activity3.35E-02
116GO:0042803: protein homodimerization activity3.35E-02
117GO:0005355: glucose transmembrane transporter activity3.40E-02
118GO:0050662: coenzyme binding3.40E-02
119GO:0015299: solute:proton antiporter activity3.40E-02
120GO:0010181: FMN binding3.40E-02
121GO:0004791: thioredoxin-disulfide reductase activity3.40E-02
122GO:0016853: isomerase activity3.40E-02
123GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.48E-02
124GO:0004872: receptor activity3.57E-02
125GO:0015385: sodium:proton antiporter activity4.11E-02
126GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.11E-02
127GO:0008565: protein transporter activity4.24E-02
128GO:0016791: phosphatase activity4.30E-02
129GO:0008483: transaminase activity4.49E-02
130GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.49E-02
131GO:0019825: oxygen binding4.51E-02
132GO:0015297: antiporter activity4.66E-02
133GO:0016413: O-acetyltransferase activity4.68E-02
134GO:0051213: dioxygenase activity4.87E-02
135GO:0005516: calmodulin binding4.88E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0005794: Golgi apparatus3.64E-05
3GO:0005886: plasma membrane3.63E-04
4GO:0045252: oxoglutarate dehydrogenase complex3.70E-04
5GO:0005950: anthranilate synthase complex8.05E-04
6GO:0016021: integral component of membrane9.67E-04
7GO:0042406: extrinsic component of endoplasmic reticulum membrane1.30E-03
8GO:0030658: transport vesicle membrane1.88E-03
9GO:0005802: trans-Golgi network1.91E-03
10GO:0000813: ESCRT I complex3.23E-03
11GO:0000164: protein phosphatase type 1 complex3.23E-03
12GO:0031965: nuclear membrane4.43E-03
13GO:0031225: anchored component of membrane5.78E-03
14GO:0005788: endoplasmic reticulum lumen7.27E-03
15GO:0005779: integral component of peroxisomal membrane7.58E-03
16GO:0005768: endosome7.83E-03
17GO:0005789: endoplasmic reticulum membrane7.99E-03
18GO:0005783: endoplasmic reticulum9.51E-03
19GO:0005743: mitochondrial inner membrane1.03E-02
20GO:0017119: Golgi transport complex1.08E-02
21GO:0005618: cell wall1.11E-02
22GO:0005829: cytosol1.25E-02
23GO:0031012: extracellular matrix1.44E-02
24GO:0005795: Golgi stack1.70E-02
25GO:0070469: respiratory chain2.12E-02
26GO:0009506: plasmodesma2.76E-02
27GO:0005770: late endosome3.23E-02
28GO:0005777: peroxisome3.31E-02
29GO:0009504: cell plate3.57E-02
30GO:0019898: extrinsic component of membrane3.57E-02
31GO:0005623: cell3.64E-02
32GO:0009505: plant-type cell wall4.02E-02
33GO:0071944: cell periphery4.11E-02
34GO:0032580: Golgi cisterna membrane4.30E-02
35GO:0043231: intracellular membrane-bounded organelle4.61E-02
36GO:0048046: apoplast4.78E-02
37GO:0009705: plant-type vacuole membrane4.88E-02
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Gene type



Gene DE type