GO Enrichment Analysis of Co-expressed Genes with
AT1G09900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1900037: regulation of cellular response to hypoxia | 0.00E+00 |
| 2 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 3 | GO:0043039: tRNA aminoacylation | 6.44E-05 |
| 4 | GO:0006518: peptide metabolic process | 1.13E-04 |
| 5 | GO:0016255: attachment of GPI anchor to protein | 1.13E-04 |
| 6 | GO:0006424: glutamyl-tRNA aminoacylation | 1.69E-04 |
| 7 | GO:0016556: mRNA modification | 1.69E-04 |
| 8 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.65E-04 |
| 9 | GO:0009082: branched-chain amino acid biosynthetic process | 4.36E-04 |
| 10 | GO:0009099: valine biosynthetic process | 4.36E-04 |
| 11 | GO:0080186: developmental vegetative growth | 5.11E-04 |
| 12 | GO:0042255: ribosome assembly | 5.89E-04 |
| 13 | GO:0006353: DNA-templated transcription, termination | 5.89E-04 |
| 14 | GO:0009097: isoleucine biosynthetic process | 6.69E-04 |
| 15 | GO:0009657: plastid organization | 6.69E-04 |
| 16 | GO:1900865: chloroplast RNA modification | 8.38E-04 |
| 17 | GO:0010629: negative regulation of gene expression | 9.24E-04 |
| 18 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.11E-03 |
| 19 | GO:0006302: double-strand break repair | 1.30E-03 |
| 20 | GO:0006863: purine nucleobase transport | 1.50E-03 |
| 21 | GO:0051321: meiotic cell cycle | 1.83E-03 |
| 22 | GO:0007005: mitochondrion organization | 1.95E-03 |
| 23 | GO:0009658: chloroplast organization | 1.99E-03 |
| 24 | GO:0008654: phospholipid biosynthetic process | 2.80E-03 |
| 25 | GO:0006397: mRNA processing | 3.76E-03 |
| 26 | GO:0048364: root development | 3.76E-03 |
| 27 | GO:0048573: photoperiodism, flowering | 4.21E-03 |
| 28 | GO:0048481: plant ovule development | 4.52E-03 |
| 29 | GO:0048367: shoot system development | 8.93E-03 |
| 30 | GO:0009553: embryo sac development | 9.74E-03 |
| 31 | GO:0009451: RNA modification | 1.49E-02 |
| 32 | GO:0006470: protein dephosphorylation | 1.61E-02 |
| 33 | GO:0007166: cell surface receptor signaling pathway | 1.61E-02 |
| 34 | GO:0008380: RNA splicing | 1.66E-02 |
| 35 | GO:0006281: DNA repair | 3.07E-02 |
| 36 | GO:0008152: metabolic process | 3.29E-02 |
| 37 | GO:0009651: response to salt stress | 4.34E-02 |
| 38 | GO:0009555: pollen development | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004818: glutamate-tRNA ligase activity | 2.53E-05 |
| 2 | GO:0004160: dihydroxy-acid dehydratase activity | 2.53E-05 |
| 3 | GO:0008408: 3'-5' exonuclease activity | 5.82E-05 |
| 4 | GO:0016836: hydro-lyase activity | 2.30E-04 |
| 5 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.65E-04 |
| 6 | GO:0004519: endonuclease activity | 4.57E-04 |
| 7 | GO:0000049: tRNA binding | 1.11E-03 |
| 8 | GO:0031418: L-ascorbic acid binding | 1.61E-03 |
| 9 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.72E-03 |
| 10 | GO:0003727: single-stranded RNA binding | 2.18E-03 |
| 11 | GO:0004527: exonuclease activity | 2.55E-03 |
| 12 | GO:0004518: nuclease activity | 3.07E-03 |
| 13 | GO:0004722: protein serine/threonine phosphatase activity | 3.21E-03 |
| 14 | GO:0008237: metallopeptidase activity | 3.48E-03 |
| 15 | GO:0004222: metalloendopeptidase activity | 4.83E-03 |
| 16 | GO:0030145: manganese ion binding | 4.99E-03 |
| 17 | GO:0003697: single-stranded DNA binding | 5.31E-03 |
| 18 | GO:0051539: 4 iron, 4 sulfur cluster binding | 5.81E-03 |
| 19 | GO:0003690: double-stranded DNA binding | 7.97E-03 |
| 20 | GO:0019843: rRNA binding | 1.17E-02 |
| 21 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.19E-02 |
| 22 | GO:0008270: zinc ion binding | 1.23E-02 |
| 23 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.39E-02 |
| 24 | GO:0003824: catalytic activity | 1.42E-02 |
| 25 | GO:0042803: protein homodimerization activity | 2.73E-02 |
| 26 | GO:0016887: ATPase activity | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000791: euchromatin | 2.53E-05 |
| 2 | GO:0030870: Mre11 complex | 6.44E-05 |
| 3 | GO:0042765: GPI-anchor transamidase complex | 1.13E-04 |
| 4 | GO:0000795: synaptonemal complex | 2.95E-04 |
| 5 | GO:0005739: mitochondrion | 3.28E-04 |
| 6 | GO:0000785: chromatin | 3.07E-03 |
| 7 | GO:0009707: chloroplast outer membrane | 4.52E-03 |
| 8 | GO:0009507: chloroplast | 1.11E-02 |
| 9 | GO:0043231: intracellular membrane-bounded organelle | 3.29E-02 |