GO Enrichment Analysis of Co-expressed Genes with
AT1G09710
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 2 | GO:0071000: response to magnetism | 0.00E+00 |
| 3 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 4 | GO:1902025: nitrate import | 4.04E-05 |
| 5 | GO:0000012: single strand break repair | 4.04E-05 |
| 6 | GO:0072387: flavin adenine dinucleotide metabolic process | 4.04E-05 |
| 7 | GO:0090548: response to nitrate starvation | 4.04E-05 |
| 8 | GO:0000066: mitochondrial ornithine transport | 4.04E-05 |
| 9 | GO:0006419: alanyl-tRNA aminoacylation | 4.04E-05 |
| 10 | GO:1901529: positive regulation of anion channel activity | 1.00E-04 |
| 11 | GO:0010617: circadian regulation of calcium ion oscillation | 1.00E-04 |
| 12 | GO:0006432: phenylalanyl-tRNA aminoacylation | 1.00E-04 |
| 13 | GO:0099402: plant organ development | 1.00E-04 |
| 14 | GO:0080009: mRNA methylation | 1.00E-04 |
| 15 | GO:0006420: arginyl-tRNA aminoacylation | 1.00E-04 |
| 16 | GO:0010343: singlet oxygen-mediated programmed cell death | 1.00E-04 |
| 17 | GO:1901672: positive regulation of systemic acquired resistance | 1.73E-04 |
| 18 | GO:1902448: positive regulation of shade avoidance | 1.73E-04 |
| 19 | GO:1901332: negative regulation of lateral root development | 2.55E-04 |
| 20 | GO:1902347: response to strigolactone | 3.43E-04 |
| 21 | GO:0010117: photoprotection | 4.37E-04 |
| 22 | GO:0046283: anthocyanin-containing compound metabolic process | 4.37E-04 |
| 23 | GO:0010438: cellular response to sulfur starvation | 4.37E-04 |
| 24 | GO:0006465: signal peptide processing | 4.37E-04 |
| 25 | GO:1901371: regulation of leaf morphogenesis | 5.37E-04 |
| 26 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 5.37E-04 |
| 27 | GO:0060918: auxin transport | 5.37E-04 |
| 28 | GO:0009759: indole glucosinolate biosynthetic process | 5.37E-04 |
| 29 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 6.40E-04 |
| 30 | GO:0010310: regulation of hydrogen peroxide metabolic process | 6.40E-04 |
| 31 | GO:0006400: tRNA modification | 7.49E-04 |
| 32 | GO:0051510: regulation of unidimensional cell growth | 7.49E-04 |
| 33 | GO:0070413: trehalose metabolism in response to stress | 8.61E-04 |
| 34 | GO:0009827: plant-type cell wall modification | 9.77E-04 |
| 35 | GO:0000373: Group II intron splicing | 1.10E-03 |
| 36 | GO:1900426: positive regulation of defense response to bacterium | 1.22E-03 |
| 37 | GO:0009638: phototropism | 1.22E-03 |
| 38 | GO:0002213: defense response to insect | 1.63E-03 |
| 39 | GO:0009785: blue light signaling pathway | 1.77E-03 |
| 40 | GO:0010075: regulation of meristem growth | 1.77E-03 |
| 41 | GO:0006302: double-strand break repair | 1.92E-03 |
| 42 | GO:0000162: tryptophan biosynthetic process | 2.23E-03 |
| 43 | GO:0007010: cytoskeleton organization | 2.39E-03 |
| 44 | GO:0006289: nucleotide-excision repair | 2.39E-03 |
| 45 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.39E-03 |
| 46 | GO:0005992: trehalose biosynthetic process | 2.39E-03 |
| 47 | GO:0010073: meristem maintenance | 2.55E-03 |
| 48 | GO:0009793: embryo development ending in seed dormancy | 2.68E-03 |
| 49 | GO:0010118: stomatal movement | 3.61E-03 |
| 50 | GO:0045489: pectin biosynthetic process | 3.80E-03 |
| 51 | GO:0046323: glucose import | 3.80E-03 |
| 52 | GO:0042752: regulation of circadian rhythm | 3.99E-03 |
| 53 | GO:0009646: response to absence of light | 3.99E-03 |
| 54 | GO:0006508: proteolysis | 4.11E-03 |
| 55 | GO:0055114: oxidation-reduction process | 6.11E-03 |
| 56 | GO:0030244: cellulose biosynthetic process | 6.77E-03 |
| 57 | GO:0018298: protein-chromophore linkage | 6.77E-03 |
| 58 | GO:0010311: lateral root formation | 7.01E-03 |
| 59 | GO:0006811: ion transport | 7.25E-03 |
| 60 | GO:0010218: response to far red light | 7.25E-03 |
| 61 | GO:0009834: plant-type secondary cell wall biogenesis | 7.25E-03 |
| 62 | GO:0048527: lateral root development | 7.49E-03 |
| 63 | GO:0046686: response to cadmium ion | 7.55E-03 |
| 64 | GO:0009637: response to blue light | 7.99E-03 |
| 65 | GO:0006839: mitochondrial transport | 8.75E-03 |
| 66 | GO:0009640: photomorphogenesis | 9.53E-03 |
| 67 | GO:0010114: response to red light | 9.53E-03 |
| 68 | GO:0009644: response to high light intensity | 1.01E-02 |
| 69 | GO:0009636: response to toxic substance | 1.03E-02 |
| 70 | GO:0009416: response to light stimulus | 1.16E-02 |
| 71 | GO:0040008: regulation of growth | 2.15E-02 |
| 72 | GO:0007623: circadian rhythm | 2.22E-02 |
| 73 | GO:0009451: RNA modification | 2.26E-02 |
| 74 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.41E-02 |
| 75 | GO:0007166: cell surface receptor signaling pathway | 2.45E-02 |
| 76 | GO:0009409: response to cold | 3.18E-02 |
| 77 | GO:0009723: response to ethylene | 3.37E-02 |
| 78 | GO:0048366: leaf development | 3.41E-02 |
| 79 | GO:0005975: carbohydrate metabolic process | 3.56E-02 |
| 80 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.63E-02 |
| 81 | GO:0046777: protein autophosphorylation | 3.71E-02 |
| 82 | GO:0045454: cell redox homeostasis | 4.02E-02 |
| 83 | GO:0032259: methylation | 4.53E-02 |
| 84 | GO:0006281: DNA repair | 4.67E-02 |
| 85 | GO:0006397: mRNA processing | 4.81E-02 |
| 86 | GO:0009753: response to jasmonic acid | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity | 0.00E+00 |
| 2 | GO:0004222: metalloendopeptidase activity | 2.11E-05 |
| 3 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 4.04E-05 |
| 4 | GO:0004813: alanine-tRNA ligase activity | 4.04E-05 |
| 5 | GO:0005290: L-histidine transmembrane transporter activity | 4.04E-05 |
| 6 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 4.04E-05 |
| 7 | GO:0000049: tRNA binding | 4.67E-05 |
| 8 | GO:0031418: L-ascorbic acid binding | 9.13E-05 |
| 9 | GO:0000064: L-ornithine transmembrane transporter activity | 1.00E-04 |
| 10 | GO:0004826: phenylalanine-tRNA ligase activity | 1.00E-04 |
| 11 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.00E-04 |
| 12 | GO:0050736: O-malonyltransferase activity | 1.00E-04 |
| 13 | GO:0004814: arginine-tRNA ligase activity | 1.00E-04 |
| 14 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.73E-04 |
| 15 | GO:0016805: dipeptidase activity | 1.73E-04 |
| 16 | GO:0015181: arginine transmembrane transporter activity | 2.55E-04 |
| 17 | GO:0017172: cysteine dioxygenase activity | 2.55E-04 |
| 18 | GO:0009882: blue light photoreceptor activity | 2.55E-04 |
| 19 | GO:0015189: L-lysine transmembrane transporter activity | 2.55E-04 |
| 20 | GO:0005354: galactose transmembrane transporter activity | 2.55E-04 |
| 21 | GO:0008237: metallopeptidase activity | 3.14E-04 |
| 22 | GO:0070628: proteasome binding | 3.43E-04 |
| 23 | GO:0042277: peptide binding | 3.43E-04 |
| 24 | GO:0000293: ferric-chelate reductase activity | 5.37E-04 |
| 25 | GO:0031593: polyubiquitin binding | 5.37E-04 |
| 26 | GO:0004462: lactoylglutathione lyase activity | 5.37E-04 |
| 27 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.40E-04 |
| 28 | GO:0071949: FAD binding | 1.10E-03 |
| 29 | GO:0004805: trehalose-phosphatase activity | 1.35E-03 |
| 30 | GO:0043130: ubiquitin binding | 2.39E-03 |
| 31 | GO:0004176: ATP-dependent peptidase activity | 2.72E-03 |
| 32 | GO:0046872: metal ion binding | 3.09E-03 |
| 33 | GO:0004527: exonuclease activity | 3.80E-03 |
| 34 | GO:0008536: Ran GTPase binding | 3.80E-03 |
| 35 | GO:0005355: glucose transmembrane transporter activity | 3.99E-03 |
| 36 | GO:0019901: protein kinase binding | 4.19E-03 |
| 37 | GO:0003684: damaged DNA binding | 5.00E-03 |
| 38 | GO:0016791: phosphatase activity | 5.00E-03 |
| 39 | GO:0016597: amino acid binding | 5.42E-03 |
| 40 | GO:0016413: O-acetyltransferase activity | 5.42E-03 |
| 41 | GO:0004672: protein kinase activity | 7.00E-03 |
| 42 | GO:0050897: cobalt ion binding | 7.49E-03 |
| 43 | GO:0003697: single-stranded DNA binding | 7.99E-03 |
| 44 | GO:0004364: glutathione transferase activity | 9.27E-03 |
| 45 | GO:0003690: double-stranded DNA binding | 1.20E-02 |
| 46 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.35E-02 |
| 47 | GO:0004650: polygalacturonase activity | 1.41E-02 |
| 48 | GO:0016740: transferase activity | 1.41E-02 |
| 49 | GO:0030246: carbohydrate binding | 1.56E-02 |
| 50 | GO:0003723: RNA binding | 1.68E-02 |
| 51 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.80E-02 |
| 52 | GO:0015144: carbohydrate transmembrane transporter activity | 2.01E-02 |
| 53 | GO:0005524: ATP binding | 2.11E-02 |
| 54 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.12E-02 |
| 55 | GO:0005351: sugar:proton symporter activity | 2.19E-02 |
| 56 | GO:0008017: microtubule binding | 2.30E-02 |
| 57 | GO:0005506: iron ion binding | 2.31E-02 |
| 58 | GO:0042802: identical protein binding | 2.64E-02 |
| 59 | GO:0008168: methyltransferase activity | 2.95E-02 |
| 60 | GO:0003682: chromatin binding | 3.16E-02 |
| 61 | GO:0050660: flavin adenine dinucleotide binding | 3.37E-02 |
| 62 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.02E-02 |
| 63 | GO:0042803: protein homodimerization activity | 4.16E-02 |
| 64 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.34E-02 |
| 65 | GO:0004519: endonuclease activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016605: PML body | 1.73E-04 |
| 2 | GO:0016604: nuclear body | 1.22E-03 |
| 3 | GO:0005759: mitochondrial matrix | 2.12E-03 |
| 4 | GO:0009532: plastid stroma | 2.72E-03 |
| 5 | GO:0030529: intracellular ribonucleoprotein complex | 5.64E-03 |
| 6 | GO:0005856: cytoskeleton | 1.03E-02 |
| 7 | GO:0009570: chloroplast stroma | 1.30E-02 |
| 8 | GO:0005747: mitochondrial respiratory chain complex I | 1.35E-02 |
| 9 | GO:0009706: chloroplast inner membrane | 1.51E-02 |
| 10 | GO:0009507: chloroplast | 1.59E-02 |
| 11 | GO:0005739: mitochondrion | 1.79E-02 |
| 12 | GO:0005802: trans-Golgi network | 1.86E-02 |
| 13 | GO:0005768: endosome | 2.11E-02 |
| 14 | GO:0005874: microtubule | 3.45E-02 |
| 15 | GO:0031969: chloroplast membrane | 3.54E-02 |
| 16 | GO:0005789: endoplasmic reticulum membrane | 3.58E-02 |
| 17 | GO:0005743: mitochondrial inner membrane | 4.43E-02 |
| 18 | GO:0016021: integral component of membrane | 4.54E-02 |